Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq62057 87.8 2e-12 >seq62057 Length=255147 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 21749 CCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGGGATGAT 21807 ||| | || |||||||||||| |||| || ||||||| | || || || || || || Sbjct 114231 CCCCAGATCGGCGACAAGTTCAGTTCGCGCCATGGCCAA-AAGGGTACGGTGGGCATCAT 114173 Query 21808 CTATTCGCAAGAAAACATGCCATTCA-CATCTTCCGGCATGACCCCCGACATCATCATCA 21866 || ||| || ||||||| |||| |||| ||||| ||||||||||||||| ||| Sbjct 114172 GTACCGGCAGGAGGACATGCCCTTCAACATCGAA-GGCATCACCCCCGACATCATCGTCA 114114 Query 21867 ACCCCAACTGCATTCCCTCCAGAATGACCAT 21897 |||| || ||||||||| | |||||||| Sbjct 114113 ACCCGCACGCCATTCCCTCGCGTATGACCAT 114083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521135952008480