Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq51150 87.8 2e-12 seq51149 87.8 2e-12 >seq51150 Length=3240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 151013 TCTTCATGGGCCCCATCTACTACCTGCGGCTGCGGCACCTCACGCAGGACAAGG-CCACG 151071 ||||||| || |||| |||||||| | ||||| |||| | | | |||||| |||| Sbjct 3189 TCTTCATCGGACCCACCTACTACCAGAGGCTGAAGCACATGGTGGACGACAAGATCCACT 3130 Query 151072 -GTGCGCTGCCGCGGCAAGAAGACCAAGCTGATCCGGCAGGCCAACGAGGGCCGCAAGCG 151130 | ||||| |||||| | | | || | ||||| || |||||||| ||| Sbjct 3129 CGCGCGCT--CGCGGCCCGGTGCAGATTCTCACGAGGCAGCCCGTGGAGGGCCGATCGCG 3072 Query 151131 AGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGCGACTGCCTCATCGCGCACGGCGCGGC 151190 | ||| || ||| |||||| |||||||||||||||||| | ||| | ||||||||||| Sbjct 3071 CGACGGTGGTCTCAGGTTCGGAGAGATGGAGCGCGACTGCATGATCTCCCACGGCGCGGC 3012 Query 151191 C 151191 | Sbjct 3011 C 3011 >seq51149 Length=3250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 151013 TCTTCATGGGCCCCATCTACTACCTGCGGCTGCGGCACCTCACGCAGGACAAGG-CCACG 151071 ||||||| || |||| |||||||| | ||||| |||| | | | |||||| |||| Sbjct 3199 TCTTCATCGGACCCACCTACTACCAGAGGCTGAAGCACATGGTGGACGACAAGATCCACT 3140 Query 151072 -GTGCGCTGCCGCGGCAAGAAGACCAAGCTGATCCGGCAGGCCAACGAGGGCCGCAAGCG 151130 | ||||| |||||| | | | || | ||||| || |||||||| ||| Sbjct 3139 CGCGCGCT--CGCGGCCCGGTGCAGATTCTCACGAGGCAGCCCGTGGAGGGCCGATCGCG 3082 Query 151131 AGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGCGACTGCCTCATCGCGCACGGCGCGGC 151190 | ||| || ||| |||||| |||||||||||||||||| | ||| | ||||||||||| Sbjct 3081 CGACGGTGGTCTCAGGTTCGGAGAGATGGAGCGCGACTGCATGATCTCCCACGGCGCGGC 3022 Query 151191 C 151191 | Sbjct 3021 C 3021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608336473519600