Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq58066 230 3e-55 seq53831 129 7e-25 seq40155 102 1e-16 seq39829 98.7 1e-15 seq57096 93.3 5e-14 seq41485 93.3 5e-14 seq41484 93.3 5e-14 seq52012 86.0 8e-12 >seq58066 Length=10012 Score = 230 bits (254), Expect = 3e-55 Identities = 878/1359 (65%), Gaps = 32/1359 (2%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || |||||||| |||| |||||| || | ||||| |||| Sbjct 5536 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTG 5595 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | ||||| | | || ||||| ||| ||| | ||| || |||||| || Sbjct 5596 AGCTTGGCAAACGAGGGCTCGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAG 5655 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || ||||| || || | | | | || |||||||| || || Sbjct 5656 GCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGCGGGAGCTCCCACACGGTCTTG 5715 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || ||||| || || || ||||| ||| |||| |||| ||||| | | Sbjct 5716 TACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGCTGGACCGAGCCGTTGTGCGAG 5775 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 || | | ||| | | |||||||| || || || ||| || || ||| Sbjct 5776 ACGAGCTTGTTCTTGAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGG 5835 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 |||| ||||| || || || || |||||| | || | ||||||||||||||| Sbjct 5836 TGCTCGTTGACGACGGTGAAGTCGCCGGCGAGGATACGGCGGGTGTAGATGTTGGTCGTG 5895 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 || |||||||||||||| ||||| |||| ||| || | || ||||| ||||||||||| Sbjct 5896 TAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGC 5955 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 |||| ||| || |||||| ||||| | ||| | ||| | | ||||| Sbjct 5956 GCCACGAGGAGCGAGTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAG 6015 Query 116038 TCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 || | || | | | | | |||| | || |||||| | || | |||||| Sbjct 6016 TCCCACCTGTCCGACGGCACGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCG 6075 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 116154 ||||| ||||| | |||| || | |||||| |||| ||| | ||| ||| || Sbjct 6076 GGCGAGCCCTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAG---GCG 6132 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA-TTCATTGCCTTGGCCTCGTC 116213 | ||||| |||| || || ||||| || ||| | || || | | ||||||||| Sbjct 6133 ACCAGGGCGGCGTAGTAGATGGTCTCGAAGATG-GCGCGGTTGAGCTCGCGGGCCTCGTC 6191 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || ||| | | || | || || || || || || || || || |||| ||| Sbjct 6192 GCTCTCCCACGGGTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCC 6251 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCT 116330 || || | || | ||| || || || || || ||| |||||| || | || | Sbjct 6252 GATGGGCCTGTGGCGCATGTTCGAGTTGCGGGC---CTCGGGCACGGGGTAGTAGTTGAT 6308 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 ||||| ||| | || || || |||||||| ||||| || || || ||||| | || Sbjct 6309 GTCGATCACCTTGTTAAGGTTCTTGGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTG 6368 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||||| || || | | || || |||| || || |||| || ||||| || || Sbjct 6369 GTCAAACTCGCC-GT-TGGTGAT-GA---ACTTGGGCAGCGCGAGCGAGGCCAGGTTGCA 6422 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||| | ||| || ||||||| | | ||||| |||| || || || Sbjct 6423 CACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTG 6482 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||||| | || || || || ||||| ||| || || |||||||| ||||| || Sbjct 6483 GATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTA 6542 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC--TGGC 116628 ||||| || ||||| | || |||| ||| || || ||| | || ||| || | Sbjct 6543 GGGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGAC 6602 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC-TTC 116687 | |||| || || ||||||| |||||| ||| |||| ||||| || Sbjct 6603 CACGCGGCGC--GCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTG 6660 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||||| | || | || || || |||| | || || ||||| ||||| | || || Sbjct 6661 CCCCAC-GAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCC 6719 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGAAGAGATCCCGAC 116806 | ||| || ||||||||||| ||||| || ||||| || |||| |||||||||| || Sbjct 6720 CGTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAG-GCCGTAGAAGAGATCGCG-- 6776 Query 116807 AGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 ||| | |||| || | || || || || || | ||||| | ||| ||||| Sbjct 6777 GGCGCGGTTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGC 6836 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 |||||| || || ||||| | |||| | |||||||| Sbjct 6837 GTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCCTTGCG 6875 Score = 118 bits (130), Expect = 1e-21 Identities = 215/315 (68%), Gaps = 0/315 (0%) Strand=Plus/Plus Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090 || || || || || |||| ||||| | ||||||| | |||| || ||||||| || Sbjct 7110 CCGATGCCGCCGGCTGACTTGGAGATGAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCC 7169 Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 117150 ||||||||||| |||| | | || |||||||| ||||| || || | || || Sbjct 7170 TCGATCGAGTCCTCCTTCATGGTGAGCAGGAAGCACGACGACAGCTGCGGACGCGGGGTG 7229 Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 117210 || ||||||||||| || || || |||||| |||| | || |||| |||||| Sbjct 7230 CCGGCGTTGAAGAGCGTCGGGGTGGCGTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAG 7289 Query 117211 GTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATG 117270 ||||| | || | ||| |||| ||| ||| | |||||| | || ||||| | |||| Sbjct 7290 GTCTCGATCACGGCGGGGATGTTGTCCTTGTGCAGACCGATGGCCACGCGCATGAGCATG 7349 Query 117271 TATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTC 117330 | |||||| || | | | || |||| ||| |||||| ||| | |||| Sbjct 7350 TGCTGGGGTCGCTCGACGATCTTGCCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTC 7409 Query 117331 TTGAGACCAAAATAG 117345 |||| ||||| ||| Sbjct 7410 TTGAAGCCAAAGTAG 7424 >seq53831 Length=10026 Score = 129 bits (142), Expect = 7e-25 Identities = 177/245 (72%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||||||| ||| || |||||||| | | |||||| || || |||||| || || Sbjct 5900 GCAAACTCTGCGTGCAGGCCCTCGTCGCCGCTGATGAGCTCGTTGGAGAAGGCGAGGCCG 5841 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| || ||||| | |||||| || | ||| || ||||| ||||||||||| Sbjct 5840 GGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAGAAGATG 5781 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAG-CGGGA--CTTTGTATCA 127696 ||||| || ||||| | | || ||||||||||||| | || || || | | Sbjct 5780 CCCTCGACGGTGGCGAATCCGACGAGGCGCTCGGCAAAGGTGTCGAGATCCTCCTTGTTG 5721 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | |||| ||| ||||||| ||||| |||| | | || || |||| ||| || | | Sbjct 5720 ATCCACCGCATGGCCCACTCGGCCTTCTTCTTCACCGAGGGCACCGTCTCGATGGCGTTA 5661 Query 127757 AAGAG 127761 ||||| Sbjct 5660 AAGAG 5656 Score = 96.9 bits (106), Expect = 4e-15 Identities = 264/398 (66%), Gaps = 20/398 (5%) Strand=Plus/Plus Query 116512 ATGGTGCCCAAGTTCTTTTGATTTGACTTTG--TGTTACACGCATCCTTGTAGAGCATAT 116569 |||||||| | || || || || ||||| |||| || || ||||| |||||||| | Sbjct 9521 ATGGTGCCGAGGTGCTGGTGGTT--ACTTTCGCTGTTGCATGCGTCCTTATAGAGCATGT 9578 Query 116570 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCA 116629 | ||||| ||||||||| ||| |||| ||| || || ||| | || ||| | Sbjct 9579 AGGGCGTGCCCGTCTCCACTTGTGACTCGAGGATCGCGAACCACAGCTCCTGGGCCTTGA 9638 Query 116630 CAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCAC 116689 ||| | ||| || || ||| |||||| | |||||| ||||||||| || | Sbjct 9639 TGGTGCGGCGGGCGCGGCCTTCCCGCTCGTAGCGGGCGTAGAGTTCCTCAAACTTGTCTC 9698 Query 116690 CCACAGCCT--CTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 || ||| | |||| || || ||||| | | ||| ||| || | ||||| Sbjct 9699 CC-CAGACGTCCTGA-AGACCCGGTGCTTCGTTGGGATCGAACAGCG--------CCACC 9748 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 116807 |||| || ||||||||||| || || |||| ||| || || ||||||| || || | Sbjct 9749 AGCCTCGACGCGCTTCATGAATAGATCGGGGACCCACAGGGCGTAGAAGAGGTCGCG--A 9806 Query 116808 GCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 116865 ||| | |||| || | || || || | | || | || || | ||| |||| Sbjct 9807 GCGCGGTTCTCCTCCTTGCCGTGGTTCTTCCTGAGATCGAGGAACTCGAAGATGTCCGAA 9866 Query 116866 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 ||||| || |||||||| | || || | |||||||| Sbjct 9867 TGCCAGGGCTCCAGGTAGATCGTGAAGGCTCCCTTGCG 9904 >seq40155 Length=7435 Score = 102 bits (112), Expect = 1e-16 Identities = 186/267 (70%), Gaps = 4/267 (1%) Strand=Plus/Plus Query 31509 CGGACATCTCAACTACGAGCTTCTATGCGAGCCACGTCATCACAGCGGGTGGCGTTGGTG 31568 |||||||||| || || |||||||| ||| |||| | ||||| ||| | ||| || | Sbjct 5093 CGGACATCTCGACGACCAGCTTCTACGCGTCCCACATTATCACGGCGTGCGGCTCGGGCG 5152 Query 31569 GTATGGTCATGTTCAATGACGATGAGCACCTTAAGCGAGCTCTCATGTTTAGGGATTGGG 31628 | |||||||||||||| || | |||| ||||| || |||| | || |||| Sbjct 5153 GCATGGTCATGTTCAACTCGGAGAGGTACCTCAAGCGCGCGACGATGTACCGCGACTGGG 5212 Query 31629 GGCGTATCGGTGACAATATTGAGGAGCCAAGTGAACGCTTCAACCACTCCGTAGATGGTA 31688 | || ||||| ||||| ||| || || ||||||| | | || || || | Sbjct 5213 GCCGGATCGGCGACAACGCCGAGAAGGTGGAGGAGCGCTTCACCGAGGTGGTCGACGGGA 5272 Query 31689 TCCCCTACGACTGGAAGTTCCTCTATGGTGTCGCCGGG-TATCACCTCAAG-GCATGTGA 31746 || | |||||| ||||||||||| || || || ||| || || ||||| ||| | || Sbjct 5273 TCTCGTACGACACCAAGTTCCTCTACGGCGT-GCTGGGCTACAACTTCAAGAGCA-GCGA 5330 Query 31747 GATGAATGCCGCCTTTGGTCTCGTCCA 31773 | | || ||||| ||||| || ||||| Sbjct 5331 GGTCAACGCCGCGTTTGGGCTGGTCCA 5357 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 31016 AAGAAAGTGTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATTAAAGCC 31075 ||||| |||| || || |||||| ||||| | || |||||| || || || ||| Sbjct 4555 AAGAAGGTGTACTACGCCCCCAACGGCTTTGAGGCCTACGGGGAGCTCGAGATCAAGGCC 4614 Query 31076 GTTGAGGATTGCCTTCGCGATGGCTGGCTCGCTGGCTTTGGTGATCGCA-CTATGGAGTT 31134 || ||||||||| | || ||||||||||| |||||||| | || | | || || Sbjct 4615 GTCGAGGATTGCTTGCGAAGCGGCTGGCTCGCCGGCTTTGGAAACTACACCCAACGA-TT 4673 Query 31135 TGAGAAGAGGGTGGCCGACACATTCGGAAAGAGACACGGACTCTTTGTAAACTCCGG 31191 ||||||||||| |||| | || || |||| |||| || ||||| ||||| || Sbjct 4674 CGAGAAGAGGGTCGCCGGCCTCTTTGGCAAGAAGTACGGCCTGTTTGTCAACTCGGG 4730 >seq39829 Length=6283 Score = 98.7 bits (108), Expect = 1e-15 Identities = 190/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 116544 GTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 ||| || || ||||| |||||||| || ||||| |||||||| ||| |||| ||| || Sbjct 4611 GTTGCAAGCGTCCTTATAGAGCATGTAGGGCGTGCCCGTCTCGACTTGTGACTCGAGGAT 4552 Query 116604 AGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || ||| | || ||| | |||| | | | || || ||| |||||| Sbjct 4551 CGCGAACCACAGCTCCTGGGCCTTGATAGTGCGGCGGCCACGGCCTTCCCTCTCGTAGCG 4492 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCT--CTGAGAGCCCTGGTGCCTTATCT 116721 |||||||| |||| |||| || ||| ||| || |||| || | ||||| | | Sbjct 4491 GGTGTAGAGTCCCTCGAACTTATCTCCC-CAGACTTCCTGA-AGACTCGGTGCTTCGTTG 4434 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 ||| ||| || ||||| | ||||| ||||||| ||||||||||| || || |||| | Sbjct 4433 GGATCGAACAGCGACCAGTAGCCACCAGCCTCAACGCGCTTCATGAATAGATCGGGGACC 4374 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT 116817 || || | ||||||| || || |||| | |||| Sbjct 4373 CATAGGGTGTAGAAGAGGTCGCG--AGCGCGGTTCT 4340 >seq57096 Length=4203 Score = 93.3 bits (102), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||| || ||| ||| | || || |||| || || |||||||| || Sbjct 3639 GTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCC 3698 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||| ||||||||||| ||||| || Sbjct 3699 ACGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGC 3758 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG---AGCGGGACTTTGTATCAAACCACTTCAT 127707 ||||| | | ||||||||||| |||| | | || | | | ||||||||| Sbjct 3759 GGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCAT 3818 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 |||||| | ||||| |||| || | || ||||||| ||| || Sbjct 3819 CGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGC 3863 >seq41485 Length=1387 Score = 93.3 bits (102), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||| || ||| ||| | || || |||| || || |||||||| || Sbjct 565 GTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCC 506 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||| ||||||||||| ||||| || Sbjct 505 ACGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGC 446 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG---AGCGGGACTTTGTATCAAACCACTTCAT 127707 ||||| | | ||||||||||| |||| | | || | | | ||||||||| Sbjct 445 GGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCAT 386 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 |||||| | ||||| |||| || | || ||||||| ||| || Sbjct 385 CGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGC 341 >seq41484 Length=9505 Score = 93.3 bits (102), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||| || ||| ||| | || || |||| || || |||||||| || Sbjct 369 GTGGAGGCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCC 428 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || ||| ||||||||||| ||||| || Sbjct 429 ACGCTTCTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGC 488 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG---AGCGGGACTTTGTATCAAACCACTTCAT 127707 ||||| | | ||||||||||| |||| | | || | | | ||||||||| Sbjct 489 GGCGAATCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCAT 548 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 |||||| | ||||| |||| || | || ||||||| ||| || Sbjct 549 CGCCCAGTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGC 593 >seq52012 Length=6832 Score = 86.0 bits (94), Expect = 8e-12 Identities = 178/263 (68%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 115719 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 115778 ||| ||||||||||| |||||||| ||| | || | ||||| || | || | || Sbjct 5078 GATCTCCCACACAGTCTTGTAGAGGGCCTTGAGGTCTTGAGGGATCTCATCAATGCTCTG 5137 Query 115779 GATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 115838 | ||||||| ||| || || || |||||| | || |||||||| || ||| Sbjct 5138 CACAGAGCCAT-TGCA---ACAATAGCATGCTTCATCTTCTCGGACCAGAGCCCTCTCTG 5193 Query 115839 CTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898 | |||| || ||| |||||| ||||| || | || || || |||| || | Sbjct 5194 CATGAGGTCGCGCACAAGGTGCGGGTTGACCACCATGAAGTCGCCTCCGAGCATGATGCA 5253 Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958 | ||||||||||||||||| || || || |||| |||||| | ||| || | || Sbjct 5254 CTTGTAGATGTTGGTCGTGTAGGGTTCGAACGCCTCACAGTTACCGAGGATCTGTGACGT 5313 Query 115959 GGAGGCTGTGGGCATGGGTGCCA 115981 || || |||||||| | |||| Sbjct 5314 CGAAGCGGTGGGCATCAGCGCCA 5336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613043311868400