Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq59208 86.0 6e-12 >seq59208 Length=91934 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 99555 CGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGCTGCGG 99614 || || |||||| ||||| || ||||| ||||||| | ||||||||||| | || Sbjct 81244 CGTGGCGTTGAGGAGCAGGACTCCGCGCTGCGCCCACTCGGTGAGGCAGCCGTGGTTGGG 81185 Query 99615 CCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGG 99674 ||| | ||||||| | | || | | |||||||| |||| |||| ||||| Sbjct 81184 GCGCCGCCAGCCGGGGATGCTGCGCTCGAGCTCGGCGTAGATCTTCTTGAGGGATGGCGG 81125 Query 99675 GATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTA 99734 | || || || || |||| ||| | |||||||||||||| | | || ||| Sbjct 81124 CACCGCCACTCCCCGAGTCACCGAGAACGAGAGGCCGTGGGCCTGGTTCTCGTTGAAGTA 81065 Query 99735 GGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 |||||||| |||||||| || ||||| || Sbjct 81064 CGGGTCCTGCCCCAGGATCACCACCTTCAC 81035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440552895723360