Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq59302 136 3e-27 seq60456 127 2e-24 seq61669 125 6e-24 seq49488 122 8e-23 seq62774 120 3e-22 seq61753 118 9e-22 seq61437 118 9e-22 seq56988 118 9e-22 seq61614 114 1e-20 seq10324 102 7e-17 seq60152 96.9 3e-15 >seq59302 Length=3966 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | ||||| || || || || || | Sbjct 1974 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTCGAGGTCGAGTCGAGC 2033 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || || ||||| || ||||| || |||||||| Sbjct 2034 GACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 2093 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || ||| || ||| | |||| |||||| Sbjct 2094 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTACAAC 2153 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || | ||| | ||| |||| || || || Sbjct 2154 ATCCAGAAGGAGTCCACCCTCCACCTCGTTCTTCGTCTGCGCGGCGGTAT 2203 Score = 116 bits (128), Expect = 3e-21 Identities = 168/236 (71%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 26983 ACGCCA-TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAA 27041 |||||| ||||||| || || || || |||||||||||| |||| || || || || || Sbjct 1284 ACGCCAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTCGAG 1343 Query 27042 CCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCC 27101 || |||| |||| |||| || || || || || || ||||| || ||||| || || Sbjct 1344 TCGAGCGACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCT 1403 Query 27102 GATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGAT 27161 ||||| ||||| | || | ||| ||||| || | || ||| | ||| | | || Sbjct 1404 GATCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGAC 1463 Query 27162 TACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || |||||||| ||| | || | || | ||| |||| || || || Sbjct 1464 TACAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTGCGCGGCGGTAT 1519 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||||||| | ||||| || ||||| || || Sbjct 1745 CATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATTACCCTCGAAGTCGAGAGCTC 1804 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| |||| || || || || || || ||||| || ||||| || || || || Sbjct 1805 GGACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 1864 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | || || || || | || ||| | ||| | |||| ||||| Sbjct 1865 GCAGCGCCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAA 1924 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||||||||| | || | || | ||| |||| ||||| || Sbjct 1925 CATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTGCGTGGTGGTAT 1975 >seq60456 Length=68670 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || ||||| || || | Sbjct 46744 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACGATCACCCTCGAAGTCGAGTCGAGC 46803 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || ||||| |||||||| || || ||||| Sbjct 46804 GACACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCTGATCAG 46863 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | ||| | |||| |||||| Sbjct 46864 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAAC 46923 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | || | || |||||||| Sbjct 46924 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGCCTCCGCGGTGGCAT 46973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || ||||| || || Sbjct 46459 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCG 46518 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| || || || || ||||| || || || || ||||| || Sbjct 46519 GACACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 46578 Query 27108 CAGCGTTTAATATACGCCGGC 27128 ||||| | || | ||||||| Sbjct 46579 CAGCGCCTCATCTTCGCCGGC 46599 >seq61669 Length=1808 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || || |||||||||||| | ||||| || || || || | Sbjct 899 CGGCATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATTACCCTCGAGGTCGAGTC 840 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 | |||| |||| |||| ||||| || || || || ||||| || ||||| || || || Sbjct 839 GAGCGACACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 780 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| ||||| | || | ||| ||||| || | || ||| | || | |||| || Sbjct 779 TCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACGCTGGCCGACTA 720 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || |||||||| ||| | || | ||| | ||| |||| || || || Sbjct 719 CAACATCCAGAAGGAGTCTACCCTCCACCTCGTTCTTCGTCTGCGCGGCGGTAT 666 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||||||| | || || || ||||| || || Sbjct 419 CATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTC 360 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| |||| || || || || || || || || || || || || ||||| || Sbjct 359 AGACACGATCGAGAACGTGAAGCAGAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCA 300 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || | || ||| | ||| | |||| ||||| Sbjct 299 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGGCCGACTACAA 240 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | || | || | ||| |||| || ||||| Sbjct 239 CATCCAGAAGGAGTCCACCCTCCACCTCGTCCTTCGTCTGCGCGGCGGCAT 189 Score = 109 bits (120), Expect = 5e-19 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || || || || || || || | Sbjct 1123 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 1064 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || || ||||| || ||||| || || ||||| Sbjct 1063 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCYCCYGATCAG 1004 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || ||| | || | |||| |||||| Sbjct 1003 CAGCGYCTCATCTTCGCYGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 944 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | ||| | || || ||||| Sbjct 943 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGTGGCGGCAT 894 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | |||||||| || || || || | Sbjct 667 ATGCAGATCTTCGTCAAGACTCTCACGGGCAAGACGATTACTCTCGAGGTCGAGTCGAGC 608 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || ||||| || ||||| || ||||| || Sbjct 607 GACACCATTGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 548 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| || | || ||| | || | |||| |||||| Sbjct 547 CAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 488 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 487 ATCCAGAAGGAGTCGAC 471 >seq49488 Length=478 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | ||||| || ||||| || || Sbjct 83 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACCCTCGAAGTCGAGAGCTCG 142 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || ||||| || || ||||| || || || || |||||||| Sbjct 143 GACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAG 202 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || ||| | ||| | |||| |||||| Sbjct 203 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAAC 262 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | ||| | ||| |||| || || || Sbjct 263 ATCCAGAAGGAGTCGACGCTCCACCTCGTTCTTCGTCTGCGCGGCGGTAT 312 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||| ||| | || ||||| || || || || Sbjct 311 ATGCAGATCTTCGTCAAGACTCTGACCGGTAAGACGATCACTCTCGAGGTCGAGAGCTCG 370 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| || || || || ||||| || || || || || || || Sbjct 371 GACACGATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAG 430 Query 27108 CAGCGTTTAATATACGCCGGCAAACA 27133 ||||| | || | ||||||||| || Sbjct 431 CAGCGCCTCATCTTCGCCGGCAAGCA 456 >seq62774 Length=14773 Score = 120 bits (132), Expect = 3e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || ||||| || |||||| | |||||||| || || || | Sbjct 8436 CGGCATGCAGATCTTCGTCAAGACTCTCACGGGCAAGACGATTACTCTCGAGGTCGAGTC 8495 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 | |||| ||||||||| ||||| || || || || || || || || || || ||||| Sbjct 8496 GAGCGACACGATTGAGAACGTCAAGCAGAAGATCCAGGATAAGGAGGGTATTCCTCCCGA 8555 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || |||||| | || | ||| ||||| || | || ||| | || | |||| || Sbjct 8556 CCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTGGCCGACTA 8615 Query 27164 CAACATTCAAAAGGAGTCGAC 27184 |||||| || ||||||||||| Sbjct 8616 CAACATCCAGAAGGAGTCGAC 8636 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || || Sbjct 8668 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACCCTCGAGGTCGAGAGCTCG 8727 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || || ||||| || ||||| || |||||||| Sbjct 8728 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCAG 8787 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | || | |||| |||||| Sbjct 8788 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 8847 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || |||||||| ||| | || | || | || | || ||||||| Sbjct 8848 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTCCGCGGTGGCA 8896 >seq61753 Length=5868 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||||||| | || || || || || || || | Sbjct 5512 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 5571 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || ||||| ||||| |||||||| || || || || Sbjct 5572 GACACGATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 5631 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | || | |||| |||||| Sbjct 5632 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 5691 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || |||||||| | || | || | || | || |||||||| Sbjct 5692 ATCCAGAAAGAGTCGACTCTCCACCTCGTCCTCCGCCTCCGTGGTGGCAT 5741 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||||||| | || || || ||||| || || Sbjct 5739 CATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTC 5798 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || |||| || || || || || || ||||| || ||||| || |||||||| Sbjct 5799 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGATCA 5858 Query 27107 ACAGCG 27112 ||||| Sbjct 5859 GCAGCG 5864 >seq61437 Length=178460 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 || |||||||| || || || || |||||||||||| | || || || || || || || Sbjct 48278 GCAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCG 48337 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 |||| |||| |||| || || || || || |||||||| || ||||| || ||||| Sbjct 48338 AGCGACACGATCGAGAACGTGAAGCAGAAGATCCAAGACAAGGAGGGCATTCCTCCCGAC 48397 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || ||||| | || | ||| ||||| || | || ||| | ||| | | || ||| Sbjct 48398 CAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTAC 48457 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || |||||||| ||| | || | ||| | ||| |||| || || || Sbjct 48458 AACATCCAGAAGGAGTCCACCCTCCACCTCGTTCTTCGTCTGCGCGGCGGTAT 48510 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || || ||||| || || | Sbjct 48737 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAAGTCGAGTCGAGC 48796 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || || ||||| || ||||| || || ||||| Sbjct 48797 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAG 48856 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | ||| | |||| |||||| Sbjct 48857 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGGCCGACTACAAC 48916 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 48917 ATCCAGAAGGAGTCGAC 48933 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | |||||||| || || || || | Sbjct 48509 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATTACTCTCGAGGTCGAGTCGAGC 48568 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || ||||| || || || || ||||| || Sbjct 48569 GACACCATTGAGAACGTAAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 48628 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || ||| | ||| | |||| |||||| Sbjct 48629 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAAC 48688 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | ||| |||| ||||| || Sbjct 48689 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTGCGCGGTGGTAT 48738 >seq56988 Length=1639 Score = 118 bits (130), Expect = 9e-22 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || || || || || ||| | ||||||||||| || || | Sbjct 682 CGGCATGCAGATCTTCGTGAAGACACTCACGGGTAAGACGATTACTCTTGAGGTCGAGTC 623 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 | |||| |||| |||| || || || || || || ||||| || ||||| || || || Sbjct 622 GAGCGACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 563 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| |||||| | || | ||||||||| || | || ||| | || | |||| || Sbjct 562 TCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTA 503 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || || |||||||| | || | || | || | || |||||||| Sbjct 502 CAACATCCAGAARGAGTCGACTCTCCACCTCGTCCTCCGCCTCCGTGGTGGCAT 449 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||||||| | || || || || || || |||| Sbjct 451 CATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTC 392 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || |||| || || || || || || ||||| || ||||| || ||||| || Sbjct 391 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 332 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| || || || | || ||| || ||| | |||| ||||| Sbjct 331 GCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGGCCGACTACAA 272 Query 27167 CATTCAAAAGGAGTCGACC 27185 ||| || |||||||| ||| Sbjct 271 CATCCAGAAGGAGTCCACC 253 >seq61614 Length=59386 Score = 114 bits (126), Expect = 1e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || || || || || || || Sbjct 2959 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGAGCTCG 2900 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| || || ||||| ||||| || ||||| || |||||||| Sbjct 2899 GACACGATCGAGAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 2840 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || ||| | || | |||| |||||| Sbjct 2839 CAGCGCCTCATCTTCGCYGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAAC 2780 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | ||| | ||| |||| || || || Sbjct 2779 ATCCAGAAGGAGTCGACTCTCCACCTCGTTCTTCGTCTGCGCGGCGGTAT 2730 >seq10324 Length=817 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||||||| | || || || || || || || | Sbjct 157 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTAGAGTCGAGC 98 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || || ||||| |||||||| || || ||||| Sbjct 97 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCTGATCAG 38 Query 27108 CAGCGTTTAATATACGCCGGCAAACA 27133 ||||| | || | ||||||||| || Sbjct 37 CAGCGCCTCATCTTCGCCGGCAAGCA 12 >seq60152 Length=76952 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || ||||| || ||| | || || || || || || || Sbjct 63152 CATGCAAATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGTCGAG 63211 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || |||| || || || || || || ||||| || ||||| || || ||||| Sbjct 63212 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCA 63271 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||||||||| || | || ||| | || | |||| ||||| Sbjct 63272 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCCGACTACAA 63331 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 63332 CATCCAGAAGGAGTCGAC 63349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434576793342720