Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq19772 107 2e-18 seq22211 104 2e-17 seq24030 100 2e-16 seq22955 98.7 8e-16 seq23826 96.9 3e-15 seq23480 96.9 3e-15 seq23068 93.3 3e-14 seq18924 89.7 4e-13 seq23491 84.2 2e-11 seq23154 84.2 2e-11 seq23603 82.4 6e-11 >seq19772 Length=5961 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | |||||| | || || || || |||||||| ||||||||||||||| Sbjct 1324 CCACCACGCAGACGCAGTACGAGGTGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGCC 1383 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| || | || ||||| || | || || ||||| ||||| ||| Sbjct 1384 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 1443 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | ||||||||| | | | ||||||| | ||| | Sbjct 1444 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCGCTCGACTCGACT 1503 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || || |||| || ||||| || |||||||| Sbjct 1504 TCGAGAGTAATGGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 1550 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 1576 TGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGC 1635 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| || | ||||| ||||| || | | Sbjct 1636 TTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTC 1695 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| ||| | |||||||| || ||||| Sbjct 1696 TGCTTCACGTTCTCGATCGTATCGCTCGACTCGACTTCGAGCGTGATGGTCTTACCGGTG 1755 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 1756 AGGGTCTTGACGAAGATCTGCAT 1778 >seq22211 Length=15201 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || ||||||||||| ||||||||||||||| Sbjct 4429 CCTCCACGCAGGCGGAGCACGAGGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGCC 4370 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | || ||||| || | || || ||||| ||||| ||| Sbjct 4369 AGCGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 4310 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||||||||| | | | || |||| | ||| | Sbjct 4309 ATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACT 4250 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || ||||||| || ||||| || |||||||| Sbjct 4249 TCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 4203 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||||||| Sbjct 4201 CCTCCACGCAGACGAAGCACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 4142 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || || | || || ||||| ||||| || Sbjct 4141 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 4082 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG- 16886 | |||||| ||||| || | |||||||| | | | |||| ||| |||| || Sbjct 4081 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTTTCGATGGTGT--CCGAGCTCTCGA 4024 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || ||||| || || || || || |||||||| Sbjct 4023 CCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 3975 >seq24030 Length=66970 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| ||||||||||| |||| ||| | ||||||| | || Sbjct 65988 TGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCAAGCTGC 66047 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | ||||| ||||| ||||| || | ||||| ||||| || | | Sbjct 66048 TTGCCAGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTC 66107 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| ||| | |||||| || || || ||| Sbjct 66108 TGCTTCACGTTCTCGATCGTATCGCTAGACTCGACTTCGAGGGTGATCGTCTTGCCAGTC 66167 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || |||||||| Sbjct 66168 AAGGTCTTGACGAAGATCTGCAT 66190 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||| || Sbjct 66192 CCTCCGCGCAGGCGAAGCACGAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCG 66251 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | || ||||| || | || || ||||| ||||| || Sbjct 66252 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 66311 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | ||||||||| | | | ||||| || ||| Sbjct 66312 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCAGAGGACTCGACC 66371 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || || ||||| || |||||||| Sbjct 66372 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 66418 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| ||||||| | || Sbjct 66444 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCAAGCTGC 66503 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| || | ||||| ||||| || | | Sbjct 66504 TTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTC 66563 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| || | ||| ||||| || || ||| Sbjct 66564 TGCTTCACGTTCTCGATCGTATCGCTAGACTCGACCTCGAGGGTAATGGTCTTGCCAGTC 66623 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || |||||||| Sbjct 66624 AAGGTCTTGACGAAGATCTGCAT 66646 >seq22955 Length=9686 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||||||| Sbjct 7926 CCTCCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 7985 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || || | || || ||||| ||||| || Sbjct 7986 AGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCGGGGGGA 8045 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | ||||||||| | | | || |||| | ||| | Sbjct 8046 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGGTATCGCTCGACTCGACT 8105 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || || || || ||||| || |||||||| Sbjct 8106 TCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 8152 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || ||||||||||| |||||||||||||| Sbjct 8154 CCTCCACGCAGGCGGAGCACGAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGCA 8213 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | || || || || | ||||| ||||| ||||| || Sbjct 8214 AGCGTACGACCGTCCTCAAGCTGCTTACCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGA 8273 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | ||||||||| | | | || |||| | ||| | Sbjct 8274 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACT 8333 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || ||||||| || ||||| || |||||||| Sbjct 8334 TCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 8380 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | || | ||||||| | || Sbjct 8406 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGC 8465 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| || | |||||| ||||| || | Sbjct 8466 TTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTT 8525 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910 |||||||| | | | |||| ||| |||| || || | ||||||||| || |||| Sbjct 8526 TGCTTCACGTTTTCGATCGTGT--CCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGG 8583 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 | || || || || || |||||||| |||| Sbjct 8584 TGAGGGTCTTCACGAAGATCTGCATGTTGT 8613 >seq23826 Length=10614 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| ||||||||||||||||| | ||| | ||||||| | || Sbjct 8951 TGGAGAGTGGACTCCTTCTGTATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCGAGCTGC 8892 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || ||||| | || || ||||| ||||| || | ||||| ||||| || | Sbjct 8891 TTACCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTT 8832 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| || ||| || | |||||| || || ||||| Sbjct 8831 TGCTTCACGTTCTCAATAGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTG 8772 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 8771 AGGGTCTTCACGAAGATCTGCAT 8749 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || |||||||||||||| Sbjct 8747 CCTCCACGAAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8688 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || ||||| | || || ||||| ||||| || Sbjct 8687 AGGGTACGGCCGTCCTCAAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 8628 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | ||||||||| | | | || |||| | ||| | Sbjct 8627 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACT 8568 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || ||||| || || |||| || ||||| || |||||||| Sbjct 8567 TCGAGAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 8521 >seq23480 Length=26370 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | || | ||||||| | || Sbjct 12578 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCAAGCTGC 12637 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | ||||| ||||| ||||| || | |||||| ||||| || | | Sbjct 12638 TTACCGGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTC 12697 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| ||| | ||||||||| || || || Sbjct 12698 TGCTTCACATTCTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATGGTCTTACCCGTG 12757 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 12758 AGGGTCTTGACGAAGATCTGCAT 12780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || |||||||||||||| Sbjct 13236 CCTCCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 13295 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | || || ||||| | ||||| ||||| || || || Sbjct 13296 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGCTGCTGATCGGGGGGA 13355 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG- 16886 | ||||| ||||| || | |||||||| | | | || | ||| |||| || Sbjct 13356 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTAT--CCGAGCTCTCGA 13413 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 || | ||||||||| || ||||| || || || || || |||||||| |||| Sbjct 13414 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGTTGT 13467 >seq23068 Length=17433 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/157 (75%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 19388 GCGCGGCTTGCACGGTTTTCATGTGCACGAGTTTGGTGATACCAGCAACGGGTGCACGTC 19447 || |||| |||||| || || || ||||||||||| || | || |||||||||| | Sbjct 17227 GCCCGGCCAGCACGGCTTCCACGTCCACGAGTTTGGGGACAACACCAACGGGTGCGTGAG 17286 Query 19448 AGCAGGCGAGCATTTTAA-CCCCAC-GCATCAACAGCATGGTGCCCCCGACGCCGCAGAG 19505 || || | ||| ||||| |||||| ||| | |||| || | ||| |||| || ||| Sbjct 17287 CGCCGGTGCGCACTTTAATCCCCACGGCA--AGAAGCACGGCGGCCCTGACGACGACGAG 17344 Query 19506 CGGCACGTTGGTGACCTGGGCAACGTGCGCTCCGCCG 19542 || ||||| || |||||||||||||| | | ||| || Sbjct 17345 CGTCACGTCGGCGACCTGGGCAACGTCCTCGCCGACG 17381 >seq18924 Length=24070 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| | ||||||| | || Sbjct 17556 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCAAGCTGC 17615 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| ||| | ||||| ||||| || | | Sbjct 17616 TTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 17675 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGG 16910 |||||||| | | | |||| ||| |||| || ||| | |||||| || || || | Sbjct 17676 TGCTTCACGTTCTCGATCGTGT--CCGAGCTCTCGACTTCGAGGGTGATCGTCTTGCCAG 17733 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || ||||| || |||||||| Sbjct 17734 TCAAAGTCTTGACGAAGATCTGCAT 17758 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||||| ||| | ||||||| | || Sbjct 17784 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGC 17843 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| || | ||||| ||||| || | Sbjct 17844 TTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTT 17903 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | || |||| | ||| ||| | || ||||| || || || Sbjct 17904 TGCTTCACGTTCTCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTACCCGTG 17963 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 17964 AGGGTCTTGACGAAGATCTGCAT 17986 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| | |||| || | || Sbjct 18012 TGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGC 18071 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| ||| | ||| || ||||| || | Sbjct 18072 TTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTT 18131 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | |||||| || ||| || | |||||||| || ||||| Sbjct 18132 TGCTTCACGTTCTCGATCGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTG 18191 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 18192 AGGGTCTTCACGAAGATCTGCAT 18214 >seq23491 Length=3604 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 16741 GGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGC 16800 ||||||||| ||||||||||||| ||| | || ||| |||| || | || || || || Sbjct 3094 GGACTCCTTCTGTATGTTGTAGTGGGCGAGAGTCTTGTCGTCATCGAGCTGCTTCCCGGC 3035 Query 16801 ATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCA 16859 | || || ||||| | ||| || |||||||| || ||| ||| ||| |||||| | Sbjct 3034 GCAGATGAGGCGCTGGAGTTCCTTCGGGACGCCCTCCTTATCGTGCACTTT-CTGCTTGA 2976 Query 16860 CCTGGCCCACAGTGTCGCCGGGCTC-CGTT-TCCACGGTGATGGTTTTTCCGGTCAGCGT 16917 | |||| || ||| ||| |||| || |||| |||||||| || | || | Sbjct 2975 C--GGCCTCCACTGTGTCCGTGCTCTCGACATCCAGAGTGATGGTGCGCCCCGAAAGGGC 2918 Query 16918 TTTGACAAAAATCTGCATTTT 16938 ||||| || ||||||||||| Sbjct 2917 CTTGACGAAGATCTGCATTTT 2897 >seq23154 Length=3606 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 16741 GGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGC 16800 ||||||||| ||||||||||||| ||| | || ||| |||| || | || || || || Sbjct 511 GGACTCCTTCTGTATGTTGTAGTGGGCGAGAGTCTTGTCGTCATCGAGCTGCTTCCCGGC 570 Query 16801 ATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG-GCAATTTGCTGCTTCA 16859 | || || ||||| | ||| || |||||||| || ||| ||| ||| |||||| | Sbjct 571 GCAGATGAGGCGCTGGAGTTCCTTCGGGACGCCCTCCTTATCGTGCACTTT-CTGCTTGA 629 Query 16860 CCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGGTTTTTCCGGTCAGCGT 16917 | |||| || ||| ||| |||| || |||| |||||||| || | || | Sbjct 630 C--GGCCTCCACTGTGTCCGTGCTCTCGACATCCAGAGTGATGGTGCGCCCCGAAAGGGC 687 Query 16918 TTTGACAAAAATCTGCATTTT 16938 ||||| || ||||||||||| Sbjct 688 CTTGACGAAGATCTGCATTTT 708 >seq23603 Length=18425 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | || | ||||||| | || Sbjct 280 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCAAGCTGC 339 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||| ||||| ||| | ||||| ||||| || | Sbjct 340 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTT 399 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||||| | | | ||||| || ||| || | ||||||||| || || || Sbjct 400 TGCTTCACGTTCTCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTG 459 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 460 AGGGTCTTCACGAAGATCTGCAT 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404969027933020