Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07]
60,490 sequences; 83,589,038 total letters
Query= NC_020844.1
Length=40695
Score E
Sequences producing significant alignments: (Bits) Value
seq52577 84.2 6e-12
seq52576 84.2 6e-12
>seq52577
Length=4116
Score = 84.2 bits (92), Expect = 6e-12
Identities = 141/202 (70%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 2407 TGGTCGTAGTAATACTTGGGCGACTTGGACAGCAGGAAGATGTACTCGTGCGCCTTTGTG 2466
|||||||||| || || || || || | ||||||| ||||||||| | |||
Sbjct 1953 TGGTCGTAGTGGTAGGTGTCGGATTTAGAAAAGAGGAAGACGTACTCGTGGGAGCGCGTG 2012
Query 2467 CAGCGGTCGCGCACGCTCTCCGGCATTGG--GTTTGGCTTGTGCCAGATAATATCCTGAC 2524
||||| ||| || ||| ||| ||| |||||||||||||| || || |
Sbjct 2013 GGTCGGTCTTTGACGGATTCTGGC--TGGCAGTTGGGCTTGTGCCAGATGATGTCGGACC 2070
Query 2525 GCAGGTACCAGCCGTCGGCTTGCAGGGCGAACGCTACGCGCCAGGGGATGCCGATAAGGT 2584
|||||||||| ||||||||||| |||||||| || || | ||| || | || || ||||
Sbjct 2071 GCAGGTACCACCCGTCGGCTTGAAGGGCGAAGGCCACTCTCCACGGCAGACCTATGAGGT 2130
Query 2585 CTTTTGCTTTCAATCCGTTAGG 2606
| || | || || || || ||
Sbjct 2131 CCTTGGGCTTTAAGCCCTTCGG 2152
>seq52576
Length=4185
Score = 84.2 bits (92), Expect = 6e-12
Identities = 141/202 (70%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 2407 TGGTCGTAGTAATACTTGGGCGACTTGGACAGCAGGAAGATGTACTCGTGCGCCTTTGTG 2466
|||||||||| || || || || || | ||||||| ||||||||| | |||
Sbjct 1953 TGGTCGTAGTGGTAGGTGTCGGATTTAGAAAAGAGGAAGACGTACTCGTGGGAGCGCGTG 2012
Query 2467 CAGCGGTCGCGCACGCTCTCCGGCATTGG--GTTTGGCTTGTGCCAGATAATATCCTGAC 2524
||||| ||| || ||| ||| ||| |||||||||||||| || || |
Sbjct 2013 GGTCGGTCTTTGACGGATTCTGGC--TGGCAGTTGGGCTTGTGCCAGATGATGTCGGACC 2070
Query 2525 GCAGGTACCAGCCGTCGGCTTGCAGGGCGAACGCTACGCGCCAGGGGATGCCGATAAGGT 2584
|||||||||| ||||||||||| |||||||| || || | ||| || | || || ||||
Sbjct 2071 GCAGGTACCACCCGTCGGCTTGAAGGGCGAAGGCCACTCTCCACGGCAGACCTATGAGGT 2130
Query 2585 CTTTTGCTTTCAATCCGTTAGG 2606
| || | || || || || ||
Sbjct 2131 CCTTGGGCTTTAAGCCCTTCGG 2152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130008945006660
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |