Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq56991 141 1e-28 seq58772 140 4e-28 seq54650 140 4e-28 seq52280 138 1e-27 seq53109 134 2e-26 seq60261 132 5e-26 seq56944 132 5e-26 seq41697 132 5e-26 seq40434 127 2e-24 seq40269 125 8e-24 seq60216 118 1e-21 seq17665 114 1e-20 seq45129 100 3e-16 seq26255 96.9 4e-15 seq25456 93.3 5e-14 seq58957 91.5 2e-13 seq39581 91.5 2e-13 seq39580 91.5 2e-13 seq5343 91.5 2e-13 seq26146 89.7 6e-13 seq15070 89.7 6e-13 seq15432 86.0 7e-12 seq51760 82.4 9e-11 seq51759 82.4 9e-11 seq51550 82.4 9e-11 seq51549 82.4 9e-11 >seq56991 Length=1928 Score = 141 bits (156), Expect = 1e-28 Identities = 149/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 1130 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAA 1189 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || || || | | Sbjct 1190 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1249 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 1250 CTCGATCGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1309 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 1310 GAAGATCTGCATTGTT 1325 >seq58772 Length=3437 Score = 140 bits (154), Expect = 4e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| || ||||| Sbjct 2042 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1983 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 1982 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1923 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||| ||| || || |||| ||||| || |||||||| || ||||| || Sbjct 1922 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 1863 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 1862 GAAGATCTGCAT 1851 >seq54650 Length=1408 Score = 140 bits (154), Expect = 4e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 1366 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1307 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 1306 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1247 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 1246 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1187 Query 43172 AAAGATTTGCAtttt 43186 ||||||||||| || Sbjct 1186 GAAGATTTGCATGTT 1172 >seq52280 Length=2070 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 1860 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 1801 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || || | | Sbjct 1800 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1741 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| |||||||| ||||| || || ||||| || Sbjct 1740 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1681 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 1680 GAAGATCTGCATTGTT 1665 Score = 105 bits (116), Expect = 8e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || ||||| || || |||| || |||||||| || ||||| || || |||||||||||| Sbjct 2069 TCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCG 2010 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT 43130 | || | || ||||||||| ||| || || || | || | | |||||| ||| Sbjct 2009 GGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCAGACGAC 1950 Query 43131 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 || || |||| || ||||| ||||| || || ||||| || ||||| ||||| Sbjct 1949 TCGACCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1897 >seq53109 Length=5902 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || ||||||||||| ||||| Sbjct 4428 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCATCCTCGAGCTGCTTACCGGCGAA 4369 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | || |||||||||| ||| || || || | | Sbjct 4368 GATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTTACGTT 4309 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||||| || || |||| ||||| || ||||| || || ||||| || Sbjct 4308 CTCGATGGTGTCGCTCGACTCTACCTCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTGAC 4249 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 4248 GAAGATCTGCAT 4237 Score = 127 bits (140), Expect = 2e-24 Identities = 143/191 (75%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| || ||||| Sbjct 4653 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 4594 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 4593 GATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 4534 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||||||| || || || |||| ||||| || | |||| || ||||| || Sbjct 4533 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATTGTCT---CCGTGAGGGTCTTCAC 4477 Query 43172 AAAGATTTGCA 43182 ||||| |||| Sbjct 4476 GAAGATCTGCA 4466 >seq60261 Length=7311 Score = 132 bits (146), Expect = 5e-26 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| || ||||| Sbjct 1239 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1298 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| ||||| || | | Sbjct 1299 GATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 1358 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| || ||||| ||||| || |||||||| Sbjct 1359 CTCGATTGTGTCCGAGCTC---TCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTT 1415 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 1416 GACGAAGATCTGCAT 1430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 1740 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 1799 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || || ||||||||||||| ||| | || |||||||| Sbjct 1800 GATAAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTC 1838 >seq56944 Length=8418 Score = 132 bits (146), Expect = 5e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || ||||||||||||||||| Sbjct 7154 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 7095 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | || ||||||||| || || || || | | Sbjct 7094 GATGAGGCGCTGCTGATCAGGGGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTT 7035 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || || |||| |||||||| ||||| || || ||||| || Sbjct 7034 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 6975 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 6974 GAAGATCTGCATTGTT 6959 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || ||||||||||| ||||| Sbjct 7382 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAA 7323 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 7322 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 7263 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || || |||| ||||| || || || || || ||||| || Sbjct 7262 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGAC 7203 Query 43172 AAAGATTTGCAt 43183 ||||| ||||| Sbjct 7202 GAAGATCTGCAT 7191 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || |||| || |||||||| ||||| || Sbjct 7610 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAA 7551 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || |||| | Sbjct 7550 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 7491 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 7490 CTCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTT 7434 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 7433 GACGAAGATCTGCAT 7419 >seq41697 Length=921 Score = 132 bits (146), Expect = 5e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || || || Sbjct 37 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 96 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| || || || || | | Sbjct 97 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 156 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 157 CTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 216 Query 43172 AAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 217 GAAGATCTGCATTGTT 232 >seq40434 Length=1363 Score = 127 bits (140), Expect = 2e-24 Identities = 136/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 43007 GTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTG 43066 ||| || || || || || |||| || |||||||| || ||||| ||||| |||||||| Sbjct 1 GTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTG 60 Query 43067 GTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCT 43126 ||| | || | || |||||||||| ||| || || || | || | | |||||||| Sbjct 61 GTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCT 120 Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAtttt 43186 ||| || || |||| |||||||| ||||| || || ||||| || ||||||||||| || Sbjct 121 CGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATGTT 180 >seq40269 Length=983 Score = 125 bits (138), Expect = 8e-24 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 178 CTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 119 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || || | | Sbjct 118 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 59 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||||||| || || || |||| |||||||| ||||| || |||||||| Sbjct 58 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTT 2 >seq60216 Length=3196 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || || || Sbjct 951 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 1010 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| || ||||| || | | Sbjct 1011 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTTTGCTTCACGTT 1070 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| |||| || || |||| ||||| || ||||| || |||||||| Sbjct 1071 CTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATCGTCTTGCCGGTCAGCGTCTT 1127 Query 43169 TACAAAGATTTGCAt 43183 || ||||| ||||| Sbjct 1128 GACGAAGATCTGCAT 1142 Score = 102 bits (112), Expect = 9e-17 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || ||||| || || |||| || ||||||||||||||||| Sbjct 1416 CTCCTTTTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 1475 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| ||||||||||||| || | | |||||||||| ||| || || || Sbjct 1476 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTT 1529 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/150 (75%), Gaps = 6/150 (4%) Strand=Plus/Plus Query 43037 CTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGAT 43096 |||||| || ||||| ||||| ||||||||||||| || | || |||||||||| ||| Sbjct 1678 CTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGAT 1737 Query 43097 TTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||||| || | || | | ||||| |||| || || |||| |||||||| || Sbjct 1738 CTTTTGCTTCACGTTCTCGATAGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTT 1794 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 || || |||||||| || ||||| ||||| Sbjct 1795 ACCGGTCAGCGTCTTCACGAAGATCTGCAT 1824 >seq17665 Length=187 Score = 114 bits (126), Expect = 1e-20 Identities = 140/190 (74%), Gaps = 6/190 (3%) Strand=Plus/Plus Query 42995 CTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATAT 43054 ||| || || ||||| || || || || || |||| || |||||||| |||||||| || Sbjct 1 CTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGAT 60 Query 43055 GAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGC 43114 ||| ||||||||||| | || | || |||||||||| ||| || || |||| | | Sbjct 61 GAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTC 120 Query 43115 CACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | |||||| |||| || || |||| || ||||| ||||| || |||||||| || Sbjct 121 GATCGTGTCCGAGCTC---TCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGAC 177 Query 43172 AAAGATTTGC 43181 ||||| ||| Sbjct 178 GAAGATCTGC 187 >seq45129 Length=6669 Score = 100 bits (110), Expect = 3e-16 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCC-GCTCGTCATCTAGCTGCTTACCAGCGA 43050 |||||| || || ||||| || |||||||| | ||| ||| || |||||||| || || Sbjct 1272 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCAGCT-GTCCTCAAGCTGCTTGCCCATGA 1330 Query 43051 ATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG 43110 | ||||| ||||||||||| | || | || |||||||||| ||| || || || | Sbjct 1331 AGATGAGGCGCTGCTGGTCAGGAGGGATGC-CTCCTTGTCCTGGATCTTCTGCTTCATGT 1389 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | | ||||||| || | || | || ||||| || | |||| || ||||||| Sbjct 1390 TCTCAATCATGTCGCTGGACTTGACCTTGAGGGTGATTGTCT---CCGTGAGGGTCTTTA 1446 Query 43171 CAAAGATTTGCAttttt 43187 ||||| |||||| || Sbjct 1447 TGAAGATCTGCATTGTT 1463 >seq26255 Length=175 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||||| || | || || ||||||||||||||||| Sbjct 37 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAA 96 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| |||| || | || |||||||||| || || || || | | Sbjct 97 GATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 156 Query 43112 CGCCACCGTGTCGCTCGA 43129 | | | |||||||| || Sbjct 157 CTCGATGGTGTCGCTGGA 174 >seq25456 Length=127 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || ||||||||||| ||||| Sbjct 118 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAA 59 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| |||||||| || | ||| | || |||||||||| ||| || || || Sbjct 58 GATGAGGCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 5 >seq58957 Length=2547 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/114 (78%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || || ||| |||||||| || ||||| Sbjct 374 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGTCCTCA---AGCTGCTTGCCGGCGAA 318 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| ||||||||||||| ||| | || |||||||||| ||| || || || Sbjct 317 GATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 264 >seq39581 Length=1244 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/114 (78%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || || ||| |||||||| || ||||| Sbjct 992 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGTCCTCA---AGCTGCTTGCCGGCGAA 936 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| ||||||||||||| ||| | || |||||||||| ||| || || || Sbjct 935 GATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 882 >seq39580 Length=1361 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/114 (78%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || || ||| |||||||| || ||||| Sbjct 1109 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGTCCTCA---AGCTGCTTGCCGGCGAA 1053 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| ||||||||||||| ||| | || |||||||||| ||| || || || Sbjct 1052 GATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 999 >seq5343 Length=175 Score = 91.5 bits (100), Expect = 2e-13 Identities = 127/177 (72%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 42995 CTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATAT 43054 ||| || || ||||| || || || || || |||| || |||||||| |||||||| || Sbjct 1 CTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGAT 60 Query 43055 GAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGC 43114 ||| ||||||||||||| || | | |||||||||| ||| || || || | || | Sbjct 61 GAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTC 120 Query 43115 CACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | ||||| |||| || || |||| ||||| || || || || || ||||| Sbjct 121 GATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTT 174 >seq26146 Length=139 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 22 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 81 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 || || ||||||||||||| || | || |||||||||| ||| || || || Sbjct 82 GATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 135 >seq15070 Length=127 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 10 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 69 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 || || ||||||||||||| || | || |||||||||| ||| || || || Sbjct 70 GATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 123 >seq15432 Length=160 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| ||||| ||||||||||||| || | | |||||||||| ||| || || || Sbjct 159 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTC 100 Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 | || | | || ||||| || || || |||| ||||| || || ||||| || ||| Sbjct 99 ACATTCTCGATAGTATCGCTGGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTC 40 Query 43167 TTTACAAAGATTTGCAt 43183 || || ||||| ||||| Sbjct 39 TTGACGAAGATCTGCAT 23 >seq51760 Length=15751 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||| ||| || ||||| || || || || | |||| || |||||||| || Sbjct 9533 GTGCTCTCCGGTTGGATGTTGTAGTCGGCTAGCGTGCAGCCGTCCTCGAGCTGCTTGCCG 9592 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| || || ||||||||||||| ||| | || |||| ||||| Sbjct 9593 GCGAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCATGTCC 9637 >seq51759 Length=15791 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||| ||| || ||||| || || || || | |||| || |||||||| || Sbjct 9573 GTGCTCTCCGGTTGGATGTTGTAGTCGGCTAGCGTGCAGCCGTCCTCGAGCTGCTTGCCG 9632 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| || || ||||||||||||| ||| | || |||| ||||| Sbjct 9633 GCGAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCATGTCC 9677 >seq51550 Length=20375 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||| ||| || ||||| || || || || | |||| || |||||||| || Sbjct 2629 GTGCTCTCCGGTTGGATGTTGTAGTCGGCTAGCGTGCAGCCGTCCTCGAGCTGCTTGCCG 2688 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| || || ||||||||||||| ||| | || |||| ||||| Sbjct 2689 GCGAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCATGTCC 2733 >seq51549 Length=20383 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||| ||| || ||||| || || || || | |||| || |||||||| || Sbjct 2629 GTGCTCTCCGGTTGGATGTTGTAGTCGGCTAGCGTGCAGCCGTCCTCGAGCTGCTTGCCG 2688 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 ||||| || || ||||||||||||| ||| | || |||| ||||| Sbjct 2689 GCGAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCATGTCC 2733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571385234417200