Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq22211 84.2 2e-11 >seq22211 Length=15201 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || ||||| || || ||||| |||||||| ||| || | | |||| || | || Sbjct 4405 TGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGC 4346 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| ||| | || | || || |||||| ||||| || || ||||| ||| || Sbjct 4345 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTC 4286 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || ||||||||||| || || || | |||||||| ||||| ||| Sbjct 4285 TGCTTCACGTTCTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTC 4226 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 | ||| || || || || |||||| Sbjct 4225 AAAGTCTTGACGAAGATCTGCATA 4202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362072830006218