Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq57351 91.5 2e-13 >seq57351 Length=6971 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 21749 CCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGGGATGAT 21807 ||| | || |||||||||||| |||| || ||||||| | || || || || || || Sbjct 485 CCCCAGATTGGCGACAAGTTCAGTTCGCGCCATGGCCAA-AAGGGTACGGTGGGCATCAT 427 Query 21808 CTATTCGCAAGAAAACATGCCATTCA-CATCTTCCGGCATGACCCCCGACATCATCATCA 21866 || ||| || ||||||| |||| |||| ||||| ||||||||||||||| ||| Sbjct 426 GTACCGGCAGGAGGACATGCCCTTCAACATCGAA-GGCATCACCCCCGACATCATCGTCA 368 Query 21867 ACCCCAACTGCATTCCCTCCAGAATGACCAT 21897 |||| || ||||||||| |||||||||| Sbjct 367 ACCCGCACGCCATTCCCTCGCGAATGACCAT 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521151246333200