Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq41697 129 5e-25 seq60216 122 7e-23 seq58772 111 1e-19 seq56991 111 1e-19 seq60261 107 2e-18 seq40269 107 2e-18 seq56944 105 5e-18 seq49253 100 2e-16 seq43031 98.7 8e-16 seq53109 96.9 3e-15 seq26146 96.9 3e-15 seq54650 93.3 3e-14 seq52280 89.7 4e-13 seq17665 87.8 1e-12 seq58257 82.4 6e-11 seq48430 82.4 6e-11 seq47236 82.4 6e-11 >seq41697 Length=921 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 26 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 85 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| ||||| ||| | |||||| ||||| ||| | | Sbjct 86 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 145 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | ||||||||| || ||||| Sbjct 146 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTG 205 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||||||| Sbjct 206 AGGGTCTTCACGAAGATCTGCATT 229 >seq60216 Length=3196 Score = 122 bits (134), Expect = 7e-23 Identities = 152/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 940 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 999 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| |||||| || | |||||| ||||| ||| | Sbjct 1000 TTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTT 1059 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910 |||||||| | | | |||| ||| |||| || || | |||||| || || |||| Sbjct 1060 TGCTTCACGTTCTCGATCGTGT--CCGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGG 1117 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| ||||| || |||||||| Sbjct 1118 TCAGCGTCTTGACGAAGATCTGCAT 1142 >seq58772 Length=3437 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || |||||||||||||| | || ||||||| | || Sbjct 1825 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCAAGCTGC 1766 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || || | |||||| ||||| || | | Sbjct 1765 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1706 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||| |||| | ||| || | ||||||||| || |||||| Sbjct 1705 TGCTTCACGTTCTCGATAGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 1646 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 ||||| ||||| || ||||||||| Sbjct 1645 AGCGTCTTGACGAAGATCTGCATT 1622 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || |||||||||||||||| || ||||||| | || Sbjct 2281 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGACCGTCCTCAAGCTGC 2222 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || ||| | |||||| ||||| || | | Sbjct 2221 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 2162 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | ||| ||||| || |||||| Sbjct 2161 TGCTTCACGTTCTCGATAGTGTCGGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTC 2102 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 2101 AGGGTCTTGACGAAGATCTGCAT 2079 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| || | ||||||| | || Sbjct 2053 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 1994 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| || | |||||| ||||| || | | Sbjct 1993 TTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1934 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| | ||| || | |||||| || || || || Sbjct 1933 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTG 1874 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 1873 AGGGTCTTCACGAAGATCTGCAT 1851 >seq56991 Length=1928 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || |||||||||||||| | ||| ||||||| | || Sbjct 1119 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGACCGTCCTCGAGCTGC 1178 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 1179 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1238 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | ||||||||| || ||||| Sbjct 1239 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTG 1298 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||||||| Sbjct 1299 AGGGTCTTCACGAAGATCTGCATT 1322 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || ||||||||||| |||| ||| ||||||| | || Sbjct 891 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTACGACCGTCCTCGAGCTGC 950 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || || | |||||| ||||| || | | Sbjct 951 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTC 1010 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910 |||||||| | | | |||| ||| |||| || || | ||||||||| || |||| Sbjct 1011 TGCTTCACGTTCTCGATGGTGT--CCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGG 1068 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || || || |||||||| Sbjct 1069 TCAGCGTCTTCACGAAGATCTGCAT 1093 >seq60261 Length=7311 Score = 107 bits (118), Expect = 2e-18 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||||| || | ||||||| | || Sbjct 1228 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 1287 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | |||||| ||||| || | Sbjct 1288 TTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTT 1347 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910 |||||||| | | | |||| ||| |||| || || | ||| ||||| || |||| Sbjct 1348 TGCTTCACGTTCTCGATTGTGT--CCGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGG 1405 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| ||||| || |||||||| Sbjct 1406 TCAGCGTCTTGACGAAGATCTGCAT 1430 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| ||||||| | || Sbjct 1000 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCGAGCTGC 1059 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || ||| | |||||| ||||| || | | Sbjct 1060 TTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1119 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||| | ||| || | ||||||||| || ||||| Sbjct 1120 TGCTTCACGTTCTCGATCGTGTCAGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 1179 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 1180 AGGGTCTTCACGAAGATCTGCAT 1202 >seq40269 Length=983 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || ||||||||||| || | ||| ||||||| | || Sbjct 189 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGACCGTCCTCGAGCTGC 130 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| |||||| || | |||||| ||||| || | | Sbjct 129 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 70 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | ||||||||| || |||||| Sbjct 69 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 10 Query 16913 AGCGTTTTG 16921 ||||| ||| Sbjct 9 AGCGTCTTG 1 >seq56944 Length=8418 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||||| || | ||||||| | || Sbjct 7621 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 7562 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| ||||| ||| | ||||| ||||| || | | Sbjct 7561 TTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 7502 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | |||||| | ||| || | |||||| || || |||||| Sbjct 7501 TGCTTGACGTTCTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCGGTC 7442 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 7441 AGGGTCTTGACGAAGATCTGCAT 7419 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| || | ||||||| | || Sbjct 7165 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 7106 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| || || || | ||| || ||||| ||| | | Sbjct 7105 TTACCAGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCTTCCTTGTCCTGAATCTTC 7046 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| | ||| || | ||||||||| || |||||| Sbjct 7045 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 6986 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| || ||||||||| Sbjct 6985 AGGGTCTTGACGAAGATCTGCATT 6962 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 7393 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 7334 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| || | ||||| ||||| || | | Sbjct 7333 TTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 7274 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | |||||| | ||| || | |||||| || || |||||| Sbjct 7273 TGCTTGACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCGGTC 7214 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 7213 AGGGTCTTGACGAAGATCTGCAT 7191 >seq49253 Length=1508 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||||||||||||||| |||||||||||||||| ||| | ||||||| | || Sbjct 1342 TGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 1283 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || || | ||||| ||||| || | Sbjct 1282 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTT 1223 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| | ||| || | ||||||||| || ||||| Sbjct 1222 TGCTTCACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 1163 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 1162 AGGGTCTTCACGAAGATCTGCAT 1140 >seq43031 Length=7181 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || || ||||||||||| | || | ||||||| | || Sbjct 13 TGGAGAGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 72 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| || || ||| | |||||| ||||| ||| | Sbjct 73 TTGCCAGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTT 132 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | ||||||||| || ||||| Sbjct 133 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 192 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||||||| Sbjct 193 AGGGTCTTCACGAAGATCTGCATT 216 >seq53109 Length=5902 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/202 (71%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||||| || | ||||||| | || Sbjct 4664 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 4605 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 |||||||| | || || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 4604 TTGCCCGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTC 4545 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| || ||| || | |||||| || | | || Sbjct 4544 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATTGTCT---CCGTG 4488 Query 16913 AGCGTTTTGACAAAAATCTGCA 16934 || || || || || ||||||| Sbjct 4487 AGGGTCTTCACGAAGATCTGCA 4466 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||| | || Sbjct 4439 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCATCCTCGAGCTGC 4380 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| || || ||| | |||||| ||||| || | | Sbjct 4379 TTACCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 4320 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||||| || | | | ||||||| | ||| || | |||||| || || |||||| Sbjct 4319 TGCTTTACGTTCTCGATGGTGTCGCTCGACTCTACCTCGAGGGTGATCGTCTTGCCGGTC 4260 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 4259 AGGGTCTTGACGAAGATCTGCAT 4237 >seq26146 Length=139 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 11 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGC 70 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | ||||| ||||| ||||| ||| | |||||| ||||| || | | Sbjct 71 TTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 130 Query 16853 TGCTTCAC 16860 |||||||| Sbjct 131 TGCTTCAC 138 >seq54650 Length=1408 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | || | ||||||| | || Sbjct 1377 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 1318 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| || | |||||| ||||| || | | Sbjct 1317 TTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1258 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | ||||||||| || || ||| Sbjct 1257 TGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTC 1198 Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938 || || || || || || ||||| || Sbjct 1197 AGGGTCTTCACGAAGATTTGCATGTT 1172 >seq52280 Length=2070 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | || ||||||| | || Sbjct 1871 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGC 1812 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| || | ||||| ||||| || | | Sbjct 1811 TTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 1752 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||||| | ||| || | ||||||||| || || ||| Sbjct 1751 TGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTC 1692 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||||||| Sbjct 1691 AGGGTCTTCACGAAGATCTGCATT 1668 >seq17665 Length=187 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 16747 CTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAAT 16806 ||| || |||||||||||||| | ||| | ||||||| | || ||||| || | || Sbjct 1 CTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGAT 60 Query 16807 AAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCC 16866 || ||||| |||||| || | |||||| ||||| || | |||||| || | | Sbjct 61 GAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTC 120 Query 16867 CACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACA 16924 | |||| ||| |||| || || | ||| ||||| || ||||||||||| ||||| Sbjct 121 GATCGTGT--CCGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACG 178 Query 16925 AAAATCTGC 16933 || |||||| Sbjct 179 AAGATCTGC 187 >seq58257 Length=7036 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 16742 GACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCA 16801 || ||||| || |||||||||||||||| | || ||||||| | || ||||| || Sbjct 4685 GATTCCTTCTGGATGTTGTAGTCGGCCAATGACCTGCCGTCCTCGAGCTGCTTGCCAGCG 4744 Query 16802 TAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCAC 16860 | || || ||||| | ||| ||||||||||| |||||| ||| || ||||||||| Sbjct 4745 CAGATGAGGCGCTGGAGCTCCTTGGGCACGCCCTCCTTGTCGTGCACCTT-CTGCTTCAC 4803 Query 16861 CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTT 16920 | || ||||||||| |||| || | ||||| || || | ||| | || Sbjct 4804 AGTCTCTACCGTGTCGCCGCTCTCCACCTCGAGCGTGATCGTCCGCCCCGACAGGGCCTT 4863 Query 16921 GACAAAAATCTGCATTT 16937 || || || ||||||| Sbjct 4864 CACGAAGATTTGCATTT 4880 >seq48430 Length=4921 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || |||| ||| |||| ||||| || |||||||| || ||||||||||||||| Sbjct 1279 CCTCCGCGGAGCCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 1338 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 | || ||||||| | || ||||| ||| | || || ||||| ||||| Sbjct 1339 AGTGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 1391 >seq47236 Length=4922 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || |||| ||| |||| ||||| || |||||||| || ||||||||||||||| Sbjct 3644 CCTCCGCGGAGCCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 3585 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 | || ||||||| | || ||||| ||| | || || ||||| ||||| Sbjct 3584 AGTGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 3532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404789360265100