Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq58066 215 6e-51 seq57096 132 5e-26 seq41485 132 5e-26 seq41484 132 5e-26 seq48207 116 4e-21 seq59009 111 2e-19 seq40579 111 2e-19 seq53831 100 3e-16 seq52012 98.7 1e-15 seq50281 86.0 7e-12 seq48306 86.0 7e-12 seq48305 86.0 7e-12 >seq58066 Length=10012 Score = 215 bits (238), Expect = 6e-51 Identities = 554/830 (67%), Gaps = 38/830 (5%) Strand=Plus/Minus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCC---GACTGAAGCGGCGCGCAAGTC 55194 |||||| ||| ||| ||||||| || |||||||| | | || ||| ||||| || Sbjct 6330 GAACCTTAACAAGGTGATCGACATCAACTACTACCCCGTGCCCGA---GGCCCGCAACTC 6274 Query 55195 CAACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGAT 55254 ||| | || ||| ||||||||| |||||| || |||||| |||||||| |||||||||| Sbjct 6273 GAACATGCGCCACAGGCCCATCGGCATCGGAGTGCAGGGCCTGGCCGACGTCTTCATGAT 6214 Query 55255 GCTCGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTC 55313 | | || | || || || || || | |||| | ||||||| || | Sbjct 6213 CATGCGCCACCCGTGGGAGAGCGACGAGGCCCGCGAGCTCAACCGCGCCATCTTCGAGAC 6154 Query 55314 GCATCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACG 55373 |||||||| || || || | | ||| | || || | |||||| |||||| Sbjct 6153 -CATCTACTACGCCGCCCTGGTCGCCTCGAACGAGCTCGCGCAGGTCGAGGGCACCTACC 6095 Query 55374 AGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGT 55433 |||| | | | ||||| || |||||| |||||| ||| || |||||| || Sbjct 6094 AGACCTACGAGGGCTCGCCCGCGTCCAAGGGCAAGCTCCAGCCCGACCTCTGGGGC--GT 6037 Query 55434 CTGACCCCATGTTTGACAAGTTGAAG-----CATG----------ACATTCACTTGTGGG 55478 | || || |||| || | | || | |||| | | | Sbjct 6036 CGTGCC----GTCGGACAGGTGGGACTGGGCCACGCTCCGCGCCAACATCGCCCAGCACG 5981 Query 55479 GCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGG 55538 | || |||||||| || ||||||||||| ||||| || || ||||| | |||||| ||| Sbjct 5980 GTCTGCGCAACTCGCTCCTCGTGGCGCCCATGCCCACGGCCTCGACCTCGCAGATCCTGG 5921 Query 55539 GCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAG 55598 ||||||||||| || ||||| |||||||||||||||||| ||||| | ||| || | Sbjct 5920 GCAACAACGAGTGCTTTGAGCCCTACACGACCAACATCTACACCCGCCGTATCCTCGCCG 5861 Query 55599 GTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG- 55657 | || || | | ||||| ||||||| | || || ||| || | | ||| Sbjct 5860 GCGACTTCACCGTCGTCAACGAGCACCTTCTGCGCGAGCTCCAGCAGCGCGGCCTCTGGT 5801 Query 55658 AACCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCA--GAATC-TGGAG 55714 ||||| | |||||| | | || | || || || ||||| | ||| |||| Sbjct 5800 CGCCCGC-GCTCAAGAACAAGCTCGTCTCGCACAACGGCTCGGTCCAGCGCATCGAGGAG 5742 Query 55715 ATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC- 55772 | ||| | || | ||||| || | ||| ||| ||||||||| | || ||| | ||| Sbjct 5741 A-TCCCCGACGACATCAAGAAGCTGTACAAGACCGTGTGGGAGCTCCCGCAG-CGCGTCA 5684 Query 55773 TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT 55832 | || |||||| || ||||| || |||||||||||| |||||| || ||| ||| Sbjct 5683 TCATCGACATGGCCGCCGATCGCTCGGCCTACATCGACCAGAGCCAGTCGCTCAACGTCT 5624 Query 55833 TCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGG 55892 ||||| | || || | |||||| | | |||||||||||| |||| ||| |||| Sbjct 5623 ACATGGGCGAGCCCTCGTTTGCCAAGCTCACCTCGATGCACTTCTACGCCTGGCGCAAGG 5564 Query 55893 GACTCAAGACGGGTATGTACTATCTGCGGACCCGCGCCAAGGCCAAGGCG 55942 | |||||||| || |||||||| || || ||||| || ||||| ||| Sbjct 5563 GCCTCAAGACCGGCATGTACTACCTTCGCACCCGGCCCGCCGCCAACGCG 5514 Score = 156 bits (172), Expect = 5e-33 Identities = 290/416 (70%), Gaps = 10/416 (2%) Strand=Plus/Minus Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || ||||| ||||||||||| | |||||||||||||||||||| |||||||| ||||| Sbjct 6887 GGAGGTGGTAAGCGCAAGGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCGGACATC 6828 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTG 53665 | || || ||||| ||| ||| || || | || |||| ||| ||| || || Sbjct 6827 TTTGACTTCCTCGACCTGAAGAAGAACCACGGCAAGGAGGAGAACCGCGCCCGCGATCTC 6768 Query 53666 TT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724 || ||| || ||||||||||| ||||| |||||| | ||||||| || || || || Sbjct 6767 TTCTACGGC-CTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGACGGGCGGCGACTG 6709 Query 53725 GTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAA 53784 || || | ||||| |||||| ||||||||| | | || ||||||| | Sbjct 6708 GTCGCTCTTTTGCCCCAACGAGGCCCCCGGCCTGTTCGACTCGTGGGGCAAGGAGTTCGA 6649 Query 53785 CGAGATGTATCGGACG-TAC--GCAGTTCAGGGCCGCTACAAGAAG-AAGGTCAAGGCGC 53840 |||| ||| || || ||| |||| |||||||| | | | ||||||||| | Sbjct 6648 GGAGAAGTA-CGAGCGCTACGAGCAG--GAGGGCCGC-GCGCGCCGCGTGGTCAAGGCCC 6593 Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900 ||| | ||| || |||||| || ||| | ||||| || ||||| |||||| | Sbjct 6592 AGGAGCTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACCGGCACGCCCTACATGCTGT 6533 Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 ||||||| | ||||| ||| ||||||| || || ||||| |||| | ||| Sbjct 6532 ACAAGGACGCCTGCAACGGCAAGTCCAACCAGCAGCACCTCGGCACCATCCAGTCG 6477 Score = 152 bits (168), Expect = 6e-32 Identities = 254/360 (71%), Gaps = 8/360 (2%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGC-GTGTCCGTGAGACGTA 53250 |||||||||| ||| | ||| | ||| ||| || | | ||| ||| || |||| || Sbjct 7344 TCATGCGCGTGGCCATCGGTCTGCACAAGGACAACATCCCCGCCGTGATCG--AGACCTA 7287 Query 53251 CGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 |||| | || || || ||| || |||||||| || || || |||||||| || || Sbjct 7286 CGACCTCTTGTCGCAGCAGCTCTTCACCCACGCCACCCCGACGCTCTTCAACGCCGGCAC 7227 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 | || ||| ||||| ||||||||| | | |||||||| ||||||||||| || Sbjct 7226 CCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACCATGAAGGAGGACTCGATCGAGGG 7167 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 ||||||||| || |||||| |||| |||| ||||||||||| | || || ||||| | Sbjct 7166 CATCTACGACACCCTCAAGCAGTGCGCCCTCATCTCCAAGTCAGCCGGCGGCATCGGCCT 7107 Query 53431 CCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 | | || | | || |||| || | | | ||| || || |||||| | || Sbjct 7106 -CGCCGCGC-ACCGCATCCGCGCCTCCAACTCGTACATCCGCGGCACCAACGGCACCTCC 7049 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || || | || ||||||||||||| |||| |||| ||||| |||||| |||| ||| Sbjct 7048 AACGGTCTCATCCCCATGCTCCGCGTCTACAACGACACTGCCCGCTACGTCGACCAAGGT 6989 >seq57096 Length=4203 Score = 132 bits (146), Expect = 5e-26 Identities = 337/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | ||| |||| || || || | ||||| ||||| || |||||||| Sbjct 3645 GCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCACGCTT 3704 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| || |||||||||||| ||||| || || Sbjct 3705 CTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAA 3764 Query 74888 GGCGACAAGGCGTTGCGCGAA-----CGGTGCA-TCGGAAGTCATCCAAGTCTGAGCCCA 74941 |||| || || | ||||| || || || | ||||| || ||||| Sbjct 3765 TCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCATCGCCCA 3824 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || || || ||||||| || || || ||||| || ||||||||| ||||||| Sbjct 3825 GTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTTCTC 3884 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||||| |||| || | || |||||| |||| || || || ||| Sbjct 3885 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 3944 Query 75062 GTTGAACGACTGGTACGC-GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | || ||| | | | || |||||| | |||||||| | | ||| || ||||| ||| Sbjct 3945 GATGG-CGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGA 4003 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | | ||| |||||| ||||||||||| || ||||| || |||| || Sbjct 4004 AGCGGCC--GGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGAC 4061 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||| ||||| | ||| |||| |||| ||||| | ||||| ||| Sbjct 4062 GTGCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCT 4121 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAA 75265 || ||| | |||||| |||||||||| Sbjct 4122 CAGATCGACTTCCTCGGCCGTCCAGAA 4148 >seq41485 Length=1387 Score = 132 bits (146), Expect = 5e-26 Identities = 337/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Minus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | ||| |||| || || || | ||||| ||||| || |||||||| Sbjct 559 GCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCACGCTT 500 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| || |||||||||||| ||||| || || Sbjct 499 CTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAA 440 Query 74888 GGCGACAAGGCGTTGCGCGAA-----CGGTGCA-TCGGAAGTCATCCAAGTCTGAGCCCA 74941 |||| || || | ||||| || || || | ||||| || ||||| Sbjct 439 TCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCATCGCCCA 380 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || || || ||||||| || || || ||||| || ||||||||| ||||||| Sbjct 379 GTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTTCTC 320 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||||| |||| || | || |||||| |||| || || || ||| Sbjct 319 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 260 Query 75062 GTTGAACGACTGGTACGC-GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | || ||| | | | || |||||| | |||||||| | | ||| || ||||| ||| Sbjct 259 GATGG-CGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGA 201 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | | ||| |||||| ||||||||||| || ||||| || |||| || Sbjct 200 AGCGGCC--GGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGAC 143 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||| ||||| | ||| |||| |||| ||||| | ||||| ||| Sbjct 142 GTGCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCT 83 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAA 75265 || ||| | |||||| |||||||||| Sbjct 82 CAGATCGACTTCCTCGGCCGTCCAGAA 56 >seq41484 Length=9505 Score = 132 bits (146), Expect = 5e-26 Identities = 337/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | ||| |||| || || || | ||||| ||||| || |||||||| Sbjct 375 GCCCTCATCGCGGCTGATCATCTCGTTACTGAAGGCGAGGCCGGGCATGAGGCCACGCTT 434 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | ||| ||||||| |||||| || |||||||||||| ||||| || || Sbjct 435 CTTGAGCCAGAAGATGGAGCAGAAGCTGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAA 494 Query 74888 GGCGACAAGGCGTTGCGCGAA-----CGGTGCA-TCGGAAGTCATCCAAGTCTGAGCCCA 74941 |||| || || | ||||| || || || | ||||| || ||||| Sbjct 495 TCCGACGAGACGCTCGGCGAAGGTCTCGACGCCCTCCTTGTTGATCCACTTCATCGCCCA 554 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || || || ||||||| || || || ||||| || ||||||||| ||||||| Sbjct 555 GTCGGCCTTCTTCTTGACCGAGGGCACGGTCTCGATGGCGCGGAAGAGGCGGTCCTTCTC 614 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||||| |||| || | || |||||| |||| || || || ||| Sbjct 615 GACCGAGTCCTTGACGTAGGTGTCGATAAGGAGCGAGTACATCTCGGAGTGGATGTTCTC 674 Query 75062 GTTGAACGACTGGTACGC-GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | || ||| | | | || |||||| | |||||||| | | ||| || ||||| ||| Sbjct 675 GATGG-CGATTTGAAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACCTCCTTCATGA 733 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | | ||| |||||| ||||||||||| || ||||| || |||| || Sbjct 734 AGCGGCC--GGCGAGATTCTCGGCCACGATGCCGTCGCTAGCCGCGAAGAAGGCCAAGAC 791 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||| ||||| | ||| |||| |||| ||||| | ||||| ||| Sbjct 792 GTGCTTGATGAAGTGCCTCTCGTCGTTGTTGAGCGATTCCCAGTGCTTCATGTCGGAGCT 851 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAA 75265 || ||| | |||||| |||||||||| Sbjct 852 CAGATCGACTTCCTCGGCCGTCCAGAA 878 >seq48207 Length=10384 Score = 116 bits (128), Expect = 4e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 53276 ACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGC 53335 || || ||||| || ||||| ||||||||||| ||| ||| |||||| || ||| Sbjct 10170 ACCCATGCCACCCCGACCCTCTTCAACGCTGGCACGCCCGTCCCGCAGATGAGTAGTTGC 10229 Query 53336 TTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGT 53395 || || ||| |||||||| ||||| ||||||||||||||||| || |||||| ||| Sbjct 10230 TTTCTCTTGGACATGAAGGAGGACTCCATCGACGGCATCTACGAAACCCTCAAGCGGTGC 10289 Query 53396 GCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427 || | |||||||||| | |||| || ||||| Sbjct 10290 GCACTCATCTCCAAGAGCGCGGGAGGCATCGG 10321 >seq59009 Length=4213 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 117350 CGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTT 117409 ||||| ||||| || ||| ||| | | |||| | |||||||| |||| |||||| Sbjct 3959 CGCGTGCCGAACTGCCCAGCCGGATAGAGGAGGGGGACGTTGTTGGAGCCCGGGAAGTTT 4018 Query 117410 TGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGC 117469 || |||| || ||| || || ||||| ||| || || ||||| || ||||| ||| Sbjct 4019 TGCGCCATGTGGACGATGGTCGAATGGAGCGACGCTTCGCCGTGGTGGTAGGCCGTTTGC 4078 Query 117470 TCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGT-CAGGTTCTTCTTGAG 117528 || | ||||||||| || ||||| ||||||||||| || | || ||| ||| ||||| Sbjct 4079 TCGGACACGTAGCCGGCAAGCTGCGCCACCTTCATTTC-GCTGTGCAGTTTCCGCTTGAA 4137 Query 117529 GCAGGCATAAATCACCTT 117546 ||| ||||| | ||||| Sbjct 4138 GCACGCATACAAGACCTT 4155 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 152073 CCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATT 152132 |||||| || ||||| |||| || | ||||||| || |||||||| |||| ||| || Sbjct 3958 CCGCGTGCCGAACTGCCCAGCCGGATAGAGGAGGGGGACGTTGTTGGAGCCCGGGAAGTT 4017 Query 152133 CTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTG 152192 || |||| | || || || || || |||||| |||||||| || ||||| || Sbjct 4018 TTGCGCCATGTGGACGATGGTCGAATGGAGCGACGCTTCGCCGTGGTGGTAGGCCGTTTG 4077 Query 152193 CTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAG 152252 ||| | | ||| || || | ||||||||||||||| || | ||| ||| ||||| Sbjct 4078 CTCGGACACGTAGCCGGCAAGCTGCGCCACCTTCATTTCGCTGTGCAGTTTCCGCTTGAA 4137 Query 152253 ACAGGCGTAAATCACCTT 152270 || || || | ||||| Sbjct 4138 GCACGCATACAAGACCTT 4155 >seq40579 Length=2370 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 117350 CGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTT 117409 ||||| ||||| || ||| ||| | | |||| | |||||||| |||| |||||| Sbjct 2116 CGCGTGCCGAACTGCCCAGCCGGATAGAGGAGGGGGACGTTGTTGGAGCCCGGGAAGTTT 2175 Query 117410 TGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGC 117469 || |||| || ||| || || ||||| ||| || || ||||| || ||||| ||| Sbjct 2176 TGCGCCATGTGGACGATGGTCGAATGGAGCGACGCTTCGCCGTGGTGGTAGGCCGTTTGC 2235 Query 117470 TCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGT-CAGGTTCTTCTTGAG 117528 || | ||||||||| || ||||| ||||||||||| || | || ||| ||| ||||| Sbjct 2236 TCGGACACGTAGCCGGCAAGCTGCGCCACCTTCATTTC-GCTGTGCAGTTTCCGCTTGAA 2294 Query 117529 GCAGGCATAAATCACCTT 117546 ||| ||||| | ||||| Sbjct 2295 GCACGCATACAAGACCTT 2312 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 152073 CCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATT 152132 |||||| || ||||| |||| || | ||||||| || |||||||| |||| ||| || Sbjct 2115 CCGCGTGCCGAACTGCCCAGCCGGATAGAGGAGGGGGACGTTGTTGGAGCCCGGGAAGTT 2174 Query 152133 CTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTG 152192 || |||| | || || || || || |||||| |||||||| || ||||| || Sbjct 2175 TTGCGCCATGTGGACGATGGTCGAATGGAGCGACGCTTCGCCGTGGTGGTAGGCCGTTTG 2234 Query 152193 CTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAG 152252 ||| | | ||| || || | ||||||||||||||| || | ||| ||| ||||| Sbjct 2235 CTCGGACACGTAGCCGGCAAGCTGCGCCACCTTCATTTCGCTGTGCAGTTTCCGCTTGAA 2294 Query 152253 ACAGGCGTAAATCACCTT 152270 || || || | ||||| Sbjct 2295 GCACGCATACAAGACCTT 2312 >seq53831 Length=10026 Score = 100 bits (110), Expect = 3e-16 Identities = 174/248 (70%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 55712 GAGATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG 55770 ||||| |||| | | | |||||| | ||| ||| ||||||||||| | ||| | | Sbjct 8962 GAGATCCCTC-GAGACGTCAAGGCCCTCTACAAGACTGTGTGGGAGATCTCGCAGC-GCG 8905 Query 55771 TC-TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACA 55829 || | || ||| || || || || || |||||||||||| |||||| || ||| Sbjct 8904 TCATCATCGACCTGGCCGCCGACCGCTCGGCCTACATCGACCAGAGCCAGTCGCTCAACC 8845 Query 55830 TCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889 ||| ||||| | || | | ||||| | | || |||||||| || | |||| | Sbjct 8844 TCTACATGGCCGACCCCACCTTCCCCAAGCTCACGTCCATGCACTTCTAAGCGTGGCGCA 8785 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGACCCGCGCCAAGGCCAAGGCGCAACAGG 55949 || | |||||||| || |||||||| || || ||| ||||||||| |||| | |||| Sbjct 8784 AGAGTCTCAAGACCGGCATGTACTACCTCCGCACCAAGGCCAAGGCCCAGGCCGATCAGG 8725 Query 55950 TGACTGTG 55957 | |||||| Sbjct 8724 TCACTGTG 8717 Score = 87.8 bits (96), Expect = 2e-12 Identities = 375/583 (64%), Gaps = 36/583 (6%) Strand=Plus/Minus Query 74455 ACTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGT 74514 |||| | || || ||||| || || || ||||||||||| || || | ||||| Sbjct 6196 ACTTGGCGTACTCGCCGACTCGGCGCTCGAAGAAGTTGGTCTTGCCCTCGAGTGAGATCA 6137 Query 74515 TCTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC---CCCAAACTGTG 74571 |||||||||| ||| ||||| | || ||| | || || ||| | | | Sbjct 6136 GCTCCATCCAGGGGAAGGGGTTGGTGGCGTTGTAGT---GTTTGTCGCACCCGAGC---G 6083 Query 74572 CCATGAGGCGA---TCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGC 74628 ||| ||| || || || ||||| | |||||||| | | ||||| | ||||| Sbjct 6082 CCACGAGCAGACGGTCGGCGACAAACTCGATGTACTGGCACGTGAGGCCCGCGTTCATGC 6023 Query 74629 CGATGAGTTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATT 74688 ||||||| ||| || | ||| |||| |||||| |||| | |||| ||| Sbjct 6022 CGATGAGCGCCACCGGGAGCGACTCCGTGACAAACTCCTTCTCGATCTCGACGGCCTCGA 5963 Query 74689 GGACAATCTTGT---GAATGTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC- 74744 |||| |||| | | | ||| | || || ||| | | || | ||| || Sbjct 5962 GGACGATCTGCTTTGGCACGTCGCTCGACGG---CTTGTTCACGAGCATACTGTACAGGA 5906 Query 74745 GTCACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAA 74804 | || ||||||||| ||| ||| || || | ||| || | || || || || | Sbjct 5905 GGCA-GGCAAACTCTGCGTGCAGGCCCTCGTCGCCGCTGATGAGCTCGTTGGAGAAGGCG 5847 Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 ||||| ||||| || || || ||||| | ||| ||||||| ||||||||| || |||| Sbjct 5846 AGGCCGGGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGAACAGAAGGAGCCCGAGAAG 5787 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924 |||||||| ||||| || || |||| ||||| | || || |||| || || || Sbjct 5786 AAGATGCCCTCGACGGTGGCGAATCCGACGAGGCGCT-CGGCAAAGGTG--TC-GAGATC 5731 Query 74925 ATCCAAGTCTGA-----------GCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTAT 74973 ||| || ||| ||||| || || || || |||| || || || | Sbjct 5730 CTCCTTGT-TGATCCACCGCATGGCCCACTCGGCCTTCTTCTTCACCGAGGGCACCGTCT 5672 Query 74974 CGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGAC 75016 |||| || | |||||| ||||| || |||| |||||||| Sbjct 5671 CGATGGCGTTAAAGAGGTGGGCCTTTTCGACGGGGTCCTTGAC 5629 >seq52012 Length=6832 Score = 98.7 bits (108), Expect = 1e-15 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 55486 CAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAA 55545 |||||| ||||| ||||||| ||||| ||||| |||||| | |||||| | || ||| Sbjct 5350 CAACTCTCTGCTGGTGGCGCTGATGCCCACCGCTTCGACGTCACAGATCCTCGGTAACTG 5291 Query 55546 CGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579 ||||||||||| || |||||||||||||||||| Sbjct 5290 TGAGGCGTTCGAACCCTACACGACCAACATCTAC 5257 >seq50281 Length=3564 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 159373 CGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTCGCCGTGTACTCGGGC 159432 || || ||||| || | ||||||||||||||||||||||||| ||| || ||||||| | Sbjct 2047 CGGATGGCTTCGAGGAGACGAAGGGTACCCATGGCGTCGACGTCCGCGGTATACTCGGCC 1988 Query 159433 TGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATAGACCTC 159482 || || || | ||||||||| ||| || | ||||| |||||||| Sbjct 1987 ACTTCGAAGGATACCTTCACGTGGCTCTGCGCCGCCAGGTTGTAGACCTC 1938 >seq48306 Length=3585 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 159373 CGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTCGCCGTGTACTCGGGC 159432 || || ||||| || | ||||||||||||||||||||||||| ||| || ||||||| | Sbjct 1518 CGGATGGCTTCGAGGAGACGAAGGGTACCCATGGCGTCGACGTCCGCGGTATACTCGGCC 1577 Query 159433 TGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATAGACCTC 159482 || || || | ||||||||| ||| || | ||||| |||||||| Sbjct 1578 ACTTCGAAGGATACCTTCACGTGGCTCTGCGCCGCCAGGTTGTAGACCTC 1627 >seq48305 Length=2226 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 159373 CGAATTGCTTCAAGAATTCGAAGGGTACCCATGGCGTCGACGTTCGCCGTGTACTCGGGC 159432 || || ||||| || | ||||||||||||||||||||||||| ||| || ||||||| | Sbjct 503 CGGATGGCTTCGAGGAGACGAAGGGTACCCATGGCGTCGACGTCCGCGGTATACTCGGCC 444 Query 159433 TGCTCAAAAGAGAGCTTCACGTGTGACTGGGCTCCGAGGTTATAGACCTC 159482 || || || | ||||||||| ||| || | ||||| |||||||| Sbjct 443 ACTTCGAAGGATACCTTCACGTGGCTCTGCGCCGCCAGGTTGTAGACCTC 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546802236302000