Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq58066 547 1e-150 seq57096 426 3e-114 seq41485 426 3e-114 seq41484 426 3e-114 seq53831 288 2e-72 seq52012 100 5e-16 >seq58066 Length=10012 Score = 547 bits (606), Expect = 1e-150 Identities = 977/1418 (69%), Gaps = 71/1418 (5%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTT 243795 ||| ||||||||| || || | |||||| | ||| | |||||||||||||||||||| Sbjct 5500 ACGGTGAACTGGATCGCGTTGG-CGGCGGGCCGGGTGCGAAGGTAGTACATGCCGGTCTT 5558 Query 243796 GAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGG 243855 ||| || || |||||||| || |||||| | || ||||| | | ||| | Sbjct 5559 GAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCAAAC--GAG-----G 5611 Query 243856 GTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTC 243915 | ||||| || ||| |||||| |||||||||||||||| | ||| || || || Sbjct 5612 G-----CTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGATC 5666 Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 ||||||||| ||||| | | ||| | | ||| || | |||||||| | ||| Sbjct 5667 GGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTGTACAGCTTCTT 5726 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || ||||||| | | |||||| ||| |||||||| ||||| || ||||| | | Sbjct 5727 GATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAGACGAGCTTGTT 5786 Query 244036 -----GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAG---GTGC 244087 |||| | | ||| ||||| ||||| | | |||| ||| |||| Sbjct 5787 CTTGAGCGCGGGCGA-----CCAGAGGCC---GCGCTGCTGGAGCTCGCGCAGAAGGTGC 5838 Query 244088 CTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 ||| || || || || || | || | ||||| ||||| |||| | || Sbjct 5839 TCGTTGACGACGGTGAAGTCGCCGGCGAGGATACGGCGGGTGTAGATGTTGGTCGTGTAG 5898 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 ||||| | || ||| |||||||||| ||||||| || || || |||||||||| | Sbjct 5899 GGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCC 5958 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCC 244267 || || || ||| | || |||||| |||| | | |||| | ||||||| Sbjct 5959 ACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCC 6018 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 ||| || |||| | | || |||||| | ||| ||| ||| |||||| Sbjct 6019 CACCTGTCCGACGGCAC---------GACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTG 6069 Query 244328 CTGACG-GGGCT-GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGC 244385 |||| |||| ||||||||||||| |||||| || ||| ||| || |||| | Sbjct 6070 --GACGCGGGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTC---GT 6124 Query 244386 TCTCGTCGA---GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGG 244442 || | ||| |||||||||||||||||||||||||||| ||| | ||||||| Sbjct 6125 TCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTCGAAGATGGCGCGGTTGAGCTCGCGGG 6184 Query 244443 CCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGC 244502 ||| | ||| | ||| || ||| |||||||||||||||||||| |||||||| | Sbjct 6185 CCTCGTCGCTCTCCCACGGGTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTC 6244 Query 244503 CGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGT 244562 ||||||||||||| ||||| ||| |||| ||| ||| |||||||||||||| ||| Sbjct 6245 CGATGCCGATGGGCCTGTGGCGCATGTTCGAGTTGCGGGCCTCGGGCACGGGGTAGTAGT 6304 Query 244563 TGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCT 244622 || ||||||||||||||| ||||| ||||| || ||||||||| |||| || Sbjct 6305 TGATGTCGATCACCTTGTTAAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCT 6364 Query 244623 GAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGA 244682 | ||| ||||| || ||||||| |||| | || |||| Sbjct 6365 GGTGGTCAAACTCGC------------CGTTGGTGATG------AACTTGGGCAGCGCGA 6406 Query 244683 CGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGC 244742 |||||||||||| ||||||||||| || | ||||||||||| | ||| |||| Sbjct 6407 GCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGC 6466 Query 244743 AGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGT 244802 | ||||| ||| ||||||||| |||||||| || ||||||||| |||||||||||| Sbjct 6467 ACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGT 6526 Query 244803 CCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGA 244862 ||||||| |||||| ||||| |||||||||| ||| | |||||| | | ||| | Sbjct 6527 CCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACA 6586 Query 244863 GGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 | ||| ||||||||| | ||| || |||||| ||||||||| |||| Sbjct 6587 GCTCCTGGGCCTTGACCACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCT 6646 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGG--CACGACGCCGGGCACATGAG 244980 |||||||||| |||||| ||| ||||||||| | || | ||||| | ||| Sbjct 6647 CCTCGAACTCCTTGCCCCACGAGTCGAACAGGCCGGGGGCCTCGTTG--GGGCAAAAGAG 6704 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 ||| |||||||| || || | || |||||| |||||||| ||||| ||| | | Sbjct 6705 CGACCAGTCGCCGCCCGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTA 6764 Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100 |||||| || | || | | ||| ||| ||| ||||||| |||| || | ||||| Sbjct 6765 GAAGAGATCGCGGGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTC 6824 Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGA 245138 ||||| ||| ||||||||||||| | ||||| |||| Sbjct 6825 AAAGATGTCCGCGTGCCAGGGCTCGAGGTAGATGGCGA 6862 Score = 168 bits (186), Expect = 1e-36 Identities = 254/354 (72%), Gaps = 8/354 (2%) Strand=Plus/Plus Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 |||||||| |||||||||||||||||| ||||| |||||| |||||||| || Sbjct 7116 CCGCCGGCTGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATC 7175 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 |||| ||||||| ||||||| ||||| || |||||||| || ||| ||| | | Sbjct 7176 GAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCG 7235 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACCCGTACGTCTG 245466 ||||| || || ||| |||||||||| ||| ||| ||| ||| | || |||| |||| Sbjct 7236 TTGAAGAGCGTCGGGGTGGCGTGGGTGAAG-AGCTGCTGCGACAAGAGGTCGTAGGTCTC 7294 Query 245467 GAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCT 245525 || || ||| ||||||||| ||| | | ||| ||| | |||||| |||||| Sbjct 7295 GATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGC-CACGCGCATGAGCATGTGCT 7353 Query 245526 GGGGCGTCTCGATGGGTCCCTCGGGTC--CCTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 |||| ||||| | | | ||| || ||| | ||||||||||||||| ||||| Sbjct 7354 GGGGTCGCTCGA--CGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTT 7411 Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG 245637 ||| |||||||| | |||| |||||| | || | ||| || || ||||| Sbjct 7412 GAAGCCAAAGTAGGTGTAGTTGAAGTCGCGCTCGTACTTGATCGCGGCCTCGAG 7465 >seq57096 Length=4203 Score = 426 bits (472), Expect = 3e-114 Identities = 618/864 (72%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 4190 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 4131 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 4130 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 4071 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 4070 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 4011 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 4010 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 3951 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 3950 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 3891 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 3890 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAG 3831 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 3830 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 3772 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 3771 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 3712 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 3711 GCTCAAGAAGCGTGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 3653 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 3652 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 3596 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 3595 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 3537 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | ||| ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 3536 GTGACGGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 3477 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 3476 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 3423 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 3422 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 3363 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 3362 TTCGAACGCCGCGTCGGCGAGTAC 3339 >seq41485 Length=1387 Score = 426 bits (472), Expect = 3e-114 Identities = 618/864 (72%), Gaps = 24/864 (3%) Strand=Plus/Plus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 14 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 73 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 74 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 133 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 134 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 193 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 194 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 253 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 254 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 313 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 314 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAG 373 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 374 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 432 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 433 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 492 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 493 GCTCAAGAAGCGTGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 551 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 552 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 608 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 609 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 667 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | ||| ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 668 GTGACGGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 727 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 728 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 781 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 782 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 841 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 842 TTCGAACGCCGCGTCGGCGAGTAC 865 >seq41484 Length=9505 Score = 426 bits (472), Expect = 3e-114 Identities = 618/864 (72%), Gaps = 24/864 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||| |||||||| Sbjct 920 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAA 861 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || ||| | |||| | |||||| || || | |||| | | ||| Sbjct 860 GTCGATCTGAGCTCCGACATGAAGCACTGGGAATCGCTCAACAACGACGAGAGGCACTTC 801 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||||||||||| || |||||||| || ||||| || ||| Sbjct 800 ATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCC 741 Query 42471 ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATA 42530 | | |||||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 740 GGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATC 681 Query 42531 GCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT 42590 ||||| |||||| | ||||| ||| ||||| | || || |||| ||| || ||| Sbjct 680 GCCATCGAGAACATCCACTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGAC 621 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | |||||| || | || ||| ||||| ||||| |||||| ||||||||||| Sbjct 620 TCGGTCGAGAAGGACCGCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAG 561 Query 42651 GCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 || ||||||||| | || |||||| | ||| || || || |||| |||| | || Sbjct 560 GCCGACTGGGCGATGAAGTGGATCAACAAGGAG-GGCGTCGAGACCTTCGCCGAGCGTCT 502 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || | || ||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct 501 CGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCAGCTTCTGCTCCATCTTCTG 442 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| || || || |||||||| ||| ||||| ||||| | |||||| | | Sbjct 441 GCTCAAGAAGCGTGGCCTC-ATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCG 383 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 | ||||| || || | ||||| ||||||||||| | | | | | | ||| |||||| Sbjct 382 ATGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACACCATGCTCGTCA---ACAAGC 326 Query 42886 CCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 |||||| || || || || |||||| |||||||| ||||| |||||||| ||| Sbjct 325 CCTCGACCGA-CGTTCCCAAGCAGATCATCCTCGAGGCCGTCGAGATTGAGAAGGAATTC 267 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | ||| ||||||| |||||| |||| ||||||||||| ||||||||||||| ||||| Sbjct 266 GTGACGGAGTCGCTCCCCGTGGCCCTCATCGGCATGAACGCCGACCTCATGTGCCAGTAC 207 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC------CTCTAC 43058 ||| ||| ||||||||||| ||||| ||| | ||| || || | |||| Sbjct 206 ATCGAGTTCGTCGCCGACCGCCTCCT-CGCC-----GCCCTCGGCTGCGACAAGCACTAC 153 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | | ||| ||| | |||||| |||||| | ||||||||||||||||| Sbjct 152 AACCAGACCAACCCGTTCCCGTGGATGGAGCTCATCTCCCTCGAGGGCAAGACCAACTTC 93 Query 43119 TTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| ||||||| ||| ||| Sbjct 92 TTCGAACGCCGCGTCGGCGAGTAC 69 >seq53831 Length=10026 Score = 288 bits (318), Expect = 2e-72 Identities = 396/543 (73%), Gaps = 18/543 (3%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || || || ||||| |||||| |||||| | ||||||||||| || ||||| | Sbjct 5656 CTCTTTAACGCCATCGAGACGGTGCCCTCGGTGAAGAAGAAGGCCGAGTGGGCCATGCGG 5715 Query 42669 TGGATCGA----GAG--TCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 |||||| | ||| || |||| || || | |||| | || || | || || || Sbjct 5716 TGGATCAACAAGGAGGATCTCGAC---ACCTTTGCCGAGCGCCTCGTCGGATTCGCCACC 5772 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGT 42781 |||||||||||||||||||||||| ||||| |||||||||||||||||| | ||| Sbjct 5773 GTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGTTCCATCTTCTGGCTCAAGAAACGCGGT 5832 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || |||||||| ||| ||||||| ||||| ||||||||| | |||||||| ||||| Sbjct 5833 CTC-ATGCCCGGCCTCGCCTTCTCCAACGAGCTCATCAGCGGCGACGAGGGCCTGCACGC 5891 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 || |||||||||||||||| | || ||| | ||||||| |||| || || | Sbjct 5892 AGAGTTTGCCTGCCTCCTGTAC---AGTATGCTCGTGAACAAGCCGTCGAGCGA-CGTGC 5947 Query 42902 CCGGGCC-ATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960 | || ||| || |||||||| ||||||||||||||||| ||||| ||||||| | Sbjct 5948 CAAAGCAGATCGTCCTCGAGGCCGTCGAGATCGAGAAGGAGTTTGTCACGGAGTCGCTCC 6007 Query 42961 CCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020 | ||| | || ||||||||||| | ||||| |||| |||||||| ||| ||||||| Sbjct 6008 CGGTGGCGCTCATCGGCATGAACGCGGGCCTCACGTGCCAGTACATCGAGTTTGTCGCCG 6067 Query 43021 ACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079 ||| ||| || ||| | | | || | | | ||||||| | | ||||||| | Sbjct 6068 ACCGTCTGCTCGTGGC-GCTCGGGTGCGACAAACACTACAACGCCACCAACCCCTTCCCC 6126 Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139 | |||||| ||||| | ||||||||||||||||| |||||| || |||| ||| Sbjct 6127 TGGATGGAGCTGATCTCACTCGAGGGCAAGACCAACTTCTTCGAGCGCCGAGTCGGCGAG 6186 Query 43140 TAC 43142 ||| Sbjct 6187 TAC 6189 Score = 138 bits (152), Expect = 2e-27 Identities = 271/394 (69%), Gaps = 14/394 (4%) Strand=Plus/Plus Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTT--GGCGTTGCAGGCGTCCTTGTAGAG 244812 ||| ||||||||| ||||||||||| || |||| | |||||| |||||||| ||||| Sbjct 9516 ACTGGATGGTGCCGAGGTGCTGGTGGTT--ACTTTCGCTGTTGCATGCGTCCTTATAGAG 9573 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAG 244871 |||| ||||| || ||||| | || | |||||| ||| | ||| || ||| | Sbjct 9574 CATGTAGGGCGTGCCCGTCTCCACTTGTGACTCGAGGATCGC-GAACCACAGCTCCTGGG 9632 Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 |||||| || | ||| || ||| || ||||||||||| ||| || |||| |||| Sbjct 9633 CCTTGATGGTGCGGCGGGCGCGGCCTTCCCGCTCGTAGCGGGCGTAGAGTTCCTCAAACT 9692 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 | |||||||| || | || || || | || ||| || || ||| Sbjct 9693 TGTCTCCCCAGACGTCCTGAAGACC-CGGTGCTTCGTTGGG---ATCGAAC----AGCGC 9744 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 | || ||| ||| | || |||||| || ||||||| ||| ||||| | ||||||||| | Sbjct 9745 CACCAGCCTCGACGCGCTTCATGAATAGATCGGGGACCCACAGGGCGTAGAAGAGGTCGC 9804 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | | | ||| ||| ||| ||||||||| || || | || || |||| ||| Sbjct 9805 GAGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCCTGAGATCGAGGAACTCGAAGATGTCCG 9864 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCC 245145 ||||||||||||| ||||| | || ||| || Sbjct 9865 AATGCCAGGGCTCCAGGTAGATCGTGAAGGCTCC 9898 Score = 131 bits (144), Expect = 3e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 ||||||| ||||| || ||||||||||||||| | |||| |||||| |||| | | Sbjct 9100 TCGAGGGAGGCGTGGTGGATGGTCTCGAAGATGAGGCGATTCAGGTCGCGCGCCTGGTGG 9159 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | | | ||| | ||| | ||||||||| || ||||| |||||||| ||||||||| Sbjct 9160 CTGTCCCACGGGTGACGCATGAGCATGAAGACATCCGCCAGGCCCTGCACTCCGATGCCG 9219 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| ||||| ||| |||| ||| ||| ||||| | ||||| |||||||||| Sbjct 9220 ATGGGCCTGTGGCGCATGTTCGAGTATCGGGCCTCGGGGATCGGGTAGTGGTTGCCGTCG 9279 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGA 244595 || || ||||||| ||||||| Sbjct 9280 ATGACTCGGTTGAGGCCTCGGGTGA 9304 Score = 129 bits (142), Expect = 1e-24 Identities = 176/244 (72%), Gaps = 14/244 (6%) Strand=Plus/Plus Query 243763 GGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTG 243822 ||||||||| | ||||||||||||||||||||||| | || ||| || | || ||| Sbjct 8744 GGCCTTGGTGCGGAGGTAGTACATGCCGGTCTTGAGACTCTTGCGCCACGCTTAGAAGTG 8803 Query 243823 CATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAG 243882 ||||| ||| ||||| | || |||||| || | | ||||||||| Sbjct 8804 CATGGACGTGAGCTTGGGGAAGGTG------GGGTCGGCCATGTA------GAGGTTGAG 8851 Query 243883 GGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTG 243942 |||||||||||||||| | ||| || || || ||||||| | ||||| | | ||| Sbjct 8852 CGACTGGCTCTGGTCGATGTAGGCCGAGCGGTCGGCGGCCAGGTCGATGATGACGCGCTG 8911 Query 243943 AGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCG-GGGAACCCTTCGATGT 244001 || ||||| || | |||||||||| || ||||| || |||| |||| | | ||||||| Sbjct 8912 CGAGATCTCCCACACAGTCTTGTAGAGGGCCTTGACGT-CTCGAGGGATCTCGTCGATGT 8970 Query 244002 TCTG 244005 |||| Sbjct 8971 TCTG 8974 Score = 116 bits (128), Expect = 7e-21 Identities = 184/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 |||||| ||||||| |||||||||||||| || |||| |||||||||||||||| Sbjct 5273 CACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAG 5332 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | || || | | |||| |||| | || || | | ||||| | ||| Sbjct 5333 GTCGATCTCGGTGATGACATCAAGCACTGGCAATCTCTCACGGCCGACGAACCGCACTTC 5392 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 |||| || | ||||| ||||| ||||| ||||| || || ||||||||||| Sbjct 5393 ATCAAGCACGTTCTGGCATTCTTTGCCGCTAGCGACGGTATCGTGGCAGAGAACCTGGCG 5452 Query 42471 ACCAGGTTCATGAAAGAGGTG-CAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGAT 42529 | ||||||||||||||| |||| | || || | ||||||||||||||||| || Sbjct 5453 GGTCGCTTCATGAAAGAGGTGCCAGTGC-CCGAAGCAAGGTGCTTCTACGGCTTCCAAAT 5511 Query 42530 AGCCATAGAGAACGTGCACTC 42550 ||||| |||||| | ||||| Sbjct 5512 CGCCATCGAGAACATCCACTC 5532 >seq52012 Length=6832 Score = 100 bits (110), Expect = 5e-16 Identities = 269/407 (66%), Gaps = 16/407 (4%) Strand=Plus/Plus Query 243873 AGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA 243932 |||||||||| | |||||||||||| | | ||| | || || ||||||| | |||||| Sbjct 5005 AGAGGTTGAGCGGCTGGCTCTGGTCAATGTAGGCCAAGCGGTCAGCGGCCAAGTTGATGA 5064 Query 243933 GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACC 243992 | | ||| | ||||| || | |||||||||| || |||||||| | |||| | Sbjct 5065 TGACGCACTGCAAGATCTCCCACACAGTCTTGTAGAGGGCCTTGAGGTCTTGAGGGATCT 5124 Query 243993 CTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCC 244052 | || ||| ||||||| ||||| ||| || || ||| | | ||| || ||| || Sbjct 5125 CATCAATGCTCTGCACAGAGCCATTG-CAACAAT-AGCATGCT--TCATCTTCTCGGACC 5180 Query 244053 ACAGGCC------CAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACT 244106 | || || || | | || |||| || |||||| ||| |||||| || | Sbjct 5181 AGAGCCCTCTCTGCATGAGGTC--GCGC----ACAAGGTGCGGGTTGACCACCATGAAGT 5234 Query 244107 CTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGT 244166 | || |||| | || || ||||| |||| | || || |||| ||| || Sbjct 5235 CGCCTCCGAGCATGATGCACTTGTAGATGTTGGTCGTGTAGGGTTCGAACGCCTCACAGT 5294 Query 244167 TGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCA 244226 | || || ||||| | ||| || || ||||| ||| |||||||||| ||| | Sbjct 5295 TACCGAGGATCTGTGACGTCGAAGCGGTGGGCATCAGCGCCACCAGCAGAGAGTTGTAGA 5354 Query 244227 CGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 ||||||| || |||| | | ||| | ||||||||||| || Sbjct 5355 CGCCGTGGAGCTTGATGTTGGCACGAAGCCTGGTCCAGTCCCACGTG 5401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943625161522400