Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq58772 178 3e-39 seq53109 156 1e-32 seq54650 152 1e-31 seq56944 147 5e-30 seq52280 147 5e-30 seq43031 143 6e-29 seq56991 141 2e-28 seq40434 138 3e-27 seq60261 136 9e-27 seq60216 122 2e-22 seq17665 116 9e-21 seq15432 105 2e-17 seq21326 100 7e-16 seq5343 100 7e-16 seq10258 98.7 2e-15 seq15433 91.5 3e-13 seq48430 84.2 5e-11 seq47236 84.2 5e-11 >seq58772 Length=3437 Score = 178 bits (196), Expect = 3e-39 Identities = 180/233 (77%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | || ||||| || | |||| || || ||||| || |||| Sbjct 1853 CATG-CCGCCACGAAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGT 1795 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||||||||| ||||| || | || || || |||||||| || ||||| ||| | Sbjct 1794 CGGCGAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAG 1735 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| ||| |||||||| || |||| ||||||||| | Sbjct 1734 GGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTATCGCTCGACT 1675 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || ||||| ||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct 1674 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATT 1622 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | |||| || || ||||| || |||||||| Sbjct 2305 CCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2246 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| |||||||| ||| ||| Sbjct 2245 AGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGG 2186 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || || |||||||| ||| |||||||| || |||| ||| ||| || Sbjct 2185 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCGGAGCTC---TCG 2129 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| |||||||| ||||||||||| |||||||| Sbjct 2128 ACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2079 >seq53109 Length=5902 Score = 156 bits (172), Expect = 1e-32 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | || || || ||||| || |||||||| Sbjct 4463 CCGCCGCGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 4404 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || |||||||| || ||||| ||| ||| Sbjct 4403 AGGGTGCGACCATCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 4344 Query 288367 ATTCCTTCTTTATCCTGGATTTTC-GCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| ||| ||||| ||||| || || | |||||||| ||||| Sbjct 4343 ATGCCCTCCTTGTCCTGGATCTTCTGCTTT-ACGTTCTCGATGGTGTCGCTCGACTCTAC 4285 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| |||||||| ||||||||||| |||||||| Sbjct 4284 CTCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4237 >seq54650 Length=1408 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | || || || ||||| || ||||||||| Sbjct 1401 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1342 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| |||||||| || | ||| Sbjct 1341 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 1282 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | |||||||| || || Sbjct 1281 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACC 1222 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 1221 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 1175 >seq56944 Length=8418 Score = 147 bits (162), Expect = 5e-30 Identities = 173/233 (74%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| ||||| || | || || || ||||| || |||| Sbjct 7193 CATG-CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGT 7135 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || || || ||||| || | || || || |||||||| || ||||| ||| | Sbjct 7134 CGGCCAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGATCAG 7075 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| ||||| || ||||| || ||| |||||||| || || | ||| ||| | Sbjct 7074 GGGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGGACGACT 7015 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || ||||| ||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct 7014 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 6962 Score = 138 bits (152), Expect = 3e-27 Identities = 173/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || ||||| || | || || || ||||| || |||| Sbjct 7421 CATG-CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGT 7363 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || || || ||||| || | || || || |||||||| |||||||| || | Sbjct 7362 CGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGG---T 7306 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||| || || || || |||||||| ||| || ||||| || || | ||| || Sbjct 7305 CGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGACG 7246 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||| ||||||||||| |||||||| ||||||||||| |||||||| Sbjct 7245 ACTCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 7191 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || ||||| || |||||||| Sbjct 7645 CCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 7586 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || || ||||| || ||||| || || Sbjct 7585 AGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGA 7526 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || || |||||||| ||| || ||||| || || | ||| ||| || Sbjct 7525 ATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTC---TCG 7469 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| |||||||| ||||||||||| |||||||| Sbjct 7468 ACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 7419 >seq52280 Length=2070 Score = 147 bits (162), Expect = 5e-30 Identities = 163/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| |||| || || || ||||| || ||||||||||||||||| ||||| Sbjct 1880 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCC 1821 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || || || |||||||| |||||||| || || ||| || || || || Sbjct 1820 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTG---GTCGGGGGGAATACCCTCCTTG 1764 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| ||| |||||||| || || | |||||||| || || ||||| ||||| Sbjct 1763 TCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATG 1704 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| ||||| ||||| ||||||||| Sbjct 1703 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 1668 Score = 116 bits (128), Expect = 9e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 288300 GTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA 288359 |||||| || ||||| ||||| || | || || || |||||||| || ||||| || Sbjct 2070 GTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTC 2011 Query 288360 ATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419 ||||| ||||| || |||||||| ||| |||||||| || || | || ||| Sbjct 2010 GGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCAGACGA 1951 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||| |||||||| ||||||||||| |||||||| Sbjct 1950 CTCGACCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1897 >seq43031 Length=7181 Score = 143 bits (158), Expect = 6e-29 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| ||||||||||||||||| ||||| || | || || || |||||| Sbjct 25 TCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 84 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTT 288401 || || ||||| ||| ||||| || || || ||||| || ||| || |||||||| Sbjct 85 ATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTTTGC-TTCACGTT 143 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||||| || || || ||||| ||||| ||||| ||||| || ||||| || Sbjct 144 CTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 203 Query 288462 GAATATCTGCATT 288474 ||| ||||||||| Sbjct 204 GAAGATCTGCATT 216 >seq56991 Length=1928 Score = 141 bits (156), Expect = 2e-28 Identities = 172/233 (74%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 1091 CATG-CCACCACGGAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 1149 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| || || ||||| || | || || || |||||||| || ||||| || Sbjct 1150 CGGCGAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGG 1209 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| ||| |||||||| || || | ||||| || | Sbjct 1210 GAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACT 1269 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || ||||| ||||| ||||| ||||| || ||||| ||||| ||||||||| Sbjct 1270 CAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 1322 >seq40434 Length=1363 Score = 138 bits (152), Expect = 3e-27 Identities = 136/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 288298 TAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGA 288357 ||||||||||||||||| ||||| || | || || || |||||||| |||||||| || Sbjct 2 TAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 61 Query 288358 GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTC 288417 | ||||| || || || |||||||| ||| |||||||| || || | |||||| Sbjct 62 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTC 121 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 122 GACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 177 >seq60261 Length=7311 Score = 136 bits (150), Expect = 9e-27 Identities = 175/236 (74%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| ||||| |||| ||| || || ||||| || |||| Sbjct 1200 CATG-CCGCCGCGCAGACGAAGAACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 1258 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || ||||| ||||| || | || || || |||||||| |||||||| || Sbjct 1259 CGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGG 1318 Query 288362 CTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTC 288417 ||||| || || || |||||||| ||| |||| |||||| || || | || |||| Sbjct 1319 GAGGGATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATTGTGTCCGAGCTC 1377 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||| |||||||| ||||||||||| |||||||| Sbjct 1378 ---TCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 1430 Score = 120 bits (132), Expect = 7e-22 Identities = 131/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 288300 GTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA 288359 ||||||||||||||| ||||| || | || || || |||||||| || ||||| ||| Sbjct 1530 GTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATC 1589 Query 288360 ATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419 ||||| || || || ||||| || ||| |||||||| || || | ||| ||| Sbjct 1590 GGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCAATGGTGTCGGACGA 1649 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| || || || ||||| ||||| |||||||| Sbjct 1650 CTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1703 >seq60216 Length=3196 Score = 122 bits (134), Expect = 2e-22 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || |||||||| Sbjct 916 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 975 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || ||||| || ||| Sbjct 976 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 1035 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || || || || ||||| || ||| |||| |||||| || || | || |||| || Sbjct 1036 ATGCCCTCCTTGTCCTGAATCTTTTGCTT-CACGTTCTCGATCGTGTCCGAGCTC---TC 1091 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| |||||||| ||||||||||| |||||||| Sbjct 1092 GACCTCGAGGGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 1142 >seq17665 Length=187 Score = 116 bits (128), Expect = 9e-21 Identities = 140/189 (74%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||||||| || || ||||| || | || || || |||||||| Sbjct 2 TTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 61 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| ||| || |||||||| Sbjct 62 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTCG 121 Query 288406 ATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | || |||| || || ||||| || || ||||| |||||||| ||||||||| Sbjct 122 ATCGTGTCCGAGCTC---TCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACG 178 Query 288463 AATATCTGC 288471 || |||||| Sbjct 179 AAGATCTGC 187 >seq15432 Length=160 Score = 105 bits (116), Expect = 2e-17 Identities = 108/140 (77%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393 |||||||| |||||||| || || ||| || || || || |||||||| ||| Sbjct 159 GCGAAGATGAGACGCTGCTGG---TCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGC 103 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 ||||| || || |||| |||||| || || || ||||| ||||||||||| || || || Sbjct 102 TTCACATTCTCGATAGTATCGCTGGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGG 43 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||||||||| |||||||| Sbjct 42 GTCTTGACGAAGATCTGCAT 23 >seq21326 Length=141 Score = 100 bits (110), Expect = 7e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || |||||||| ||| |||||||| || |||| |||||| || || Sbjct 20 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTATCGCTGGACTCG 79 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || || || ||||||||||| |||||||| Sbjct 80 ACCTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 129 >seq5343 Length=175 Score = 100 bits (110), Expect = 7e-16 Identities = 129/177 (73%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||||||| || || ||||| || | || || || |||||||| Sbjct 2 TTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 61 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || || || || || || |||||||| ||| |||||||| || Sbjct 62 AGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCG 121 Query 288406 ATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || | || |||| || || ||||| ||||||||||| |||||||| |||||| Sbjct 122 ATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTG 175 >seq10258 Length=196 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || |||||||| ||| |||||||| || || | |||||| || || || ||| Sbjct 2 CCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACCTCG 61 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||| |||||||| ||||||||||| |||||||| Sbjct 62 AGAGTAATCGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCAT 105 >seq15433 Length=121 Score = 91.5 bits (100), Expect = 3e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || |||||||| ||| |||||||| || || | ||||| || || |||||||| ||| Sbjct 120 TTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACTTCGAGGGTG 61 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || || ||||||||||| |||||||| Sbjct 60 ATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 23 >seq48430 Length=4921 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || |||||||| ||| |||||||| || || | ||| ||||| || ||| Sbjct 1501 CCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGGATTCGACCTCG 1560 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 || || || ||||| |||||||||||||| ||||| || ||||| |||| Sbjct 1561 AGGGTAATGGTCTTGCCGGTCAGAGTCTTCACGAAGATTTGCATGATGT 1609 >seq47236 Length=4922 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || |||||||| ||| |||||||| || || | ||| ||||| || ||| Sbjct 3422 CCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGGATTCGACCTCG 3363 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 || || || ||||| |||||||||||||| ||||| || ||||| |||| Sbjct 3362 AGGGTAATGGTCTTGCCGGTCAGAGTCTTCACGAAGATTTGCATGATGT 3314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178740134662220