Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq22211 132 4e-26 seq22955 123 2e-23 seq23480 118 9e-22 seq23826 114 1e-20 seq23003 114 1e-20 seq19361 114 1e-20 seq24030 113 4e-20 seq19772 107 2e-18 seq23603 105 6e-18 seq22901 104 2e-17 seq18924 104 2e-17 seq18730 95.1 1e-14 seq11646 95.1 1e-14 seq21554 86.0 5e-12 >seq22211 Length=15201 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| |||||||| || | ||||| ||||| || | | | Sbjct 4203 ATGCAGATCTTCGTCAAGACTTTGACCGGTAAGACCATTACTCTCGAAGTCGAGTCGAGC 4262 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || ||||| ||||||||||||||||| ||||| || Sbjct 4263 GATACCATCGAGAACGTGAAGCAGAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCAG 4322 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| || || | |||| |||||| Sbjct 4323 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACGCTGGCCGACTACAAC 4382 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || ||| | || | || | || |||| |||||| Sbjct 4383 ATTCAAAAGGAGTCAACCCTCCACCTCGTGCTCCGCCTGCGTGGAGGT 4430 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | |||||||| ||| |||| || || || || | | | Sbjct 4431 ATGCAGATCTTCGTGAAGACCCTTACCGGTAAGACGATCACCCTCGAGGTCGAGAGCTCG 4490 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || ||||| || || ||||||||||||||||| ||||| || Sbjct 4491 GATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 4550 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| || || | |||| |||||| Sbjct 4551 CAGCGTCTTATCTTCGCGGGTAAGCAGCTTGAGGACGGTCGTACGCTGGCCGACTACAAC 4610 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 4611 ATCCAGAAGGAGTCGACC 4628 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | ||||| || ||| |||| || || || || | | | Sbjct 3975 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGAGCTCG 4034 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || ||||| || || ||||||||||| ||||| ||||| || Sbjct 4035 GACACCATCGAAAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 4094 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | ||||| ||||||| | |||| |||||| Sbjct 4095 CAGCGCCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTGGCCGACTACAAC 4154 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | || | || |||| |||||| Sbjct 4155 ATCCAGAAGGAGTCAACTCTCCACCTCGTGCTTCGTCTGCGTGGAGGT 4202 >seq22955 Length=9686 Score = 123 bits (136), Expect = 2e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 22234 AAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGAT 22293 || || || ||||| || ||| |||| ||||| || || | | ||||||| | || | Sbjct 7874 AAGACCTTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGAGCGATACCATCGAGAAC 7815 Query 22294 ATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTT 22353 | |||||||| || || ||||||||||||||||| || || || || |||||||| || Sbjct 7814 GTTAAACAAAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAGCAGCGTCTTATCTTC 7755 Query 22354 GCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCC 22413 |||||||| ||| | ||||| ||| ||| | |||| |||||||| || || || || Sbjct 7754 GCCGGCAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAACATCCAGAAGGAGTCG 7695 Query 22414 ACC 22416 ||| Sbjct 7694 ACC 7692 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| |||||||| || | ||||| ||||| || | | | Sbjct 8380 ATGCAGATCTTCGTCAAGACTTTGACCGGTAAGACCATTACTCTCGAAGTCGAGTCGAGC 8321 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || ||||||||||||||||| ||||| || Sbjct 8320 GATACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 8261 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || ||||| || ||| | ||||| || || | |||| |||||| Sbjct 8260 CAGCGCCTTATCTTCGCCGGTAAGCAGCTTGAGGACGGTCGTACGCTTGCCGACTACAAC 8201 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || || ||| | || | || | || |||| |||||| Sbjct 8200 ATCCAAAAGGAGTCAACCCTCCACCTCGTGCTCCGCCTGCGTGGAGGT 8153 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| ||| |||| || ||||| || | | | Sbjct 8152 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTCGAAGTCGAGTCGAGC 8093 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || || || || || ||||||||||| ||||| ||||| || Sbjct 8092 GATACCATCGAGAATGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 8033 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||| ||| | |||| |||||| Sbjct 8032 CAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACCCTGGCCGACTACAAC 7973 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || ||| | || | || | || |||| ||||| Sbjct 7972 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTTCGCCTGCGTGGAGG 7926 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | ||||| || || |||| || || || || | | Sbjct 8611 AACATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGC 8552 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || | | || ||||| || || ||||||||||| ||||| ||||| Sbjct 8551 TCGGACACGATCGAAAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCCGAC 8492 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || || ||||| ||| | ||||| |||||| | |||| ||| Sbjct 8491 CAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACTCTTGCCGACTAC 8432 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || || || || Sbjct 8431 AACATCCAGAAGGAGTCGAC 8412 >seq23480 Length=26370 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| || |||| || ||||| || | | | Sbjct 12780 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAAGTCGAGTCGAGC 12721 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || || || || || ||||||||||| ||||| ||||| || Sbjct 12720 GATACCATCGAGAATGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 12661 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || ||||| || ||| | ||||| |||||| || |||| |||||| Sbjct 12660 CAGCGTCTTATCTTCGCCGGTAAGCAGCTTGAGGACGGCCGCACTCTCGCCGACTACAAC 12601 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 12600 ATCCAGAAGGAGTCGACC 12583 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | ||||| || || |||| || || || || | | Sbjct 13465 AACATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGC 13406 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | || | | || ||||| || || ||||||||||||||||| |||||| Sbjct 13405 TCGGATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCCGAT 13346 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || |||||||| || || || || ||| | ||||| |||||| | |||| ||| Sbjct 13345 CAGCAGCGTCTTATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGCACTCTTGCCGACTAC 13286 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || || | || | || | || |||| |||||| Sbjct 13285 AACATCCAGAAGGAGTCGACTCTCCACCTCGTGCTTCGCCTGCGTGGAGGT 13235 >seq23826 Length=10614 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | ||||| || ||| |||| || || || || || Sbjct 8290 AATATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCC 8349 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | || | | || ||||| || || ||||||||||||||||| |||||| Sbjct 8350 TCGGACACCATCGAAAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCCGAT 8409 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || |||||||| || || || || ||| | ||||| |||||| | |||| ||| Sbjct 8410 CAGCAGCGTCTTATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGCACTCTTGCCGACTAC 8469 Query 22396 AACATTCAAAAAGAATCCACC 22416 ||||| || || || || ||| Sbjct 8470 AACATCCAGAAGGAGTCGACC 8490 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| || ||||| || | ||||| ||||| || | | | Sbjct 8521 ATGCAGATCTTCGTCAAGACTTTGACTGGTAAGACCATTACTCTCGAAGTCGAGTCGAGC 8580 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || ||||||||||| ||||| ||||| || Sbjct 8581 GATACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 8640 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | ||||| ||| ||| | |||| |||||| Sbjct 8641 CAGCGCCTCATCTTCGCGGGTAAGCAGCTTGAGGACGGCCGTACCCTTGCCGACTACAAC 8700 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 8701 ATCCAGAAGGAGTCGACC 8718 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| |||| || || || || || | Sbjct 8749 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 8808 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || || ||||||||||||||||| ||||| || Sbjct 8809 GACACTATTGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 8868 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | ||||| ||| ||| | |||| |||||| Sbjct 8869 CAGCGCCTCATCTTCGCGGGTAAGCAGCTCGAGGACGGCCGTACCCTTGCCGACTACAAC 8928 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 8929 ATACAGAAGGAGTCCAC 8945 >seq23003 Length=12893 Score = 114 bits (126), Expect = 1e-20 Identities = 175/245 (71%), Gaps = 11/245 (4%) Strand=Plus/Minus Query 130012 GCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCT 130071 || ||||| || ||||| |||| ||||| ||||||||| | || || | ||| || || Sbjct 1188 GCCTCGACGCGCTTCATGAACAGGTCGGGCACCCACAGGCCATAGAAGAGATCACGAGCA 1129 Query 130072 T--TTCTA-TCCTCGGCACCCATGTTACGT-TTCAGTTCAAGGAAATCGTAAATGTCGGC 130127 |||| |||| | ||||| | | | || || |||||||||||| | |||||||| Sbjct 1128 CGGTTCTCCTCCTTG----CCATGGTTCTTCTTGAGCTCAAGGAAATCGAAGATGTCGGC 1073 Query 130128 GTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAAC 130184 ||||||||| || | ||| || || | || ||||| || ||| || || || ||||| Sbjct 1072 GTGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTGCGCTTGCCACCGCCCTGATCAAC 1013 Query 130185 GTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTT 130244 || ||| ||| || |||||| || || | ||| | | |||||||| || ||||| Sbjct 1012 GTAGCGAGCGGTATCGTTGTAAACACGGAGCATGGGGATGAGTCCGTTGGATGTTCCGTT 953 Query 130245 TGTGC 130249 |||| Sbjct 952 GGTGC 948 >seq19361 Length=29087 Score = 114 bits (126), Expect = 1e-20 Identities = 265/390 (68%), Gaps = 17/390 (4%) Strand=Plus/Plus Query 130012 GCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCG--CG 130069 || || || || ||||| |||| || || ||||||||| |||| || | ||| || || Sbjct 14485 GCCTCAACGCGCTTCATGAACAGGTCCGGCACCCACAGGCCGTAGAAGAGATCACGAGCG 14544 Query 130070 CTTTTCTA-TCCTCGGCACCCATGTTACGT-TTCAGTTCAAGGAAATCGTAAATGTCGGC 130127 | |||| |||| | ||||| | | | || || |||||||||||| | || ||||| Sbjct 14545 CGGTTCTCCTCCTTG----CCATGGTTCTTCTTGAGCTCAAGGAAATCGAAGATATCGGC 14600 Query 130128 GTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAAC 130184 ||||||||| || | ||| || || | || ||||| || ||| || || || ||||| Sbjct 14601 GTGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTACGCTTGCCACCGCCCTGATCAAC 14660 Query 130185 GTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTT 130244 || ||| ||| || ||||||||| || | ||| | | ||| || | ||| ||||| Sbjct 14661 GTAGCGAGCGGTATCGTTGTAGACACGAAGCATGGGGATGAGTCCATTCGACGTTCCGTT 14720 Query 130245 TGTGCTCTCAATGAA--ACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCG 130302 |||| ||| | | | | | ||| || | | |||||| | || ||||| Sbjct 14721 GGTGCCGCGGATGTACGAGTTCGA--AGCGCGGATGCGGTGAACGGCAACTCCAATGCCA 14778 Query 130303 CCGCCAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACT 130361 ||| || | || || || | ||||| | || | ||||| || || ||||| |||| Sbjct 14779 CCGGCAGACTTGGAGATGAGAGCGCACT-GCTTGAGCGTGTCGTAGATGCCCTCGATGGA 14837 Query 130362 GTCTTCTTTAATGTTTAGGAGGAAACACGA 130391 ||| || || || | || ||||| ||||| Sbjct 14838 GTCCTCCTTCATCGTGAGCAGGAAGCACGA 14867 >seq24030 Length=66970 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || ||| |||| || ||||| || | | | Sbjct 66190 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACGATCACCCTCGAAGTCGAGTCTAGC 66131 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || || || || || ||||||||||||||||| || || || Sbjct 66130 GATACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 66071 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| | ||||| ||||||| | | || |||||| Sbjct 66070 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGGCTGACTACAAC 66011 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| || || || Sbjct 66010 ATTCAAAAGGAGTCTAC 65994 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || || | Sbjct 66418 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 66359 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || ||||||||||||||||| || || || Sbjct 66358 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 66299 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| |||||| || | || |||||| Sbjct 66298 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCTGACTACAAC 66239 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | || | || | || ||||||||||| Sbjct 66238 ATCCAGAAGGAGTCAACCCTCCACCTCGTGCTTCGCCTGCGCGGAGGT 66191 >seq19772 Length=5961 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || ||||| || | ||||| ||||| || | | | Sbjct 1550 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAGACCATTACTCTCGAAGTCGAGTCGAGC 1491 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || ||||||||||| || || ||||| || Sbjct 1490 GACACGATCGAAAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 1431 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | || || ||||||| | |||| |||||| Sbjct 1430 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAAGACGGCCGCACCCTGGCCGACTACAAC 1371 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||||| ||| | || | || |||| |||| || || Sbjct 1370 ATTCAAAAGGAATCAACCCTCCACCTCGTACTGCGTCTGCGTGGTGG 1324 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | |||||||| || |||| || ||||| || | | | Sbjct 1778 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAGACCATCACGCTCGAAGTCGAGTCGAGC 1719 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || || || || || ||||||||||||||||| || || || Sbjct 1718 GATACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 1659 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | ||||| ||| ||| | |||| |||||| Sbjct 1658 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGGCCGACTACAAC 1599 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 1598 ATCCAGAAGGAGTCAACC 1581 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| ||||| || || || | Sbjct 2006 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 1947 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || || ||||||||||||||||| || || || Sbjct 1946 GACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 1887 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||||| || | || |||||| Sbjct 1886 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCGCTGACTACAAC 1827 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | || | || ||||||| ||| Sbjct 1826 ATCCAGAAGGAGTCTACTCTCCACCTTGTGCTTCGCCTGCGCGGTGGT 1779 >seq23603 Length=18425 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| || |||| || || || || || | Sbjct 482 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCT 423 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || || ||||||||||||||||| ||||| || Sbjct 422 GACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 363 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| |||||| || | || |||||| Sbjct 362 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCTGACTACAAC 303 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 302 ATCCAGAAGGAGTCCACC 285 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| || | ||||| || || || || | Sbjct 254 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACCATTACTCTCGAGGTCGAGTCCTCT 195 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || || ||||||||||||||||| ||||| || Sbjct 194 GACACGATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 135 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | ||||| ||||||| || |||| |||||| Sbjct 134 CAGCGCCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCGCCGACTACAAC 75 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | || | || ||||||| ||| Sbjct 74 ATCCAGAAGGAGTCTACTCTCCACCTCGTGCTTCGCCTGCGCGGTGGT 27 >seq22901 Length=26441 Score = 104 bits (114), Expect = 2e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||||||| | || | | |||| || | || |||||||| || ||||| ||||||| Sbjct 2812 CCGATACCATTGAAGCTGTCAAGGCTAAGCTGCAGGACAAGGAAGGAATTCCTCCCGATC 2871 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || | || ||||| ||||||||| | ||||| ||| || || |||| || | Sbjct 2872 AGCAGCGCTTGATCTTTGCTGGCAAACAGCTGGAGGACGGCCGTACGCTCGCCGAGTATA 2931 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||| || ||||||||| | || || || | || ||||||||||| Sbjct 2932 ACATTCAGAAGGAATCCACCCTTCACTTGGTGCTACGCCTGCGCGGAGGT 2981 >seq18924 Length=24070 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| || || || ||| |||| || ||||| || | | | Sbjct 17758 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACGATCACCCTCGAAGTCGAGAGCTCG 17699 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || || ||||||||||||||||| ||||| || Sbjct 17698 GACACGATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 17639 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | ||||| ||| ||| || |||| |||||| Sbjct 17638 CAGCGCCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGCCGTACCCTCGCCGACTACAAC 17579 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 17578 ATCCAGAAGGAGTCTAC 17562 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| || | || || ||||| || | | | Sbjct 17986 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACCATTACGCTCGAAGTCGAGTCGAGC 17927 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || ||||| || || ||||||||||||||||| || || || Sbjct 17926 GATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 17867 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | ||||| ||| ||| | |||| |||||| Sbjct 17866 CAGCGCCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGCCGTACCCTGGCCGACTACAAC 17807 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 17806 ATCCAGAAGGAGTCGACC 17789 >seq18730 Length=7279 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || | || || ||||| || | | | Sbjct 124 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACGCTCGAAGTCGAGTCGAGC 183 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || ||||| || || ||||||||||||||||| || || || Sbjct 184 GATACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 243 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | ||||| ||||||| || | || |||||| Sbjct 244 CAGCGCCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCGCTGACTACAAC 303 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 304 ATCCAGAAGGAGTCGAC 320 >seq11646 Length=142 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356 || ||||| || || ||||||||||||||||| ||||| || || |||||||| || || Sbjct 126 AAGCAAAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAGCAGCGTCTTATCTTCGCG 67 Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 || || ||| | ||||| ||||||| | |||| |||||||| || || || || ||| Sbjct 66 GGTAAGCAGCTTGAGGACGGCCGCACCCTTGCCGACTACAACATCCAGAAGGAGTCGACC 7 >seq21554 Length=44846 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || | || || | || || || | |||||| | || ||| | | Sbjct 20248 GATGCAGATCTTCATCAAGACCCTCACTGGCAAGAGCGTCACTGTGGATGTGAGTCCTTC 20307 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||||| | || | | | || || | ||||||||||| || ||||| |||||||| Sbjct 20308 CGATACCATTGAAGCTGTAAAGGCTAAGCTGCAAGACAAGGAAGGAATTCCCCCCGATCA 20367 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || || | || || || ||||| ||| | |||||| ||| || || ||| || || Sbjct 20368 GCAGCGCTTGATCTTCGCTGGCAAGCAGCTGGAGGATAGCCGTACGCTCGGCGAGTATAA 20427 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGG 22442 |||||| || || |||||| | || || || | || ||||||| Sbjct 20428 CATTCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTGCGCGG 20472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419604728247370