Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq59302 123 2e-23 seq61669 113 4e-20 seq61614 113 4e-20 seq61437 111 2e-19 seq56988 109 5e-19 seq49488 109 5e-19 seq60463 105 7e-18 seq40960 105 7e-18 seq62514 104 2e-17 seq62774 100 3e-16 seq60456 100 3e-16 seq10324 96.9 3e-15 seq61753 89.7 5e-13 seq59610 87.8 2e-12 >seq59302 Length=3966 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||| | || ||||| || || ||||| || ||| | Sbjct 2200 CCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2141 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| ||||| |||||||||||||| Sbjct 2140 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCGGGAGGG 2081 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | || | |||||| | | ||| ||| Sbjct 2080 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGCTCGACTCGACC 2021 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||||||||||| || || ||||| || |||||| Sbjct 2020 TCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATA 1973 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||| | || ||||| || || ||||| || || Sbjct 1516 CCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 1457 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| || || |||||||| ||||| Sbjct 1456 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGATCAGGAGGG 1397 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | || | |||||| | | ||| ||| Sbjct 1396 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACC 1337 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 1336 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1290 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| || || | ||| |||||||| |||||| Sbjct 1942 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCA 1883 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || || ||||| || || || ||||| || ||||| ||| || || || Sbjct 1882 GCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 1823 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | | ||| || || | ||| | ||||||||||||| ||| Sbjct 1822 ACGTTCTCGATCGTGTCCGAGCTCTCGACTTCGAGGGTAATGGTCTTGCCGGTCAGCGTC 1763 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 1762 TTGACGAAGATCTGCAT 1746 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| || || || |||| ||||| ||||| || || || ||||| || || Sbjct 2357 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTT 2298 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || || | | ||| | ||||| | | ||| ||||| | ||| | Sbjct 2297 GTCCTGGATCTTCTGCTTCACATTTTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGAT 2238 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||||||| | ||| || ||||| || |||||| Sbjct 2237 GGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 2201 >seq61669 Length=1808 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||| | |||||||| || || ||||| || ||| | Sbjct 669 CCGCCGCGCAGACGAAGAACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCC 728 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| || ||||| || ||||| |||| || || |||||||| || || Sbjct 729 AGCGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGGGGGG 788 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | || | |||||| | | ||| ||| Sbjct 789 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCGACC 848 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||||||||| || || ||||| || ||||| Sbjct 849 TCGAGGGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 895 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 191 GCCGCCGCGCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 250 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| || ||||| || ||||| |||| || || ||||| |||||||| Sbjct 251 CAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGG 310 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || ||| || || || | | || | ||||| | | ||| || Sbjct 311 AATACCCTCCTTATCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCTGAGCTCTCGAC 370 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 371 TTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 418 >seq61614 Length=59386 Score = 113 bits (124), Expect = 4e-20 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | || | || ||||| || || ||||| || ||| | Sbjct 2505 CCGCCGCGCAGACGAAGAACGAGRTGGAGMGTSGACTCCTTCTGGATGTTGTAGTCGGCC 2564 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| || || |||||||||||||| Sbjct 2565 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 2624 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || || | | || | |||||| | | ||| ||| Sbjct 2625 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACC 2684 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||||||| || | || || ||||| || |||||| Sbjct 2685 TCGAGAGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATA 2732 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||| | || ||||| || || ||||| || ||| Sbjct 2733 CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2792 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| || || |||||||||||||| Sbjct 2793 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCRGCGAAGATGAGGCGCTGCTGATCGGGAGGG 2852 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| || || || || | | || | ||||| | | ||| ||| Sbjct 2853 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGTGTCCGAGCTCTCGACC 2912 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||| || | || || ||||| || ||||| Sbjct 2913 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 2959 >seq61437 Length=178460 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||| | || ||||| || || ||||| || || Sbjct 48507 CCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 48448 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || ||||| |||| || || ||||| |||||||| Sbjct 48447 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 48388 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | || | |||||| | | ||| ||| Sbjct 48387 ATGCCCTCCTTGTCTTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACC 48328 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | ||||||||||||| || || ||||| || ||||| ||| Sbjct 48327 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTGCT 48277 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| | Sbjct 48963 CCGCCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 48904 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| |||||||| || || || |||| || || |||||||| ||||| Sbjct 48903 AAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGAGGG 48844 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || || | | || | |||||| | | ||| || Sbjct 48843 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACT 48784 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||||||||| | || || ||||| || |||||| Sbjct 48783 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 48736 >seq56988 Length=1639 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | || | || | ||| | || ||||| || || ||||| || ||| Sbjct 223 GCCGCCGCGCAGTCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 282 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| |||||||| |||| || || ||||| ||||| || Sbjct 283 CAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGCGG 342 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | || | ||||||| | ||| || Sbjct 343 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGGACGACTCGAC 402 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 403 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 450 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | || | ||| | ||| | || ||||| || || ||||| || ||| Sbjct 679 GCCGCCGCGCAGGCGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 738 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | ||| |||||||| || || || |||| || || |||||||||||||| Sbjct 739 CAGGGTACGGCCGTCCTCGAGCTGCTTGCCRGCGAAGATGAGGCGCTGCTGATCGGGAGG 798 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || || | | || | |||||| | | ||| || Sbjct 799 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCAAC 858 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGC 139767 ||| | ||| | |||||||| || | || || || || || ||||| || Sbjct 859 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCATTGC 909 >seq49488 Length=478 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||| | ||| ||||| || || ||||| || ||| | Sbjct 309 CCGCCGCGCAGACGAAGAACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 250 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || ||||| |||| ||||| ||||||||||| || Sbjct 249 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGGGGA 190 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| ||||| || | | || | ||||| | | ||| || Sbjct 189 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCCGAGCTCTCGACT 130 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||| || | || || ||||| || |||||| Sbjct 129 TCGAGGGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATA 82 >seq60463 Length=11997 Score = 105 bits (116), Expect = 7e-18 Identities = 184/266 (69%), Gaps = 9/266 (3%) Strand=Plus/Plus Query 152716 GAGCGACGGTAAATTGCTGGGAATTGGCCGCCGGAAGCGTACGAAAATAGTACATGCCCG 152775 || ||||||| || || | ||||| || || | || |||| ||||||||||| | Sbjct 9508 GATCGACGGTGAACTGGATCGCGTTGGCGGCGGGCCGGGTGCGAAGGTAGTACATGCCGG 9567 Query 152776 TCTTGAGGCCACGTTGCCAGCCGTACATGTGCACCGACGCCATCTTAGCCAAAGTAGGGT 152835 |||||||||| ||||| |||| | ||||| ||| | | ||| || || | || | Sbjct 9568 TCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCGAACGAGGGCT 9627 Query 152836 CGGCCATGTACACGTTAAACGATTGACTTTGATCAATAAATGCGCCTCTATCTGCTGCCA 152895 || ||||||| ||||| | ||| || || || || || | || | ||| || |||| Sbjct 9628 CGCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGTAGGCCGAGCGATCAGCGGCCA 9687 Query 152896 TGTCGATCATGAATTTTCCGTTGTTGTGCCAGCATTCCCAGATTGTCATGTACAGCTTTT 152955 ||||||| |||| || | || | ||| ||||| | ||| |||||||||| | Sbjct 9688 TGTCGATGATGA------CG-CGCTGCGGGAGC--TCCCACACGGTCTTGTACAGCTTCT 9738 Query 152956 TAATGTTGTCGGGAATTTCATCTATG 152981 | |||| |||||| || || || ||| Sbjct 9739 TGATGTCGTCGGGGATCTCCTCGATG 9764 >seq40960 Length=530 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | ||| | || ||||| || || ||||| || ||| | Sbjct 261 CCGCCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 320 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || ||||| |||| || || ||||||||||| || Sbjct 321 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGCGGG 380 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || || | | || | ||||| | | ||| || Sbjct 381 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGCTCTCGACT 440 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||| |||| || || ||||| || |||||| Sbjct 441 TCGAGGGTGATAGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATA 488 >seq62514 Length=5924 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | || | ||| ||||| || || ||||| || ||| | Sbjct 4077 CCGCCGCGCAGACGAAGAACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 4136 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||| ||||| ||||||||||| || Sbjct 4137 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGGG 4196 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || || | | || | |||||| | | ||| ||| Sbjct 4197 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 4256 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||| || | || || ||||| || ||||| Sbjct 4257 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4303 >seq62774 Length=14773 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||| |||||||| || || Sbjct 8864 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 8805 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||||||||| || ||||| || ||||| ||| || || || Sbjct 8804 GCGAAGATGAGGCGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 8745 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | | ||| ||||| | ||| | |||||||||||||| || Sbjct 8744 ACGTTCTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGGTCAGGGTC 8685 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 8684 TTGACGAAGATCTGCATA 8667 >seq60456 Length=68670 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| || || | ||| |||||||| || || Sbjct 46940 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 46881 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || |||||||| || || |||||||| ||||| ||| || || || Sbjct 46880 GCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTC 46821 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | | ||| || || | ||| | |||||||||||||| || Sbjct 46820 ACGTTCTCAATGGTGTCGCTCGACTCGACTTCGAGGGTGATCGTCTTGCCGGTCAGGGTC 46761 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 46760 TTCACGAAGATCTGCATA 46743 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||| | || ||||| || || ||||| || ||| | Sbjct 46457 CCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 46398 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| |||||||| || || || |||| || || |||||||||||||| Sbjct 46397 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 46338 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| || || || || | | || | ||||| | | ||| ||| Sbjct 46337 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGTGTCTGAGCTCTCGACC 46278 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||| | || || ||||| || ||||| Sbjct 46277 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 46231 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||| | || ||||| || || ||||| || ||| Sbjct 47427 GCCACCGCGGAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 47368 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| || ||||| |||| ||||| ||||| |||||||| Sbjct 47367 CAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGG 47308 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || ||| || || || | | || | ||||| | | ||| || Sbjct 47307 AATACCCTCCTTATCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCCGAGCTCTCGAC 47248 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||||||||| | || || ||||| || |||||| Sbjct 47247 TTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 47199 >seq10324 Length=817 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| |||||||| || || || |||| || || |||||||| ||||| |||||||| || Sbjct 2 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCTTCCTT 61 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || || | | || | |||||| | | ||| ||||| | ||| | Sbjct 62 GTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCTACCTCGAGGGTGAT 121 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||||| ||| || || || || ||||| Sbjct 122 GGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 157 >seq61753 Length=5868 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| || ||| | |||| ||| |||||||| || || Sbjct 5708 GTCGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 5649 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| || || || |||||||| ||||| || || || || Sbjct 5648 GCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTC 5589 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | | ||| ||||| | ||| | ||||||||||||| || Sbjct 5588 ACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 5529 Query 139748 TTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 5528 TTCACAAAGATCTGCAT 5512 >seq59610 Length=50575 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/228 (71%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||||||||| ||||| || || || | || || | | ||||| | | | ||| Sbjct 5421 GAGGCCGTCGAGATTGAGAAGGAATTCGTGACCGAGTCGCTGCCCGTGGCCCTCATCGGC 5480 Query 52897 ATGAACG-CGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACT-GTTGATGC 52954 ||||||| ||||| | |||||| ||||||||||||| || || ||| | || | | || Sbjct 5481 ATGAACGCCGACC-TCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGCCGC 5539 Query 52955 AGCTCGGTCAGC-CGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATA 53013 ||||| | || ||| |||| || | ||||| || ||| ||| | ||| Sbjct 5540 -CCTCGG-CTGCGAGAAGCACTACAACCAGACCAACCCGTTCCCGTGGATGGAGCTCATC 5597 Query 53014 TCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || ||||||||||| || ||||| |||||| | || || ||||||||| Sbjct 5598 TCCCTCGAGGGCAAGACCAACTTCTTCGAGCGCCGCGTCGGCGAGTAC 5645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495674366531200