Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq58066 361 1e-94 seq57096 268 2e-66 seq41485 268 2e-66 seq41484 268 2e-66 seq53831 183 6e-41 >seq58066 Length=10012 Score = 361 bits (400), Expect = 1e-94 Identities = 929/1394 (67%), Gaps = 77/1394 (6%) Strand=Plus/Plus Query 212585 GGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGC 212644 |||||| || ||||||||||||||||| |||||||||| |||| ||| | |||||| | Sbjct 5532 GGTGCGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGA 5591 Query 212645 TGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAG--GTTCAGG 212702 ||||| || || | | || |||| |||| ||||| ||| || Sbjct 5592 GGTGAGCTTG----GCAAACGAG---GG-----CTCG---CCCA--TGTAGACGTTGAGC 5634 Query 212703 GACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGG 212762 ||||| |||||||| ||| | | | | || ||||||||||| ||||| | | ||| Sbjct 5635 GACTGGCTCTGGTCGATGTAGGCCGAGCGATCGGCGGCCATGTCGATGATGACGCGCTGC 5694 Query 212763 GAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTC 212822 | ||||||||||||||||||| | | | |||| ||| || |||| | |||| | Sbjct 5695 GGGAGCTCCCACACGGTCTTGTACAGCTTCTTGATGTCGTCGGGGATCTCCTCGATGCGC 5754 Query 212823 TGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTC---CAGAGGCCC 212879 || || || || |||| | |||| | | || | || | |||||||| Sbjct 5755 TGGACCGAGCCGTTGTGCGAGACGAGCTT---GTTCTTGAGCGCGGGCGACCAGAGGCCG 5811 Query 212880 CTGGTCTCCAGGCACTTGACCAG---GTGAGGGTTGACTATCTGGAAGTCACCTGAGAGC 212936 | || | || || | ||| ||| |||||| | |||||| || | ||| Sbjct 5812 CG---CTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCGAGG 5868 Query 212937 ACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATC 212996 | | | ||| | ||| | ||||||||||| | || ||||||||| ||||| ||| Sbjct 5869 ATACGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATC 5928 Query 212997 TGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCG 213056 || | || ||| ||||||||||| ||||| ||||| ||| | || ||||||| | Sbjct 5929 TGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGCGAGTTGCGCAGACCGTGCTGG 5988 Query 213057 CCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCAC 213115 ||||| ||||| || || ||||||||||| ||| | ||| | | || || Sbjct 5989 GCGATGTTGGCGCGGA-GCGTGGCCCAGTCCCACCTGTCCGACGG---CACG------AC 6038 Query 213116 GTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTA 213175 | ||| | ||| ||| | |||| ||| | |||| ||||| ||| | ||| Sbjct 6039 GCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGGGCGAGCCCTCGTAGGTCTGGTA 6098 Query 213176 GGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTC 213235 || ||| | ||| || |||||| || || |||||| |||||||||||||| || Sbjct 6099 GGTGCCCTCGACCTGCGCGAGCTCGTTCGAGGCGACCAGGGCGGCGTAGTAGATGGTCTC 6158 Query 213236 AAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGG------ACGTGAAGGGCATCATCAT 213289 || || | | |||||||| |||||| | ||| | | |||| ||||| Sbjct 6159 GAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGGGTGGCGCATGATCAT 6218 Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 | || || || ||||| ||||| || |||||||||||||| ||||| | || ||| Sbjct 6219 G------AAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTGGCGCATGTT 6272 Query 213350 AGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 || ||| | ||| || |||||| ||||| |||||| | |||||| ||||| Sbjct 6273 CGAGTTGCGGGCCTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTTAAGGTTCTT 6332 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469 |||| |||| || ||| | | ||| | || ||| | ||| || |||| Sbjct 6333 GGTGACCACCTTCACGACGTCGTGCAGCTTCTGGTGGTCAAACTCG------CCGTTGGT 6386 Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTG 213528 | |||| ||||| |||| |||||||||||| ||||||||||| | | | | | | Sbjct 6387 GATGAACTTGGGCAGCGCGAGCGAGGCCAGGTTGCACACGGCCACCTCGTCGGGCGAC-G 6445 Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588 |||||| | || ||| ||||||||||| | |||||||||| |||| ||| |||| Sbjct 6446 TGTACTGGACGACCTCCGTGCACAGGTTCGACGACTGGATGGTGCCGAGGTGCTGCTGGT 6505 Query 213589 TTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648 | ||||| ||||| | |||||||| ||||||||||| | |||||||| | ||| | Sbjct 6506 TGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCGGTCTCGATCTGCG 6565 Query 213649 ACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTC-CGGGC 213707 || | || || | ||| || | | |||||||||||| || | || | ||| | Sbjct 6566 ACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACCACGCGGC-----GCGCGCGGCC 6620 Query 213708 GT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTC 213765 | |||||| | ||||| ||| | ||| || | |||||| || | | ||| | Sbjct 6621 CTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCCCACGAGTC-GAACAGGC 6679 Query 213766 C--CGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCA 213822 | || | | | ||| || | ||| |||||| ||| | |||| || | || || Sbjct 6680 CGGGGGCCTCGTT--GGGGCAAAAGAGCGACCAGTCGCCGCCCGTCTC-CACGCGCTTCA 6736 Query 213823 TGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTC 213882 |||||||||| || | |||||| || ||| || || | || | |||| ||| | Sbjct 6737 TGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGGTTCTCCTCCTTGC 6796 Query 213883 CAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 | ||| || ||| || || ||||||||||||||||||||||| ||||| | ||||| Sbjct 6797 CGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAGGGCTCGAGGTAGA 6856 Query 213943 TGGCAAAGGCGCCC 213956 |||| || || ||| Sbjct 6857 TGGCGAAAGCACCC 6870 Score = 138 bits (152), Expect = 2e-27 Identities = 284/417 (68%), Gaps = 4/417 (1%) Strand=Plus/Plus Query 213995 GTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATA 214054 |||| ||| ||| || | ||| | || |||||||| |||||||| || || || Sbjct 7016 GTTGTAGACGCGGAGCATGGGGATGAGACCGTTGGAGGTGCCGTTGGTGCCGCGGATGTA 7075 Query 214055 CGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGAT 214114 |||| |||||| | | | | | || ||| || ||||| ||||| |||||||||| Sbjct 7076 CGAGTTGGAGGCGCGGATGCGGTGCGCGGCGAGGCCGATGCCGCCGGCTGACTTGGAGAT 7135 Query 214115 CATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAG 214174 | |||||| || | | || || |||||| | || ||| || | | | | || Sbjct 7136 GAGGGCGCACTGCTTGAGGGTGTCGTAGATGCCCTCGATCGAGTCCTCCTTCATGGTGAG 7195 Query 214175 CAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGC 214234 || |||||| ||| ||||| || | | | ||| | |||||| ||||| ||| |||| Sbjct 7196 CAGGAAGCACGACGACAGCTGCGGACGCGGGGTGCCGGCGTTGAAGAGCGTCGGGGTGGC 7255 Query 214235 ATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTG 214294 ||| | | | || | || | ||| ||||||||| | || | |||||||| || Sbjct 7256 GTGGGTGAAGAGCTGCTGCGACAAGAGGTCGTAGGTCTCGATCACGGCGGGGATGTTGTC 7315 Query 214295 CTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT 214353 |||||| | | || ||| | ||| |||||||||||||| | ||| | | || | Sbjct 7316 CTTGTGCAGACCGATGGC-CACGCGCATGAGCATGTGCTGGGGTCGCTCGACGA-TCTTG 7373 Query 214354 TGGG-GCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409 | | || ||| |||||||||||||| || |||||||| |||||||||| |||| Sbjct 7374 CCGTCGACCCTGAAGAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTAGGTGTAG 7430 >seq57096 Length=4203 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 3358 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 3417 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 3418 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 3476 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 3477 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCCGTCAC 3536 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 3537 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 3593 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 3594 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 3650 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 3651 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCACGCTTCTTGAG 3710 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 3711 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 3770 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 3771 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 3827 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 3828 GGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 3884 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 3885 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 3944 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 3945 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 4004 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 4005 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 4063 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 4064 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 4123 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 4124 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 4182 >seq41485 Length=1387 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Minus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 846 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 787 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 786 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 728 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 727 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCCGTCAC 668 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 667 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 611 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 610 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 554 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 553 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCACGCTTCTTGAG 494 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 493 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 434 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 433 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 377 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 376 GGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 320 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 319 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 260 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 259 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 200 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 199 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 141 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 140 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 81 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 80 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 22 >seq41484 Length=9505 Score = 268 bits (296), Expect = 2e-66 Identities = 569/839 (68%), Gaps = 28/839 (3%) Strand=Plus/Plus Query 47861 TCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGT 47920 || |||||||| ||||| ||||| | |||||| |||||| | |||| ||||||| Sbjct 88 TCGAAGAAGTTGGTCTTGCCCTCGAGGGAGATGAGCTCCATCCACGGGAACGGGTTGGTC 147 Query 47921 GTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGAT 47979 ||| || | |||| ||| | | || ||| | || |||||| ||||||| Sbjct 148 TGGTTGTAGTGCT-TGTCGCAGCCGAGGGCGGCGAGGAGGCGGTCGGCGACGAACTCGAT 206 Query 47980 GTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAG 48039 ||| | |||||||| | ||||||||| ||||||| |||||| | | || || | Sbjct 207 GTACTGGCACATGAGGTCGGCGTTCATGCCGATGAGGGCCACGGGGAGCGACTCCGTCAC 266 Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT---AACGCGGGACTCTGA 48096 || |||||||| |||| ||||| || | |||||||| |||| || | || Sbjct 267 GAATTCCTTCTCAATCTCGACGGCCTCGAGGATGATCTGCTTGGGAACGTCGGTC---GA 323 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 ||| |||||| | | || ||| ||||| | |||||| ||||| | ||| | ||| || Sbjct 324 GGGCTTGTTG---ACGAGCATGGTGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTC 380 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || |||||||| | | |||| |||| ||| || ||||||| || | || ||||| Sbjct 381 ATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCACGCTTCTTGAG 440 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| ||| ||||||||||||||||| || || ||||| || Sbjct 441 CCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAATCCGAC 500 Query 48277 GAGCCTCTCTCCGAA-----AGAAG-CGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 ||| | ||| |||| || | | | ||||| |||||| | ||||||||| Sbjct 501 GAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTC 557 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTC 48387 ||||||||||||| | |||| ||||| ||||| ||||||| | | ||| ||| Sbjct 558 GGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTT---CTC 614 Query 48388 ACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 | | |||| || ||||| || || | ||||||||| ||||| | ||||| Sbjct 615 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 674 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||| || || ||||||||| | ||||| ||||||||| || | ||| Sbjct 675 GATGGCGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGAA 734 Query 48508 TCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACAT 48566 | || || |||||||| || || || || ||| || |||||||| | ||| | Sbjct 735 GC-GGCCGGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGACGT 793 Query 48567 GTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | || | ||| || | ||||| || | |||| | | |||| || | ||| || || Sbjct 794 GCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCTCA 853 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATG 48685 | || ||||| || | ||||||||||| || || || |||||||| |||| ||| Sbjct 854 GATCGACTTCCTCGGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGATG 912 >seq53831 Length=10026 Score = 183 bits (202), Expect = 6e-41 Identities = 365/537 (68%), Gaps = 24/537 (4%) Strand=Plus/Minus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || || |||| ||| |||||||| ||||| ||||| | ||||| |||||| Sbjct 6189 GTACTCGCCGACTCGGCGCTCGAAGAAGTTGGTCTTGCCCTCGAGTGAGATCAGCTCCAT 6130 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTG-----TTCCAGC 47956 || |||||||||||| | ||| || |||| | | || | | | ||| Sbjct 6129 CCAGGGGAAGGGGTTGGTGGCGTTGTA-----GTGTTTGTCGCACCCGAGCGCCACGAGC 6075 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | || ||||| |||||||||| | || ||||| ||||||||| ||||| Sbjct 6074 AGACGGTCGGCGACAAACTCGATGTACTGGCACGTGAGGCCCGCGTTCATGCCGATGAGC 6015 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | ||| || | | || |||| |||||||||||| |||| ||||| || || ||| Sbjct 6014 GCCACCGGGAGCGACTCCGTGACAAACTCCTTCTCGATCTCGACGGCCTCGAGGACGATC 5955 Query 48077 TGC-TTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 ||| || | || ||| || || ||||| || | || | || || | |||||| Sbjct 5954 TGCTTTGGCACGTCGCTC-GACGGCTTGTT---CACGAGCATACTGTACAGGAGGCAGGC 5899 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 ||| || ||||| ||| ||||| | |||||||||| ||||||||||| ||| || || Sbjct 5898 AAACTCTGCGTGCAGGCCCTCGTCGCCGCTGATGAGCTCGTTGGAGAAGGCGAGGCCGGG 5839 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||||| || | | ||||||||||| || | ||| ||||| |||||||||||||| Sbjct 5838 CATGAGACCGCGTTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAGAAGATGCC 5779 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG------AAGCGTTCTTGTCTGA 48309 ||| || | ||||| || ||| | ||| | || | | | | ||||| Sbjct 5778 CTCGACGGTGGCGAATCCGACGAGGCGCTCGGCAAAGGTGTCGAGATCCTCCTTGT---T 5722 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||| | ||||| || ||||||||||| | | |||| |||||| ||||| Sbjct 5721 GATCCACCGCATGGCCCACTCGGCCTTCTTCTTCACCGAGGGCACCGTCTCGATGGC 5665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930828444761600