Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq62514 114 1e-20 seq59302 114 1e-20 seq61669 113 4e-20 seq60152 109 5e-19 seq56988 109 5e-19 seq62774 107 2e-18 seq61753 107 2e-18 seq61437 105 6e-18 seq61614 100 2e-16 seq56980 100 2e-16 seq60456 98.7 9e-16 seq10324 95.1 1e-14 >seq62514 Length=5924 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 4100 ATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTG 4159 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || ||||||||||| |||| ||| | | ||| |||||| ||| || Sbjct 4160 CTTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGGGATACCCTCCTTGTCCTGGATCTT 4219 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 ||| || | || | | || ||||||||||| || || | ||||| | || || || Sbjct 4220 CTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 4279 Query 39261 CAGCGTTTTAACAAAGATTTGCATCTTT 39288 || || || || ||||| |||||| || Sbjct 4280 GAGGGTCTTCACGAAGATCTGCATCGTT 4307 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| |||||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 3872 ATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTG 3931 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || |||||||||||||| | ||| | || || |||||| ||| || Sbjct 3932 CTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTT 3991 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 ||| || | || | | || ||||||||||| || || | || || | || ||||| Sbjct 3992 CTGCTTAACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGT 4051 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 4052 GAGGGTCTTGACGAAGATCTGCAT 4075 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 3645 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 3704 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| ||| | | ||| |||||| ||| ||| Sbjct 3705 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 3764 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||| ||| || || | ||||| | || || ||| Sbjct 3765 TGCTTCACGTTCTCGATCGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTACCGGTC 3824 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 3825 AGGGTCTTGACGAAGATCTGCAT 3847 >seq59302 Length=3966 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2176 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGC 2117 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || ||||||||||| |||| || | || ||| |||||| ||| ||| Sbjct 2116 TTGCCCGCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 2057 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || |||| || | | || ||||||||||| || || | || || | || || ||| Sbjct 2056 TGCTTGACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATGGTCTTGCCGGTC 1997 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1996 AGGGTCTTGACGAAGATCTGCAT 1974 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 1492 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGC 1433 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || || |||||||| || | || | || ||| |||||| ||| ||| Sbjct 1432 TTGCCCGCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1373 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | |||||| | || || ||| Sbjct 1372 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATAGTCTTGCCGGTC 1313 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1312 AGGGTCTTCACGAAGATCTGCAT 1290 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| || ||||| ||||| || || Sbjct 1709 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1650 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || || |||||| ||| ||||| |||| | Sbjct 1649 GATGAGGCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTT 1590 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | || || | || ||||| || || || || Sbjct 1589 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGAC 1530 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1529 GAAGATCTGCAT 1518 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || ||||| Sbjct 1937 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCAAA 1878 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| ||||| || | | Sbjct 1877 GATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1818 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | ||| || ||| ||| || || | || || | || || |||||||| || Sbjct 1817 CTCGATCGTGTCCGAGCT---CTCGACTTCGAGGGTAATGGTCTTGCCGGTCAGCGTCTT 1761 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 1760 GACGAAGATCTGCAT 1746 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 2404 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGC 2345 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 2344 TTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 2285 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | | | | ||| || ||| ||| || || | ||||| | || || Sbjct 2284 TGCTTCACATTTTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCG 2228 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || ||||| ||||| Sbjct 2227 GTGAGCGTCTTGACGAAGATCTGCAT 2202 >seq61669 Length=1808 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| ||||| Sbjct 476 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAA 535 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | || ||| |||||| ||| ||||| || | | Sbjct 536 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 595 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | || || | || ||||| || || || || Sbjct 596 CTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCCGTGAGAGTCTTGAC 655 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 656 GAAGATCTGCAT 667 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| ||||| || || Sbjct 704 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 763 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | ||| | || ||| |||||| ||| ||||| |||| | Sbjct 764 GATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTT 823 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | || || | || || ||||| || || || Sbjct 824 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTAATCGTCTTGCCGGTCAGGGTCTTGAC 883 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 884 GAAGATCTGCAT 895 Score = 109 bits (120), Expect = 5e-19 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 932 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCRGCGAA 991 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | || | || ||| |||||| ||| ||||| || | | Sbjct 992 GATGAGRCGCTGCTGATCRGGRGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1051 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || || || || || || Sbjct 1052 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 1111 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 1112 AAAGATCTGCAT 1123 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| |||||||| Sbjct 216 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGC 275 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | | ||| || ||| ||| ||| Sbjct 276 TTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTC 335 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | ||| || ||| ||| || || | ||||| | || || Sbjct 336 TGCTTCACGTTCTCGATCGTGTCTGAGCT---CTCGACTTCGAGGGTGATGGTCTTGCCG 392 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| ||||| Sbjct 393 GTCAGGGTCTTGACGAAGATCTGCAT 418 >seq60152 Length=76952 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 63344 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 63285 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | ||| | || ||| |||||| ||| ||||| || | | Sbjct 63284 GATGAGGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 63225 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 63224 CTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 63165 Query 39273 AAAGATTTGCATCTT 39287 ||||||||||| || Sbjct 63164 GAAGATTTGCATGTT 63150 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 63572 CTCTTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 63513 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 63512 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 63453 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||| || || || || | ||||| | || || ||||| || || || Sbjct 63452 CTCGATGGTGTCGGAGGATTCGACCTCGAGGGTGATCGTCTTACCGGTCAGGGTCTTGAC 63393 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 63392 GAAGATCTGCAT 63381 >seq56988 Length=1639 Score = 109 bits (120), Expect = 5e-19 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 487 CTCYTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 546 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | ||| | || ||| |||||| ||| ||||| || | | Sbjct 547 GATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 606 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | || || | || ||||| || || || || Sbjct 607 CTCGATCGTGTCGCTCGACTCGACCTCAAGAGTAATCGTCTTACCCGTGAGTGTCTTCAC 666 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 667 GAAGATCTGCAT 678 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 704 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 763 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| |||| || | || ||| |||||| ||| ||| Sbjct 764 TTGCCRGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTC 823 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || || || Sbjct 824 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCAACCTCGAGGGTGATGGTCTTGCCTGTG 883 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || |||||||| ||||| Sbjct 884 AGGGTCTTCACAAAGATCTGCAT 906 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 248 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGC 307 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || || || ||||||||||||| || | || ||| |||||| ||| ||| Sbjct 308 TTACCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 367 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||| |||||| || || | ||||| | || || ||| Sbjct 368 TGCTTCACGTTCTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 427 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 428 AGGGTCTTGACGAAGATCTGCAT 450 >seq62774 Length=14773 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 8631 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 8572 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| || | | ||| || ||| ||| ||||| |||| | Sbjct 8571 GATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTCTGCTTGACGTT 8512 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | || || | || ||||| || || || || Sbjct 8511 CTCAATCGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCCGTGAGAGTCTTGAC 8452 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 8451 GAAGATCTGCAT 8440 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 8414 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGC 8355 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| || | || | || || |||| ||| ||| Sbjct 8354 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCTTCCTTGT----GATCTTC 8299 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | |||||||||||||| || || | ||||| | || || || Sbjct 8298 TGCTTCACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATCGTCTTGCCAGTG 8239 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 8238 AGGGTCTTCACGAAGATCTGCAT 8216 >seq61753 Length=5868 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 5703 CTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 5644 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || || |||||| || ||||| || | | Sbjct 5643 GATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTT 5584 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 5583 CTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 5524 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 5523 AAAGATCTGCAT 5512 >seq61437 Length=178460 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| || ||||| Sbjct 48483 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGC 48424 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | || ||| ||||| ||| ||| Sbjct 48423 TTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTC 48364 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | ||||| | || || ||| Sbjct 48363 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTC 48304 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 48303 AGGGTCTTCACGAAGATCTGCAT 48281 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 48700 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 48641 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| || | | ||| |||||| ||| ||||| || | | Sbjct 48640 GATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTTACGTT 48581 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | || || | || ||||| || || || || Sbjct 48580 CTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGTGAGGGTCTTGAC 48521 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 48520 GAAGATCTGCAT 48509 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| | || || |||| || ||||| ||||| || || Sbjct 48928 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 48869 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | || | || ||| |||||| ||| ||||| || | | Sbjct 48868 GATGAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 48809 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| ||||||||||| || || | ||||| | || || || || || || || Sbjct 48808 CTCGATCGTGTCGCTCGACTCGACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 48749 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 48748 GAAGATCTGCAT 48737 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 49167 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 49108 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || || || || ||||||||||| || | || | || ||| |||||| ||| ||| Sbjct 49107 TTACCAGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTC 49048 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || |||| || | | ||| || ||| ||| || || | |||||| | || ||| Sbjct 49047 TGCTTGACGTTCTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATAGTCTTGCCC 48991 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| ||||| Sbjct 48990 GTCAGAGTCTTGACGAAGATCTGCAT 48965 >seq61614 Length=59386 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2301 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 2360 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | || | || || |||||| ||| ||| Sbjct 2361 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTC 2420 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||||||||| || || | || || | || ||||| Sbjct 2421 TGCTTCACGTTCTCAATGGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTACCCGTG 2480 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 2481 AGGGTCTTGACGAAGATCTGCAT 2503 Score = 100 bits (110), Expect = 2e-16 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || || ||| || || || || || ||||| || || || |||| || ||||| Sbjct 2529 TGGAGMGTSGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 2588 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| |||| || | || || |||||| ||| ||| Sbjct 2589 TTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTC 2648 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| ||||||||||| || || | || || | || ||||| Sbjct 2649 TGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCCGTG 2708 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 2709 AGGGTCTTGACGAAGATCTGCAT 2731 >seq56980 Length=1463 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1063 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGC 1004 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || |||||||| || | ||| | || ||| |||||| ||| ||| Sbjct 1003 TTGCCGGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 944 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||||||||| || || | ||||| | || || || Sbjct 943 TGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACTTCGAGGGTGATGGTCTTGCCAGTG 884 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 883 AGGGTCTTCACGAAGATCTGCAT 861 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 1291 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCGAGCTGC 1232 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | | ||| |||||| ||| ||| Sbjct 1231 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 1172 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | || ||||||||||| || || | || || | || || ||| Sbjct 1171 TGCTTCACGTTCTCGATGGTGTCGCTCGACTCAACCTCGAGAGTAATCGTCTTACCGGTC 1112 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 1111 AGGGTCTTGACGAAGATCTGCAT 1089 >seq60456 Length=68670 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 46935 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 46876 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||| || | ||| | || || |||||| ||| ||||| || | | Sbjct 46875 GATGAGGCGCTGCTGATCAGGGGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTT 46816 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || ||||||||||| || || | ||||| | || || ||||| || || || Sbjct 46815 CTCAATGGTGTCGCTCGACTCGACTTCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTCAC 46756 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 46755 GAAGATCTGCAT 46744 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| |||||| || || || || ||||| || || || |||| || ||||| Sbjct 47174 TGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGC 47115 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || ||||||||||| || | || | || || |||||| ||| ||| Sbjct 47114 TTGCCGGCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTGGATCTTC 47055 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | || | | || || ||| ||| || || | || ||| | || ||| Sbjct 47054 TGCTTCACGTTCTCGATGGTGTCTGAGCT---CTCGACTTCGAGGGTAATAGTCTTGCCC 46998 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| ||||| Sbjct 46997 GTCAGGGTCTTGACGAAGATCTGCAT 46972 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || |||| || ||||| Sbjct 47402 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCGAGCTGC 47343 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| || | | ||| || ||| ||| ||| Sbjct 47342 TTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTC 47283 Query 39202 TGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || |||| || | | ||| || ||| ||| || || | ||||| | || || Sbjct 47282 TGCTTGACGTTCTCGATCGTGTCCGAGCT---CTCGACTTCGAGGGTGATGGTCTTGCCG 47226 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || ||||| ||||| Sbjct 47225 GTGAGGGTCTTCACGAAGATCTGCAT 47200 >seq10324 Length=817 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 39128 CGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTT 39187 |||| || ||||| ||||| || || || || |||||||| || | || | || || | Sbjct 1 CGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCAGGAGGGATGCCTTCCT 60 Query 39188 TGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 ||||| ||| ||||| || | || | | ||| ||||||||||| || || | |||| Sbjct 61 TGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCTACCTCGAGGGTGA 120 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || || |||||||| || |||||||| ||||| Sbjct 121 TGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429216648073268