Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq51907 91.5 1e-13 seq50290 91.5 1e-13 seq50289 91.5 1e-13 seq46138 91.5 1e-13 >seq51907 Length=4977 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 107177 CACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGAA 107236 |||||||||||||| ||||| || ||||||| || ||||||||| | ||| || | Sbjct 2447 CACGGCTTCCACGTCCACGAGTTCGGCGACAACACCAACGGCTGCGTGAGCGCGGGCGGC 2506 Query 107237 CACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAGAAAGGCACGTCGGC 107296 |||||||| ||| | | || ||||||| ||||||| | || | ||||| ||| Sbjct 2507 CACTTCAACCCCTTCGGCAAGAAGCACGGTGGACCCGACGATGAGGAGCGTCACGTTGGC 2566 Query 107297 GATCTGGGCAACGTC 107311 ||||| ||||||||| Sbjct 2567 GATCTCGGCAACGTC 2581 >seq50290 Length=5021 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 107177 CACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGAA 107236 |||||||||||||| ||||| || ||||||| || ||||||||| | ||| || | Sbjct 2531 CACGGCTTCCACGTCCACGAGTTCGGCGACAACACCAACGGCTGCGTGAGCGCGGGCGGC 2472 Query 107237 CACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAGAAAGGCACGTCGGC 107296 |||||||| ||| | | || ||||||| ||||||| | || | ||||| ||| Sbjct 2471 CACTTCAACCCCTTCGGCAAGAAGCACGGTGGACCCGACGATGAGGAGCGTCACGTTGGC 2412 Query 107297 GATCTGGGCAACGTC 107311 ||||| ||||||||| Sbjct 2411 GATCTCGGCAACGTC 2397 >seq50289 Length=3841 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 107177 CACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGAA 107236 |||||||||||||| ||||| || ||||||| || ||||||||| | ||| || | Sbjct 911 CACGGCTTCCACGTCCACGAGTTCGGCGACAACACCAACGGCTGCGTGAGCGCGGGCGGC 970 Query 107237 CACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAGAAAGGCACGTCGGC 107296 |||||||| ||| | | || ||||||| ||||||| | || | ||||| ||| Sbjct 971 CACTTCAACCCCTTCGGCAAGAAGCACGGTGGACCCGACGATGAGGAGCGTCACGTTGGC 1030 Query 107297 GATCTGGGCAACGTC 107311 ||||| ||||||||| Sbjct 1031 GATCTCGGCAACGTC 1045 >seq46138 Length=3865 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 107177 CACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGAA 107236 |||||||||||||| ||||| || ||||||| || ||||||||| | ||| || | Sbjct 2955 CACGGCTTCCACGTCCACGAGTTCGGCGACAACACCAACGGCTGCGTGAGCGCGGGCGGC 2896 Query 107237 CACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAGAAAGGCACGTCGGC 107296 |||||||| ||| | | || ||||||| ||||||| | || | ||||| ||| Sbjct 2895 CACTTCAACCCCTTCGGCAAGAAGCACGGTGGACCCGACGATGAGGAGCGTCACGTTGGC 2836 Query 107297 GATCTGGGCAACGTC 107311 ||||| ||||||||| Sbjct 2835 GATCTCGGCAACGTC 2821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412537244141570