Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq60216 136 3e-27 seq60261 123 2e-23 seq41697 123 2e-23 seq40269 122 7e-23 seq58772 118 9e-22 seq54650 113 4e-20 seq49253 113 4e-20 seq56991 109 5e-19 seq56944 105 6e-18 seq17665 105 6e-18 seq43031 98.7 8e-16 seq26146 98.7 8e-16 seq53109 96.9 3e-15 seq52280 96.9 3e-15 seq58957 84.2 2e-11 seq40434 84.2 2e-11 seq39581 84.2 2e-11 seq39580 84.2 2e-11 >seq60216 Length=3196 Score = 136 bits (150), Expect = 3e-27 Identities = 172/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || ||||| | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 912 GTTGCCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 971 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| || ||||||| ||||| ||||| ||| | || || | |||||||||| Sbjct 972 GGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGG 1031 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | ||| |||||||| |||||||| ||||| | ||| || | ||| |||| Sbjct 1032 GGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATCGTGT--CCGAGCTC 1089 Query 21125 -CG-TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | ||| || ||||||||||| | ||| ||||| || || ||||| Sbjct 1090 TCGACCTCGAGGGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 1142 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | || | ||| |||||||| || ||||| |||||||| Sbjct 1826 CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCG 1885 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | |||||| || ||| Sbjct 1886 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGG 1945 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || ||||| | ||| || || | ||| Sbjct 1946 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGACGACTCGACC 2005 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| ||||||||||| || | || || || || ||||||||| Sbjct 2006 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 2053 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||| ||||| ||||| |||||||| || ||||||| ||||| || || Sbjct 1411 GTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCA 1470 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | || |||||||| |||||| || ||| Sbjct 1471 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTC 1530 Query 21099 AC 21100 || Sbjct 1531 AC 1532 >seq60261 Length=7311 Score = 123 bits (136), Expect = 2e-23 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| ||||| || || ||||||| ||||| ||||| Sbjct 1234 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 1293 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | ||| |||||||| ||||||||| ||| Sbjct 1294 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTC 1353 Query 21099 ACCTGGCCGACAGTATCACCGGGCTC-CG-TTTCCACGGTAATGGTCTTGCCGGTTAACG 21156 || | ||| || | ||| |||| || || | |||||||||||||||||| | || Sbjct 1354 ACGTTCTCGATTGTGT--CCGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCG 1411 Query 21157 TTTTGACAAATATTTGCAT 21175 | ||||| || || ||||| Sbjct 1412 TCTTGACGAAGATCTGCAT 1430 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| || | || | ||| |||||||| || ||||| ||||| Sbjct 972 GTTGCCACCACGAAGGCGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 1031 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| | ||||||| ||||| ||||| || | || || | |||||| || Sbjct 1032 GGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGG 1091 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||| |||||||| |||||| || ||||| | ||| || ||| | ||| Sbjct 1092 AGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCAGATGACTC 1151 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || || || || || ||||| Sbjct 1152 GACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 1202 Score = 98.7 bits (108), Expect = 8e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | || | ||| |||||||| || ||||| ||||| ||| Sbjct 1705 CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 1764 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| ||||| || | ||||| | ||||||||| || Sbjct 1765 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGCGGG 1824 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCAC 21100 | |||||||||||| |||||| || ||||| Sbjct 1825 ATGCCTTCCTTGTCTTGGATCTTCTGCTTCAC 1856 >seq41697 Length=921 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | || | |||||||||||| || ||||| ||||| ||| Sbjct 2 CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 61 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| ||| | || || | ||||||||| || Sbjct 62 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGAGGG 121 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || ||||| | ||| || || | || ||| Sbjct 122 ATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCAACC 181 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || || || || || |||||| Sbjct 182 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 229 >seq40269 Length=983 Score = 122 bits (134), Expect = 7e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 217 GTTGCCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 158 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| ||||| | ||||||| ||||| ||||| || | || || | |||||||||| Sbjct 157 CGCGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGG 98 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | ||| |||||||| |||||| || ||||| | ||| || || | || ||| Sbjct 97 GGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTC 38 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTG 21161 || | ||| |||||||||||||| | ||| ||| Sbjct 37 GACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTG 1 >seq58772 Length=3437 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || || || | ||||||| ||||| ||||| Sbjct 1819 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCAAGCTGCTTGCCG 1760 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || ||| | ||| |||||||| |||||| || ||| Sbjct 1759 GCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 1700 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| |||||| | | ||| || | ||| |||||||||||||| | ||| Sbjct 1699 ACGTTCTCGATAGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTC 1640 Query 21159 TTGACAAATATTTGCATT 21176 ||||| || || |||||| Sbjct 1639 TTGACGAAGATCTGCATT 1622 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 2309 GTTGCCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 2250 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||||| || | ||||||| ||||| ||||| || | || || | |||||| || Sbjct 2249 GGCCAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGG 2190 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||| |||||||| |||||| || ||||| | ||| ||| || | ||| Sbjct 2189 AGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCGGAGCTCTC 2130 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||||||||||||||| | || ||||| || || ||||| Sbjct 2129 GACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2079 >seq54650 Length=1408 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 1401 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1342 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || || | ||||||||| ||| Sbjct 1341 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 1282 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || ||||| | ||| || || | | ||| Sbjct 1281 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACC 1222 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| ||||||||||| || | || || || || |||||||| || Sbjct 1221 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATGTT 1172 >seq49253 Length=1508 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||| ||||| ||||| |||||||| || ||||||| ||||| ||||| Sbjct 1336 GTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1277 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || ||| | || |||||||| ||||||||| ||| Sbjct 1276 GCGAAGATGAGGCGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTC 1217 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | ||| || | ||| |||||||||||||| | || Sbjct 1216 ACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 1157 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 1156 TTCACGAAGATCTGCAT 1140 >seq56991 Length=1928 Score = 109 bits (120), Expect = 5e-19 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | |||||| | || | || |||||||| || ||||| ||||| Sbjct 863 GTTGCCACCACGGAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 922 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| | ||||||| ||||| ||||| || | || || | |||||| || Sbjct 923 AGCCAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGG 982 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||| |||||||| |||||| || ||||| | ||| || || || |||| Sbjct 983 CGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTC--CGAGCTC 1040 Query 21125 -CGTT-TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | ||| |||||||||||||| | ||| || || || || ||||| Sbjct 1041 TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1093 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | || |||||||| || ||||| ||||| || Sbjct 1095 CCACCACGGAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1154 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 1155 AGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 1214 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || ||||| | ||| || || | || ||| Sbjct 1215 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCAACC 1274 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || || || || || |||||| Sbjct 1275 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 1322 >seq56944 Length=8418 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | || | ||| |||||||| || ||||| ||||| ||| Sbjct 7189 CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 7130 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| || || || | || || | |||||| || ||| Sbjct 7129 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCAGGGGGG 7070 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| || ||||| | ||| || || | ||| Sbjct 7069 ATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGGACGACTCGACC 7010 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || ||||| || || |||||| Sbjct 7009 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 6962 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 7649 GTTGCCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 7590 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||||| || || ||||||| ||||| ||||| ||| | || || | ||||||||| Sbjct 7589 GGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGG 7530 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | || |||||||| |||||| || || || | ||| || || | ||| Sbjct 7529 AGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTC 7470 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| ||||| | || ||||| || || ||||| Sbjct 7469 GACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 7419 >seq17665 Length=187 Score = 105 bits (116), Expect = 6e-18 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 20987 CTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAAT 21046 ||| || ||||| ||||| || ||||| || ||||||| ||||| ||||| || | || Sbjct 1 CTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGAT 60 Query 21047 AAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCC 21106 || | |||||||||| ||| | ||| |||||||| |||||| || || || | | Sbjct 61 GAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTC 120 Query 21107 GACAGTATCACCGGGCTC-CGTT-TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACA 21164 || || || || |||| || || | |||||||||||||||||| | ||| ||||| Sbjct 121 GATCGTGTC--CGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACG 178 Query 21165 AATATTTGC 21173 || || ||| Sbjct 179 AAGATCTGC 187 >seq43031 Length=7181 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| |||||||| || || || ||||| || || || || ||||||| ||||| ||||| Sbjct 18 AGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCC 77 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | || || | |||||| || || | ||| |||||||| |||||||| || Sbjct 78 AGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTTTGCTT 137 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | ||| || || | || ||| || | ||| |||||||||||||| | || Sbjct 138 CACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 197 Query 21158 TTTGACAAATATTTGCATT 21176 || || || || |||||| Sbjct 198 CTTCACGAAGATCTGCATT 216 >seq26146 Length=139 Score = 98.7 bits (108), Expect = 8e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| |||||||| || ||||||| ||||| ||||| Sbjct 17 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCG 76 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | ||||| | ||||||||| || | ||| |||||||| |||||| || ||| Sbjct 77 GCGAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 136 Query 21099 AC 21100 || Sbjct 137 AC 138 >seq53109 Length=5902 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 || || | |||||| | || | ||||||||||| || ||||| ||||| ||||| || Sbjct 4682 CGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTG 4623 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCT 21074 || ||||||| ||||| |||||||| | || || | ||||||||| || | ||| Sbjct 4622 CGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCC 4563 Query 21075 TCCTTGTCGGCGATCTTTTGTTTCAC 21100 |||||||| |||||| || ||||| Sbjct 4562 TCCTTGTCCTGGATCTTCTGCTTCAC 4537 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| |||||||| | | ||||| ||||| || || Sbjct 4433 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCATCCTCGAGCTGCTTACCG 4374 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || || | ||| |||||||| |||||| || || Sbjct 4373 GCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTT 4314 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | | ||| || | ||| || ||||||||||| | || Sbjct 4313 ACGTTCTCGATGGTGTCGCTCGACTCTACCTCGAGGGTGATCGTCTTGCCGGTCAGGGTC 4254 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 4253 TTGACGAAGATCTGCAT 4237 >seq52280 Length=2070 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 1895 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1836 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| ||||| || | || || | ||||||||| ||| Sbjct 1835 AGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 1776 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || ||||| | ||| || || | | ||| Sbjct 1775 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACC 1716 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| ||||||||||| || | || || || || || |||||| Sbjct 1715 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 1668 Score = 93.3 bits (102), Expect = 4e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 21002 GTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061 ||| |||||||| | ||||||| ||||| ||||| || | ||||| | ||||||||| Sbjct 2070 GTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTC 2011 Query 21062 CACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGG 21121 || | |||||||||||| |||||| || ||||| | ||| || ||| | Sbjct 2010 GGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCAGACGA 1951 Query 21122 CTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| || | ||||||||||||||||| | || ||||| || || ||||| Sbjct 1950 CTCGACCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1897 >seq58957 Length=2547 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/122 (75%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| |||||||| | |||||| ||||| ||||| Sbjct 379 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGT---GCGGTCCTCAAGCTGCTTGCCG 323 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | ||| |||||||| |||||| || ||| Sbjct 322 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 263 Query 21099 AC 21100 || Sbjct 262 AC 261 >seq40434 Length=1363 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 21000 TAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGG 21059 ||||| || || || || ||||||| ||||| ||||| || | || || | ||||||| Sbjct 2 TAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 61 Query 21060 TCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCG 21119 || ||| | ||| |||||||| |||||| || ||||| | ||| || || | Sbjct 62 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTC 121 Query 21120 GGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 | ||| || | ||| ||||||||||| || | || || || || |||||||| || Sbjct 122 GACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATGTT 180 >seq39581 Length=1244 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/122 (75%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| |||||||| | |||||| ||||| ||||| Sbjct 997 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGT---GCGGTCCTCAAGCTGCTTGCCG 941 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | ||| |||||||| |||||| || ||| Sbjct 940 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 881 Query 21099 AC 21100 || Sbjct 880 AC 879 >seq39580 Length=1361 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/122 (75%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| |||||||| | |||||| ||||| ||||| Sbjct 1114 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGT---GCGGTCCTCAAGCTGCTTGCCG 1058 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | ||| |||||||| |||||| || ||| Sbjct 1057 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 998 Query 21099 AC 21100 || Sbjct 997 AC 996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421947901280840