Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq24030 132 4e-26 seq22955 122 7e-23 seq22211 122 7e-23 seq18730 122 7e-23 seq23826 120 3e-22 seq23480 118 9e-22 seq19772 116 3e-21 seq18924 113 4e-20 seq23068 111 1e-19 seq23603 107 2e-18 seq23925 96.9 3e-15 seq22901 89.7 4e-13 seq19654 82.4 6e-11 >seq24030 Length=66970 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | || || | || | ||| ||||||||||||||||| ||||| Sbjct 65960 GTTGCCACCACGAAGACGAAGGACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTC 66019 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| || ||||||| ||||| ||||| || | ||||| | ||||||||| Sbjct 66020 AGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCAGG 66079 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | || |||||||| |||||| || ||||| | ||| ||||| | | ||| Sbjct 66080 GGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTATCGCTAGACTC 66139 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||| || |||||||| || || || ||||| || || ||||| Sbjct 66140 GACTTCGAGGGTGATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 66190 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| ||| Sbjct 66420 CCACCACGAAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 66479 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| || || || | || || | ||||||||| ||| Sbjct 66480 AGGGTACGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 66539 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || ||||| | ||| ||||| | | ||| Sbjct 66540 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTATCGCTAGACTCGACC 66599 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||| || || || ||||| || || ||||| Sbjct 66600 TCGAGGGTAATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 66646 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | || |||||||| || ||||| ||||| || Sbjct 66192 CCTCCGCGCAGGCGAAGCACGAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCG 66251 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || || | ||||||||| ||| Sbjct 66252 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 66311 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || ||||| | ||| || ||| || ||| Sbjct 66312 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCAGAGGACTCGACC 66371 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || ||||| || || ||||| Sbjct 66372 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 66418 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| ||||||||||||||||| ||||| ||| Sbjct 66830 CCACCGCGCAGGCGAAGCACAAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGCC 66889 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || |||| || ||||| ||||| || | || || | ||||||||| ||| Sbjct 66890 AGGGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 66949 Query 21069 ACGCCTTCCTTGTC 21082 | || |||||||| Sbjct 66950 ATACCCTCCTTGTC 66963 >seq22955 Length=9686 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | || | || ||||||||||| ||||| ||||| || Sbjct 8154 CCTCCACGCAGGCGGAGCACGAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGCA 8213 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| || || || | ||||| | ||||||||| ||| Sbjct 8214 AGCGTACGACCGTCCTCAAGCTGCTTACCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGA 8273 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || ||||| | ||| ||||| | | ||| | Sbjct 8274 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACT 8333 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||| ||||| || || ||||| || || ||||| Sbjct 8334 TCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 8380 Score = 118 bits (130), Expect = 9e-22 Identities = 168/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 8382 CCGCCACGCAGACGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8441 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || || | ||||||||| ||| Sbjct 8442 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 8501 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CGT 21127 | ||| |||||||| ||||||||| ||||| | ||| || || || |||| || Sbjct 8502 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTTTCGATCGTGTC--CGAGCTCTCGA 8559 Query 21128 T-TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||||||||| | || || || || || ||||| ||| Sbjct 8560 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGTTG 8612 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||||| | || | || |||||||| || ||||| ||||| Sbjct 7659 GTTGCCACCACGAAGGCGAAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 7718 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| || ||||||| ||||| ||||| || | ||||| | ||||||||| Sbjct 7719 GGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGG 7778 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | || |||||||| |||||||||||| || | ||| ||||| | | ||| Sbjct 7779 GGGAATACCCTCCTTGTCCTGGATCTTTTGTTTAACGTTCTCGATGGTATCGCTCGACTC 7838 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTG 21161 || | ||| || ||||||||||| || || ||| Sbjct 7839 GACCTCAAGGGTGATCGTCTTGCCGGTCAAGGTCTTG 7875 >seq22211 Length=15201 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||| | || | || ||||||||||||||||| ||||| ||| Sbjct 4429 CCTCCACGCAGGCGGAGCACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGCC 4370 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 4369 AGCGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 4310 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || ||||| | ||| ||||| | | ||| | Sbjct 4309 ATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACT 4250 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||| ||||| || || ||||| || || ||||| Sbjct 4249 TCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 4203 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| |||||||| || ||||| ||||| ||| Sbjct 4201 CCTCCACGCAGACGAAGCACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 4142 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||||||||| ||| Sbjct 4141 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 4082 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CGT 21127 | ||| |||||||| ||||||||| ||||| | ||| || || || |||| || Sbjct 4081 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTTTCGATGGTGTC--CGAGCTCTCGA 4024 Query 21128 T-TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | || || || || || ||||| Sbjct 4023 CCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 3975 >seq18730 Length=7279 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 350 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCG 291 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||||||||| ||| Sbjct 290 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 231 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||||| ||||| | ||| ||||| | | ||| | Sbjct 230 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACT 171 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||||||||||| || | || ||||| || || ||||| Sbjct 170 TCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 124 >seq23826 Length=10614 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | |||||| | || | |||||||||||| || ||||| ||||| Sbjct 8979 GTTGCCACCACGAAGGCGGAGCACAAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAGTC 8920 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 || ||||| || ||||||| ||||| || ||||| | || || | ||||||||| Sbjct 8919 GGCAAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGGTCGGG 8860 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | || |||||||| ||||||||| ||||| | | | ||| || || ||| Sbjct 8859 GGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCAATAGTGTCCGAGGACTC 8800 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | || || || || || ||||| Sbjct 8799 GACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 8749 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| || ||||||| ||||| || ||| Sbjct 8717 GTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCAAGCTGCTTACCC 8658 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | ||| |||||||| |||||| || ||| Sbjct 8657 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTC 8598 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| ||||| | | ||| ||| | ||||||||||| || || || || Sbjct 8597 ACGTTCTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCAGTCAAAGTC 8538 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 8537 TTGACGAAGATCTGCAT 8521 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | || |||||||| || ||||| ||||| || Sbjct 8519 CCGCCACGCAGACGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8460 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| || ||||| | ||||| | |||||| || ||| Sbjct 8459 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGCTGCTGATCGGGGGGA 8400 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||||| ||||| | ||| || || || ||| Sbjct 8399 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTTTCGATGGTGTCCGAGGACTCGACC 8340 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| || ||||||||||| | || || || || || ||||| ||| Sbjct 8339 TCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATATTG 8289 >seq23480 Length=26370 Score = 118 bits (130), Expect = 9e-22 Identities = 168/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 13236 CCTCCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 13295 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| || ||||| | ||||| | |||||| || ||| Sbjct 13296 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGCTGCTGATCGGGGGGA 13355 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CGT 21127 | || |||||||| ||||||||| ||||| | ||| ||||| || |||| || Sbjct 13356 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTATC--CGAGCTCTCGA 13413 Query 21128 T-TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||||||||| | || || || || || ||||| ||| Sbjct 13414 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGTTG 13466 Score = 109 bits (120), Expect = 5e-19 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| || ||||||| ||||| ||||| Sbjct 12812 GTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 12871 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | |||||||||||| |||||| || ||| Sbjct 12872 GCGAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTC 12931 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| ||||| | | ||| || | ||| || ||||||||||| || || Sbjct 12932 ACGTTCTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAAGGTC 12991 Query 21159 TTG 21161 ||| Sbjct 12992 TTG 12994 >seq19772 Length=5961 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 1780 CCACCGCGCAGGCGAAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 1839 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||||||||| ||| Sbjct 1840 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 1899 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||||| ||||| | ||| || ||| || ||| Sbjct 1900 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCAGAGGACTCGACC 1959 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || || || || || ||||| Sbjct 1960 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 2006 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || |||||||||||||| ||||| |||||||| || |||| || ||||| ||||| Sbjct 1354 GTTGATTCCTTTTGAATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCA 1413 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | ||| |||||||| |||||| || ||| Sbjct 1414 GCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 1473 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | | ||| ||| | ||||||||||| || || || || Sbjct 1474 ACGTTTTCGATCGTGTCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCCGTCAAGGTC 1533 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 1534 TTGACGAAGATCTGCAT 1550 >seq18924 Length=24070 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| |||||||| || ||||||| ||||| || || Sbjct 17790 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTACCA 17849 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | || |||||||| ||||||||| ||| Sbjct 17850 GCGAAGATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTC 17909 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| ||||| | | ||| ||| | ||||||||||| || || | || Sbjct 17910 ACGTTCTCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTACCCGTGAGGGTC 17969 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 17970 TTGACGAAGATCTGCAT 17986 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| || |||| || ||||| || || Sbjct 18018 GTTGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGCTTACCA 18077 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | |||||||||||| ||||||||| ||| Sbjct 18078 GCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTC 18137 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || || ||| || | || |||||||||||||| | || Sbjct 18138 ACGTTCTCGATCGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTC 18197 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 18198 TTCACGAAGATCTGCAT 18214 >seq23068 Length=17433 Score = 111 bits (122), Expect = 1e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 23809 ACGTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGG 23868 ||||||||||||||||||||||| ||||| || |||| || ||||||| ||| || | Sbjct 17370 ACGTTGCCCAGGTCGCCGACGTGACGCTCGTCGTCGTCAGGGCCGCCGTGCTTCTTGCCG 17311 Query 23869 GTGGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGC 23928 ||| ||||||||| | || ||| | ||| |||||| || |||| || || ||||| Sbjct 17310 TGGGGATTAAAGTGCGCACCGGCGCTCACGCACCCGTTGGTGTTGTCCCCAAACTCGTGG 17251 Query 23929 ACGTGAAAACCGTGCAGCCCG 23949 ||||| || |||||| | ||| Sbjct 17250 ACGTGGAAGCCGTGCTGGCCG 17230 >seq23603 Length=18425 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 28 CCACCGCGCAGGCGAAGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 87 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||||||||| || Sbjct 88 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 147 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||||| ||||| | ||| || ||| || ||| Sbjct 148 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTGTCAGAGGACTCGACC 207 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||| || || | || ||||| || || ||||| Sbjct 208 TCGAGAGTAATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 254 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || || || || ||||||| ||||| ||||| Sbjct 286 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCG 345 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | || |||||||| ||||||||| ||| Sbjct 346 GCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTC 405 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || ||| || ||| || | ||| |||||||| || || | || Sbjct 406 ACGTTCTCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTC 465 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 466 TTCACGAAGATCTGCAT 482 >seq23925 Length=43003 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 23801 CAGAGCGCACGTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTC 23860 ||| | | ||||||||||||||||||||||| || || || |||| ||| ||||||| Sbjct 10119 CAGCGAGGACGTTGCCCAGGTCGCCGACGTGACGTTCGTCGTCGTCAGGCCCGCCGTGCT 10178 Query 23861 TCTGGCGGGTGGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGA 23920 ||| || | || || |||||| | || ||| | ||| || ||| || |||| || | Sbjct 10179 TCTTGCCGTGAGGATTGAAGTGCGCACCGGCGCTCACGCACCCATTGGTGTTGTCCCCAA 10238 Query 23921 ATTCGTGCACGTGAAAACCGTGC 23943 | ||||| ||||| || |||||| Sbjct 10239 ACTCGTGGACGTGGAAGCCGTGC 10261 >seq22901 Length=26441 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | ||||| ||||| ||||||||||| || || Sbjct 2980 CCTCCGCGCAGGCGTAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTATACTCGGCG 2921 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||||||||||||||| ||| | || | | |||||| || || Sbjct 2920 AGCGTACGGCCGTCCTCCAGCTGTTTGCCAGCAAAGATCAAGCGCTGCTGATCGGGAGGA 2861 Query 21069 ACGCCTTCCTTGTC 21082 | ||||||||||| Sbjct 2860 ATTCCTTCCTTGTC 2847 >seq19654 Length=45035 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/204 (69%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGG---CGTCCTCCAGCTGTTTG 21035 ||||||||| || ||||| |||| ||||| || | |||| || ||||| ||| Sbjct 1884 GTGGACTCCGCCTGGATGTTGCAGTCAGCCAGCGTGCAGCTGCCGTCATCGAGCTGCTTG 1943 Query 21036 CCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGT 21095 || || | || || | |||||||| ||| | || |||||||| |||||| || Sbjct 1944 CCTTCAAAGATGAGGCGCTGCTGGTTAGAGGGAATACCCTCCTTGTCCTGGATCTTCTGC 2003 Query 21096 TTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAAC 21155 ||||| | ||| ||||| | | ||| ||| | ||| |||||||||||||| | Sbjct 2004 TTCACGTTCTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATGGTCTTGCCGGTAAGG 2063 Query 21156 GTTTTGACAAATATTTGCATTTTG 21179 || || || || || ||||| ||| Sbjct 2064 GTCTTCACGAAGATCTGCATCTTG 2087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422135184848168