Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq61669 120 3e-22 seq62514 118 9e-22 seq56988 114 1e-20 seq60456 113 4e-20 seq59302 113 4e-20 seq61753 107 2e-18 seq61437 107 2e-18 seq62774 105 6e-18 seq61614 98.7 8e-16 seq49488 95.1 1e-14 seq10324 91.5 1e-13 >seq61669 Length=1808 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | | ||| | || | ||||| || || || |||||||| ||| Sbjct 666 ATACCGCCGCGCAGACGAAGAACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 725 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || ||||| || || |||||| ||||||| ||||| || || || Sbjct 726 GCCAGCGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGGG 785 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || || | | || | |||||| | || ||| Sbjct 786 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCG 845 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | ||| ||||||||||| || || || || ||||||||| Sbjct 846 ACCTCGAGGGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 896 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || || || || ||||| || || ||| Sbjct 222 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 281 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| |||||||| || || || || ||||| || || Sbjct 282 GCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTCTGCTTC 341 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | | ||||| || | ||| | || ||||||||||| || Sbjct 342 ACGTTCTCGATCGTGTCTGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 401 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 402 TTGACGAAGATCTGCATG 419 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || |||||||| || | | || | || | || || || || || |||||||| ||| Sbjct 894 ATGCCGCCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCG 953 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| ||||||| ||||| || || || Sbjct 954 GCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCRGCGAAGATGAGRCGCTGCTGATCRGGR 1013 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || || | | || | |||||| | || ||| Sbjct 1014 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCG 1073 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || || || ||||| |||||||| Sbjct 1074 ACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 1123 >seq62514 Length=5924 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | | ||| | ||| | ||| || || || || |||||||| ||| Sbjct 3846 ATACCGCCGCGCAGACGAAGAACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCG 3905 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || || || || || || || ||| ||||||||||||| |||||||| Sbjct 3906 GCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGG 3965 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| || || | | |||| ||||||| | || ||| Sbjct 3966 GGGATGCCTTCCTTGTCCTGGATCTTCTGCTTAACGTTCTCAATGGTGTCGCTCGACTCG 4025 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| || || || || || || || || |||||||| Sbjct 4026 ACCTCGAGAGTAATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 4075 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | | ||| | ||| | ||| || || || || |||||||| ||| Sbjct 4074 ATACCGCCGCGCAGACGAAGAACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCG 4133 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || || || || || || || ||| ||||||||||||| || || || Sbjct 4134 GCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGG 4193 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || || | | || | ||||||| | || ||| Sbjct 4194 GGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCG 4253 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || || || || || |||||||| Sbjct 4254 ACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4303 >seq56988 Length=1639 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || || ||| || || || || |||||| Sbjct 254 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTACCA 313 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| || || ||||| || ||||| ||||| || || Sbjct 314 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 373 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| || ||||| || | ||| | || ||||||||||| || Sbjct 374 ACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 433 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 434 TTGACGAAGATCTGCATG 451 >seq60456 Length=68670 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || ||||| || || || || || || Sbjct 46940 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 46881 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| || || || || |||||||| ||||| ||||| || || Sbjct 46880 GCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTC 46821 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| | || ||||| || | ||| | ||| ||||||||||| || Sbjct 46820 ACGTTCTCAATGGTGTCGCTCGACTCGACTTCGAGGGTGATCGTCTTGCCGGTCAGGGTC 46761 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 46760 TTCACGAAGATCTGCAT 46744 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | | || | || | || || ||||| || |||||||| ||| Sbjct 47201 ATACCGCCGCGCAGACGGAGGACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCG 47142 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| ||||||||||||| || || ||| Sbjct 47141 GCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGA 47082 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| || || | | || | |||||| | | ||| Sbjct 47081 GGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCTGAGCTCTCG 47022 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || ||||| ||||| || || || || ||||||||| Sbjct 47021 ACTTCGAGGGTAATAGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 46971 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || || || || || || || || ||| Sbjct 47396 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 47337 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| |||||||| || || || || ||||| || || Sbjct 47336 GCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTCTGCTTG 47277 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | | ||||| || | ||| | || |||||||| || || Sbjct 47276 ACGTTCTCGATCGTGTCCGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 47217 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 47216 TTCACGAAGATCTGCAT 47200 >seq59302 Length=3966 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | | ||| | || | || || || || || |||||||| ||| Sbjct 2203 ATACCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 2144 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| || || || || || || ||| ||||||||||||| || || ||| Sbjct 2143 GCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCGGGA 2084 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || || | | || | ||||||| | || ||| Sbjct 2083 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGCTCGACTCG 2024 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||||||||| || || || || |||||||| Sbjct 2023 ACCTCGAGGGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1974 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || || || || |||||||| ||| Sbjct 1975 ATACCACCACGCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCG 1916 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || || || || |||||||| ||||||| ||||| ||||| || Sbjct 1915 GCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCAGGG 1856 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || || | | || | ||||| | | ||| Sbjct 1855 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTCTCG 1796 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || ||||||||||| || || || || ||||||||| Sbjct 1795 ACTTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATG 1745 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || || || || || || ||| ||||||| ||||| || || ||||| ||||| || ||| Sbjct 1444 TCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTG 1385 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || || | | || | |||||| | || ||||| || | ||| | Sbjct 1384 TCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATA 1325 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||||||||| || || || || |||||||| Sbjct 1324 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1290 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | ||||| || || || || || || Sbjct 2398 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 2339 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| || || ||||| || ||||| ||||| || || Sbjct 2338 GCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 2279 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | ||||| | | ||||| || | ||| | || |||||||| || || Sbjct 2278 ACATTTTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTC 2219 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 2218 TTGACGAAGATCTGCAT 2202 >seq61753 Length=5868 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| ||| | || || || || || || || || Sbjct 5708 GTCGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 5649 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| || || |||||||| ||||| |||||| || || Sbjct 5648 GCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTC 5589 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || ||||| || | ||| | || ||||||||||| || Sbjct 5588 ACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 5529 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 5528 TTCACAAAGATCTGCAT 5512 >seq61437 Length=178460 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | | ||| | || | || || || || || |||||||| || Sbjct 48510 ATACCGCCGCGCAGACGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 48451 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || |||||| ||||||| ||||| ||||| ||| Sbjct 48450 GCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGA 48391 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || || | | || | |||||| | || ||| Sbjct 48390 GGAATGCCCTCCTTGTCTTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCG 48331 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | ||| | || ||||||||||| || || || || |||||||| ||| Sbjct 48330 ACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTGCT 48277 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || || || || || || ||| Sbjct 48705 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 48646 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| |||||||| || || ||||| ||||| || ||| Sbjct 48645 GCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTT 48586 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| | || ||||| || | || | ||| || || || || || Sbjct 48585 ACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGTGAGGGTC 48526 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 48525 TTGACGAAGATCTGCAT 48509 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | || | || || || || || |||||||| ||| Sbjct 48966 ATACCGCCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCG 48907 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || || || || || || ||| ||||||| ||||| || || ||| Sbjct 48906 GCCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGA 48847 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || || | | || | |||||| | || ||| Sbjct 48846 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCG 48787 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| || || || || || |||||||| Sbjct 48786 ACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 48737 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || || || || || |||||| Sbjct 49161 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCA 49102 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || || ||||| ||||| || ||||| ||||| || || Sbjct 49101 GCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 49042 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | | ||||| || | ||| | || ||||| |||||||| Sbjct 49041 ACGTTCTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATAGTCTTGCCCGTCAGAGTC 48982 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 48981 TTGACGAAGATCTGCAT 48965 >seq62774 Length=14773 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || || || || || || || || ||| Sbjct 8636 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCGAGCTGCTTGCCA 8577 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| |||||||| || || || || ||||| || || Sbjct 8576 GCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTCTGCTTG 8517 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || ||||| || | || | ||| ||||| || ||||| Sbjct 8516 ACGTTCTCAATCGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCCGTGAGAGTC 8457 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 8456 TTGACGAAGATCTGCATG 8439 >seq61614 Length=59386 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || || || || || || || Sbjct 2307 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 2366 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| |||||||| || |||||||| ||||| ||||| || || Sbjct 2367 GCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTC 2426 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| | || ||||| || | || | ||| || || || || || Sbjct 2427 ACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGTGAGGGTC 2486 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 2487 TTGACGAAGATCTGCAT 2503 >seq49488 Length=478 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | | ||| | || | ||| || || || || |||||||| ||| Sbjct 312 ATACCGCCGCGCAGACGAAGAACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 253 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || || || || || || |||||| ||||||||||||| || || || Sbjct 252 GCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGG 193 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||||| || | | || | ||||| | | ||| Sbjct 192 GGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCCGAGCTCTCG 133 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || || || || || |||||||| Sbjct 132 ACTTCGAGGGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 83 >seq10324 Length=817 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || || || || || || ||| ||||||| ||||| || || ||||| |||||||| ||| Sbjct 3 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCTTCCTTG 62 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || || | | || | |||||| | || || || || | ||| | Sbjct 63 TCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCTACCTCGAGGGTGATG 122 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||||||||| || || ||||| |||||||| Sbjct 123 GTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419812655299632