Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq58772 123 2e-23 seq54650 118 9e-22 seq52280 113 4e-20 seq40434 111 1e-19 seq56991 105 6e-18 seq56944 104 2e-17 seq41697 100 2e-16 seq40269 100 2e-16 seq53109 98.7 9e-16 seq26146 91.5 1e-13 seq60216 89.7 4e-13 seq17665 86.0 5e-12 seq60261 84.2 2e-11 >seq58772 Length=3437 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 1825 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCAAGCTGC 1766 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| || | ||| | || ||| |||||| ||| ||| Sbjct 1765 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 1706 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | |||||||||||||| || || | ||||| | || || ||| Sbjct 1705 TGCTTCACGTTCTCGATAGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 1646 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || ||||| ||||| Sbjct 1645 AGCGTCTTGACGAAGATCTGCAT 1623 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 2042 CTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1983 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 1982 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1923 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||| |||||| || || | |||||| | || ||||| || || || || Sbjct 1922 CTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 1863 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1862 GAAGATCTGCAT 1851 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 2281 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGACCGTCCTCAAGCTGC 2222 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| |||| || | || ||| |||||| ||| ||| Sbjct 2221 TTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 2162 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| ||| || || | || || | || || ||| Sbjct 2161 TGCTTCACGTTCTCGATAGTGTCGGAGCTCTCGACCTCGAGGGTAATGGTCTTGCCGGTC 2102 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 2101 AGGGTCTTGACGAAGATCTGCAT 2079 >seq54650 Length=1408 Score = 118 bits (130), Expect = 9e-22 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1366 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1307 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 1306 GATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1247 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 1246 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1187 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 1186 GAAGATTTGCATGTT 1172 >seq52280 Length=2070 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1860 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 1801 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 1800 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1741 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 1740 CTCGATGGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1681 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1680 GAAGATCTGCAT 1669 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 39112 TCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCG 39171 ||||| || || || |||| || ||||| ||||| || || ||||| |||||||||||| Sbjct 2069 TCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCG 2010 Query 39172 GTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGAC 39231 | || | || || |||||| ||| ||||| || | || | | ||| || |||| Sbjct 2009 GGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCAGACGAC 1950 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || | || || | || || ||||| || || || ||||| ||||| Sbjct 1949 TCGACCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1897 >seq40434 Length=1363 Score = 111 bits (122), Expect = 1e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 39109 TAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGG 39168 || ||||| || || || |||| || ||||| ||||| || || || |||||||||||| Sbjct 2 TAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 61 Query 39169 TCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTC 39228 || | ||| | || ||| |||||| ||| ||||| || | || | | || |||||| Sbjct 62 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTC 121 Query 39229 GACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||||| || || | ||||| | || || ||||| || || || ||||||||||| || Sbjct 122 GACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATGTT 180 >seq56991 Length=1928 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || ||||| ||| || || || || || ||||| || || || | Sbjct 1106 GCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGACC 1165 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||||| || | || ||| || Sbjct 1166 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTT 1225 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||||| || | || | | ||| ||||| ||||| || || | ||||| Sbjct 1226 GTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCAACCTCGAGGGTGAT 1285 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || || ||||| ||||| Sbjct 1286 GGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 1321 >seq56944 Length=8418 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || || || Sbjct 7382 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAA 7323 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | | ||| |||||| ||| ||||| |||| | Sbjct 7322 GATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 7263 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| |||||| || || | ||||| | || || ||||| || || || Sbjct 7262 CTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGAC 7203 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 7202 GAAGATCTGCAT 7191 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 7621 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGC 7562 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| || | | ||| |||||| ||| ||| Sbjct 7561 TTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 7502 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | || ||| ||| || || | ||||| | || || ||| Sbjct 7501 TGCTTGACGTTCTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTACCGGTC 7442 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 7441 AGGGTCTTGACGAAGATCTGCAT 7419 >seq41697 Length=921 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 26 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 85 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| || | || ||| |||||| || ||| Sbjct 86 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 145 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||| ||||| || || | ||||| | || || || Sbjct 146 TGCTTCACGTTCTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTG 205 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 206 AGGGTCTTCACGAAGATCTGCAT 228 >seq40269 Length=983 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || || || || || || |||| || ||||| Sbjct 189 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGACCGTCCTCGAGCTGC 130 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 129 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 70 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||| ||||| || || | ||||| | || || ||| Sbjct 69 TGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 10 Query 39262 AGCGTTTT 39269 ||||| || Sbjct 9 AGCGTCTT 2 >seq53109 Length=5902 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || ||||| || || || | Sbjct 4677 GCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCC 4618 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| |||||||| || || || ||||||||||| | || | || ||| || Sbjct 4617 GTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTT 4558 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||||| || | || | | ||| ||||| ||||| || || | |||| Sbjct 4557 GTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGA- 4499 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCA 39283 || | |||| || || || || ||||| |||| Sbjct 4498 --TTGTCTCCGTGAGGGTCTTCACGAAGATCTGCA 4466 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || | || || ||||| || || || || Sbjct 4428 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCATCCTCGAGCTGCTTACCGGCGAA 4369 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| |||| || | || ||| |||||| ||| ||||| || | | Sbjct 4368 GATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTTACGTT 4309 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 4308 CTCGATGGTGTCGCTCGACTCTACCTCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTGAC 4249 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 4248 GAAGATCTGCAT 4237 >seq26146 Length=139 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 11 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGC 70 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || ||||| ||||||||||||| || | || ||| |||||| ||| ||| Sbjct 71 TTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 130 Query 39202 TGTTT 39206 || || Sbjct 131 TGCTT 135 >seq60216 Length=3196 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 940 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 999 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||| | ||| | || ||| |||||| || || Sbjct 1000 TTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTT 1059 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | ||| || ||| ||| || || | ||||| | || || Sbjct 1060 TGCTTCACGTTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATCGTCTTGCCG 1116 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || ||||| ||||| Sbjct 1117 GTCAGCGTCTTGACGAAGATCTGCAT 1142 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| || || Sbjct 1861 CTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1920 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | ||| | || ||| |||||| ||| ||||| || | | Sbjct 1921 GATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1980 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| || |||||| || || | ||||| | || || || || || || || Sbjct 1981 CTCGATCGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 2040 Query 39273 AAAGATTTGCAT 39284 ||||||||||| Sbjct 2041 GAAGATTTGCAT 2052 >seq17665 Length=187 Score = 86.0 bits (94), Expect = 5e-12 Identities = 133/189 (70%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||||| || || || |||| || ||||| ||||| || || || Sbjct 2 TTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 61 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC 39216 |||||||||||||| | ||| | || ||| |||||| ||| ||||| |||| | | Sbjct 62 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTCG 121 Query 39217 ACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | ||| || ||| ||| || || | || || | || || |||||||| || || Sbjct 122 ATCGTGTCCGAGCT---CTCGACCTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACG 178 Query 39274 AAGATTTGC 39282 ||||| ||| Sbjct 179 AAGATCTGC 187 >seq60261 Length=7311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1228 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGC 1287 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | || ||| |||||| ||| || Sbjct 1288 TTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTT 1347 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | || || ||| ||| || || | || || | || || Sbjct 1348 TGCTTCACGTTCTCGATTGTGTCCGAGCT---CTCGACCTCGAGGGTAATGGTCTTGCCG 1404 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || ||||| ||||| Sbjct 1405 GTCAGCGTCTTGACGAAGATCTGCAT 1430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429228929587370