Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq53109 125 6e-24 seq60261 123 2e-23 seq56944 114 1e-20 seq49253 114 1e-20 seq41697 114 1e-20 seq58772 111 1e-19 seq56991 111 1e-19 seq60216 107 2e-18 seq52280 100 3e-16 seq43031 100 3e-16 seq48430 82.4 7e-11 seq47236 82.4 7e-11 >seq53109 Length=5902 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| ||||| | | | Sbjct 4237 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACCCTCGAGGTAGAGTCGAGC 4296 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | ||||| || |||||||| ||||| || || || ||||||||||| Sbjct 4297 GACACCATCGAGAACGTAAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 4356 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| |||||| | | | || | || || ||| Sbjct 4357 CAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAGGATGGTCGCACCCTGGCCGACTACAAC 4416 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | || | || | ||||| || Sbjct 4417 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTCCGCGGCGG 4463 >seq60261 Length=7311 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| ||||| || || | | Sbjct 1430 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATTACCCTCGAGGTCGAGAGCTCG 1371 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||||||||| ||||| || || || |||||||| || Sbjct 1370 GACACAATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 1311 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||| ||||| | | || | || || ||| Sbjct 1310 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCCGACTACAAC 1251 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| | || | || ||||||| ||| Sbjct 1250 ATCCAGAAGGAGTCCACCCTTCACCTCGTTCTTCGTCTGCGCGGCGGC 1203 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || | | Sbjct 1202 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCATCT 1143 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| || || || ||||||||||| Sbjct 1142 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 1083 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| | | | || | || || ||| Sbjct 1082 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCCGACTACAAC 1023 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 1022 ATCCAGAAGGAGTCTACTCTCCAC 999 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || || |||||||||||||| ||||| || || ||||| || || || | ||||| Sbjct 1856 GTGAAGCAGAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGCCTTATCTTC 1797 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || ||||| ||||| | | | || | || || ||||| || ||||| ||| Sbjct 1796 GCCGGCAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCG 1737 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||| | || | || ||||||| ||| Sbjct 1736 ACTCTCCACCTCGTTCTTCGTCTGCGCGGCGGC 1704 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || | || Sbjct 1703 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCC 1644 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| || ||||| || || || || |||||||| Sbjct 1643 GACACCATTGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGATCAG 1584 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || | ||||| ||||| || ||||| ||||| Sbjct 1583 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGA 1549 >seq56944 Length=8418 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || |||||||| || || || ||||| || || | || Sbjct 7191 ATGCAGATCTTCGTCAAGACCCTGACCGGTAAGACGATCACCCTCGAGGTCGAGTCGTCC 7250 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| || || || || ||||| || Sbjct 7251 GACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 7310 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||| ||||| | | | || | || || ||| Sbjct 7311 CAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAAC 7370 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | ||| | || | || || ||| Sbjct 7371 ATCCAGAAGGAGTCGACTCTCCACCTCGTGCTCCGCCTCCGTGGTGGC 7418 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || ||||| || || || || ||||| || || | Sbjct 6960 ACAATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCG 7019 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || || ||||| || ||||| ||||| || || || ||| Sbjct 7020 TCCGACACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCCCCTGAT 7079 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | ||||| || || || ||||| ||||| | | || | || || Sbjct 7080 CAGCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACTCTGGCCGACTAC 7139 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || ||||| ||||| || ||| | || | || ||||||| ||| Sbjct 7140 AACATCCAGAAGGAGTCGACTCTCCACCTCGTTCTTCGTCTGCGCGGCGGC 7190 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || |||||||| || || || ||||| || || | || Sbjct 7419 ATGCAGATCTTCGTCAAGACCCTGACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCC 7478 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| || || || |||||||| || Sbjct 7479 GACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 7538 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | |||||||| || || ||||| ||||| | | || | || || ||| Sbjct 7539 CAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGTACTCTGGCCGACTACAAC 7598 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 7599 ATCCAGAAGGAGTCCACCCTCCAC 7622 >seq49253 Length=1508 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || ||||| || || || || ||||| || || | Sbjct 1137 ACCATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCG 1196 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || ||||||||||| ||||| || || || || || ||| Sbjct 1197 TCCGACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCTGAT 1256 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | ||||| ||||| || ||||| ||||| | | | || | || || Sbjct 1257 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTAC 1316 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| |||||||| || || || ||| | || | || ||||||| ||| Sbjct 1317 AACATCCAAAAGGAGTCCACGCTCCACCTCGTTCTTCGTCTGCGCGGCGGC 1367 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| ||||| || || ||| | Sbjct 1368 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAGTCCAGC 1427 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| || || || ||||||||||| Sbjct 1428 GACACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 1487 Query 24824 CAACGTTTGATCTTTGCCGG 24843 || || | ||||| ||||| Sbjct 1488 CAGCGCCTCATCTTCGCCGG 1507 >seq41697 Length=921 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || ||||| || || || || ||||| || || || Sbjct 231 ACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCC 172 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || || ||||| || ||||| || || || |||||||| Sbjct 171 AGCGACACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCCGAC 112 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | ||||||||||| || ||||| ||||| | | | || | || || Sbjct 111 CAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTAC 52 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || ||||| || || || ||| | || | || ||||||| ||| Sbjct 51 AACATCCAGAAGGAGTCCACTCTCCACCTCGTTCTTCGTCTGCGCGGCGGC 1 >seq58772 Length=3437 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| ||||| || || | || Sbjct 2079 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTCGAGAGCTCC 2138 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| || || || ||||||||||| Sbjct 2139 GACACTATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 2198 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||| ||||| | | || | || || ||| Sbjct 2199 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTGGCCGACTACAAC 2258 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 2259 ATCCAGAAGGAGTCCACGCTCCAC 2282 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || ||||| || || | || Sbjct 1851 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTCGAGTCGTCC 1910 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| || || || || || || || Sbjct 1911 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1970 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| | | || | || || ||| Sbjct 1971 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGGCCGACTACAAC 2030 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | || | || ||||||| ||| Sbjct 2031 ATCCAGAAGGAGTCGACTCTTCACCTCGTCCTCCGTCTGCGCGGTGGC 2078 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || ||||| ||||| || || || || ||||| || || | Sbjct 1620 ACAATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCG 1679 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||| || | || | || || || |||||||| ||||| || || || || || ||| Sbjct 1680 AGCGATACTATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGAT 1739 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || || | ||||| ||||| || ||||| ||||| Sbjct 1740 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGA 1777 >seq56991 Length=1928 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || ||||| || || || || ||||| || || || Sbjct 1324 ACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCC 1265 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || || |||||||| ||||| || || || |||||||| Sbjct 1264 AGCGACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGAC 1205 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | ||||| ||||| || ||||| ||||| | | | | | || || Sbjct 1204 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTCGCCGACTAC 1145 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || ||||| ||||| || ||| | ||| | || | || || ||| Sbjct 1144 AACATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTCCGTGGTGGC 1094 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || ||||| || || | | Sbjct 1093 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 1034 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| || || || || || ||||| Sbjct 1033 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAG 974 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| | | | || | || || ||| Sbjct 973 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTGGCTGACTACAAC 914 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | ||| | || | || || ||| Sbjct 913 ATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTCCGTGGTGGC 866 >seq60216 Length=3196 Score = 107 bits (118), Expect = 2e-18 Identities = 167/238 (70%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || ||||| || || | | Sbjct 1142 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACGATCACCCTCGAGGTCGAGAGCTCG 1083 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || ||||| || || || || || || || Sbjct 1082 GACACGATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 1023 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||||||||| || ||||| ||||| | | | || | || || ||| Sbjct 1022 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 963 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 || || ||||| || || || ||| | || | || ||||||| ||| |||| ||| Sbjct 962 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTGCGCGGCGGC--AACTAAGC 907 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| |||||||| || || || ||||| || || | | Sbjct 1824 ATGCAGATCTTCGTGAAGACGCTGACCGGTAAGACCATCACCCTCGAGGTCGAGAGCTCG 1765 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| ||||| || || || |||||||| || Sbjct 1764 GACACTATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 1705 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAG 24850 || || | ||||| ||||| || ||| Sbjct 1704 CAGCGCCTCATCTTCGCCGGCAAGCAG 1678 >seq52280 Length=2070 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| ||||| || || | | Sbjct 1897 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACTCTCGAGGTCGAGTCGTCT 1956 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||| ||||| ||||| || |||||||| || Sbjct 1957 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 2016 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || | ||||| ||||| || ||||| ||||| Sbjct 2017 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGA 2051 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || ||||| || || | Sbjct 1666 ACAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCG 1725 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || || |||||||| ||||| || || || || ||||| Sbjct 1726 AGCGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGAC 1785 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| | ||||| ||||| || ||||| ||||| | | | | || || Sbjct 1786 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTAC 1845 Query 24881 AACATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| ||||| || ||| Sbjct 1846 AACATCCAGAAGGAGTCGACTCTTCAC 1872 >seq43031 Length=7181 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || ||||| || || || || ||||| || || || Sbjct 218 ACAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCC 159 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || |||||||| || ||||| || || || ||||||||| Sbjct 158 AGCGACACGATCGAGAACGTGAAGCAAAAGATTCAGGACAAGGAGGGCATCCCTCCCGAT 99 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || || | ||||| || || || ||||| ||||| Sbjct 98 CAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGA 61 >seq48430 Length=4921 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCG 24862 ||| || |||||||| || || ||| |||||||||| || || ||||| ||||| ||| Sbjct 1404 AGGTATCCCTCCCGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCG 1345 Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922 | || || | || || ||||| || ||||| ||||| || ||| |||| |||| | Sbjct 1344 T-ACAC-TGGCCGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGGCTC 1287 Query 24923 CGCGGAGGCGG 24933 ||||||||||| Sbjct 1286 CGCGGAGGCGG 1276 >seq47236 Length=4922 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCG 24862 ||| || |||||||| || || ||| |||||||||| || || ||||| ||||| ||| Sbjct 3519 AGGTATCCCTCCCGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCG 3578 Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922 | || || | || || ||||| || ||||| ||||| || ||| |||| |||| | Sbjct 3579 T-ACAC-TGGCCGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGGCTC 3636 Query 24923 CGCGGAGGCGG 24933 ||||||||||| Sbjct 3637 CGCGGAGGCGG 3647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449557421177200