Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq19361 461 1e-124 seq23003 457 2e-123 seq23741 306 7e-78 >seq19361 Length=29087 Score = 461 bits (510), Expect = 1e-124 Identities = 1254/1907 (66%), Gaps = 71/1907 (4%) Strand=Plus/Plus Query 243776 AGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGC 243835 ||||||||||||||||||||||| || || ||| |||| || |||||| | || ||| Sbjct 13303 AGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTGAGC 13362 Query 243836 TTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGG 243895 || || || | ||| | || ||| |||||| |||||||||||| Sbjct 13363 TTG----------GCGAAGGAAGG--CTCTCCCATGTAGATGTTGAGCGACTGGCTCTGG 13410 Query 243896 TCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATAC 243955 |||| | | | | || || ||||||||| ||||| | | ||| | ||||| || Sbjct 13411 TCGATGTATGCAGAGCGGTCGGCGGCCATGTCGATGACGACGCGCTGCGGAATCTCCCAC 13470 Query 243956 GCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCC 244015 | |||||||| | |||||||| || |||| | | |||||||||||||| ||||| Sbjct 13471 ACAGTCTTGTACAGCTTCTTGAGGTCATCAGGGATCTCGTCGATGTTCTGCACGGAGCCG 13530 Query 244016 TTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCC 244075 |||||| | | ||| | | | | | | ||||| ||| ||||||| | Sbjct 13531 TTGTGGGCCACGAGTTTGTTCTTAAGGGCGGCCGACCACAAGCCT---CGCTCCATCAGG 13587 Query 244076 TCG---ACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAG 244132 ||| | |||||| ||| || || || || |||| || | ||| || |||| Sbjct 13588 TCGCGGAGGAGGTGCTCGTTGACGACGGTGAAGTCGCCCGCAAGAATGCGACGTGTGTAG 13647 Query 244133 AGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCA 244192 | |||| | || |||||||| || ||| ||||||| || ||||| | ||| || Sbjct 13648 ATGTTGGAGGTGTACGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGAGAGGTGGATGCT 13707 Query 244193 GTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTG 244252 || |||||||| | ||| || || |||||| | ||||||| |||| | | | Sbjct 13708 GTAGGCATGGGTGCCACGAGGAGGGAGTTCCTGAGGCCGTGCTGAGCGATGTTGGCACGG 13767 Query 244253 AGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAAC 244312 || |||||||||| || ||||| || | | |||||| | ||| | Sbjct 13768 AGGGTAGCCCAGTCCCACCTGTCCGAGGGGG---------TAATGCCCCAGAGGTCGGGC 13818 Query 244313 TGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG 244372 || ||| |||| | | || |||| |||| || ||||| | ||| | || | Sbjct 13819 TGGAGCTTGCCCTCGGAAGCTGGCGAGCCCGCGTATGTAGGGTAAGTACCCTGCTCCTTG 13878 Query 244373 GCCAGCTTAC-AGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTG-T 244430 |||| || | || || ||| || ||||||||||||||||||||||| | | | | Sbjct 13879 GCCATCTCATTAGAAGCAGT-GAGTGCAGCGTAGTAGATGGTCTCGAAGAT-AGCGCGAT 13936 Query 244431 TCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCA 244490 | | |||||||||| || | ||| || ||| | ||||||||||||||| | Sbjct 13937 TGAGCTCGCGGGCCTCCTGGCTCTCCCATGGGCAGCGCATGAGCATGAAGACGTCGGCAA 13996 Query 244491 GTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCA 244550 | ||||| || || | ||||| || | ||| ||| |||| ||| ||| || | Sbjct 13997 GACCCTGAACACCAAGACCGATCGGGCGGTGACGCATGTTCGAGTTGCGGGCCTCAATGA 14056 Query 244551 CGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGT 244610 | || || ||||| |||||||||||||||||||||||| |||| | ||| |||| Sbjct 14057 CTGGATAGTAGTTGATGTCGATCACCTTGTTGAGGTTGCGCGTGACGACCTTGACCACGT 14116 Query 244611 CGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACT 244670 || ||| || ||| ||| | | | | ||| | || | | Sbjct 14117 CGAAAAGCTTCTTGTGATCGAACTGGCCG------TTGACGACGTACTTCGGAAGA---- 14166 Query 244671 CGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGA 244730 | | ||||||| |||||||| || || ||||| || | ||| |||| | Sbjct 14167 ----GCGAGCGACGCG----AGGTTGCACACTGCGACCTCATCAGGAGACGTGAACTGAA 14218 Query 244731 CAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGG 244790 | ||| ||||| | ||| | ||| ||||||||| |||||||| || || ||||||| Sbjct 14219 TGACCTCCGTGCACAAGTTCGAGGACTGGATGGTGCCGAGGTGCTGCTGGTTCGACTTGG 14278 Query 244791 CGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA 244850 | ||||| | ||||||||| || ||| | ||| |||||||||| ||| | |||| | Sbjct 14279 CATTGCACGAGTCCTTGTAAAGGATGTAAGGCGTGCCGGTCTCGATCTGTGATTCGAGAA 14338 Query 244851 CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGC 244910 | | ||| || ||| |||||||| | |||||| ||||| |||||||| Sbjct 14339 TGGAGAACCACAGCTCCTGGGCCTTGACGACGCGGCGAGCGCGTCCCTCATTCTCGTAGC 14398 Query 244911 GGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCG 244970 | |||| | |||||||| |||||| |||| |||||||| | | || | Sbjct 14399 GCACGTACTTCTCTTCGAACTCCTCACCCCAGCACTCGAAGAGGCCGGG-CGCTTCGTTG 14457 Query 244971 GG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 || || | ||| ||| ||||| ||| ||| || | || |||||| ||||| || | | Sbjct 14458 GGACAGAAGAGCGACCAATCGCCTCCGGCCTCAACGCGCTTCATGAACAGGTCCGGCACC 14517 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGC 245089 || ||| | | |||||| || | | | | ||| ||| |||| ||||||| | ||| Sbjct 14518 CACAGGCCGTAGAAGAGATCACGAGCGCGGTTCTCCTCCTTGCCATGGTTCTTCTTGAGC 14577 Query 245090 TCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGC 245149 || | || || |||| ||| ||||||| ||||||| |||| |||| || || Sbjct 14578 TCAAGGAAATCGAAGATATCGGCGTGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTA 14637 Query 245150 CGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGT 245205 |||||| || ||||| || || | |||||| ||||| ||| || || | Sbjct 14638 CGCTTGCCACCGCCCTGATCAACG----TAGCGAGCGGTATCGTTGTAGACACGAAGCAT 14693 Query 245206 AGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAG 245265 || | | || || || ||||||||||| |||||| | | | | | || Sbjct 14694 GGGGATGAGTCCATTCGACGTTCCGTTGGTGCCGCGGATGTACGAGTTCGAAGCGCGGAT 14753 Query 245266 GTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGAT 245325 | | | || | || | || ||||| |||||||||||| ||||| ||||| Sbjct 14754 GCGGTGAACGGCAACTCCAATGCCACCGGCAGACTTGGAGATGAGAGCGCACTGCTTGAG 14813 Query 245326 GGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAG 245385 ||||| |||||||| ||| |||| |||||| ||||||| ||||| || ||||| Sbjct 14814 CGTGTCGTAGATGCCCTCGATGGAGTCCTCCTTCATCGTGAGCAGGAAGCACGACGACAG 14873 Query 245386 CTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT 245445 ||| || || ||| || |||||| ||||| || ||||||| || ||| ||| ||| Sbjct 14874 CTGCGGACGAGGCGTGCCCGCGTTGAAGAGAGTAGGAGTGGCGTGCGTGAAG-AGCTGCT 14932 Query 245446 -CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGG 245504 |||||||| |||| |||| |||| ||| ||||||||| ||| | | || Sbjct 14933 GCGAGAGGAGATCGTATGTCTCCAGCACGGCGGGGATGTTGTCCGTGTGAAGGCCGACGG 14992 Query 245505 CGCACCTCATGAGGGTGTGCTGGGGCGTCT---CGATGGGTCCCTCGGGTCCCTTGAGCA 245561 || ||||||||| ||||||| ||| || ||||| ||| || ||||| | Sbjct 14993 CGACCCTCATGAGCATGTGCTGCGGCCGCTCCACGATGACTCCGTC---AATCTTGAAGA 15049 Query 245562 TGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCC 245621 ||| ||||| ||||| |||||||| ||||||||||||||| |||||| | || | Sbjct 15050 GGTACGAGCGTTCGAGGGTCTTGAAACCAAAGTACGAGTAGTTGAAGTCGCGCTCGTACT 15109 Query 245622 TGACGGCTGCGTCGAGTCTCTCGGCGTGCTTCTGAC--TGACCTCGT 245666 | | || || | ||| |||||||||| |||| |||||||| Sbjct 15110 TAATAGCGGCCTGGAGCACGTCGGCGTGCT--TGACGAAGACCTCGT 15154 >seq23003 Length=12893 Score = 457 bits (506), Expect = 2e-123 Identities = 1251/1906 (66%), Gaps = 69/1906 (4%) Strand=Plus/Minus Query 243776 AGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGC 243835 |||||||||||||| |||||||| || || ||| |||| || |||||| | || ||| Sbjct 2370 AGGTAGTACATGCCAGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTGAGC 2311 Query 243836 TTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGG 243895 || || || | ||||| || ||| |||||||||||||||||| Sbjct 2310 TTG----------GCGAAGGAAGG--CTCGCCCATGTAGATGTTGAGGGACTGGCTCTGA 2263 Query 243896 TCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATAC 243955 |||| | | | | || || || |||||| ||||| | ||| | ||||| || Sbjct 2262 TCGATGTACGCAGAGCGATCGGCAGCCATGTCGATGACTACGCGCTGCGGAATCTCCCAC 2203 Query 243956 GCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCC 244015 | |||||||| | |||||| | ||||||| | | |||||||||||||| ||||| Sbjct 2202 ACAGTCTTGTACAGCTTCTTGAGATCATCGGGGATCTCGTCGATGTTCTGCACTGAGCCG 2143 Query 244016 TTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCC 244075 ||||| ||| ||| | | | | | | ||||| ||| ||||||| | Sbjct 2142 TTGTGAGCGACGAGTTTGTTCTTGAGGGCGGCCGACCACAAGCCT---CGCTCCATCAGG 2086 Query 244076 TCG---ACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAG 244132 ||| | |||||| ||| || || || || || | || | ||| || |||| Sbjct 2085 TCGCGGAGGAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCAAGAATGCGACGTGTGTAG 2026 Query 244133 AGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCA 244192 | ||| | || |||||||| || ||| ||||||| || ||||| | ||| || Sbjct 2025 ATATTGGAGGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGTGAGGTGGATGCC 1966 Query 244193 GTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTG 244252 || |||||||||| ||| || || |||||| | |||||| |||| | | | Sbjct 1965 GTAGGCATGGGCGCCACGAGGAGGGAGTTCCTGAGACCGTGCTGAGCGATGTTGGCACGG 1906 Query 244253 AGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAAC 244312 || |||||||||| || ||||| | | | ||||| | || Sbjct 1905 AGGGTAGCCCAGTCCCACCTGTCCGAGGGAG---------TAACACCCCAGAGATCGGGT 1855 Query 244313 TGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG 244372 || ||| |||| | | || ||| | || || ||||||| || | |||| Sbjct 1854 TGGAGCTTGCCCTCGGAAGCCGGCGAGCCAGCATACGTAGGGTAGGTGCCCTGCTCCTGG 1795 Query 244373 GCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTG-TT 244431 |||| || | | ||| |||||||||||||||||||||||||| | | | || Sbjct 1794 GCCATCTCGTTGGAAGCAGTGAGTGCGGCGTAGTAGATGGTCTCGAAGAT-AGCGCGATT 1736 Query 244432 CATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAG 244491 | |||||||||| || ||||| || ||| | ||| ||||||||||| || Sbjct 1735 GAGCTCGCGGGCCTCCTGGCTCTCCCAGGGGCAGCGCATGAGCATAAAGACGTCGGCAAG 1676 Query 244492 TCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCAC 244551 ||||| || || | ||||| || | ||| ||| |||| ||| ||| || || || Sbjct 1675 ACCCTGAACACCAAGACCGATCGGACGGTGGCGCATGTTCGAGTTGCGGGCCTCAGGGAC 1616 Query 244552 GGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTC 244611 ||||| ||||| ||||||||||||||||||||||||||||| | ||| ||||| Sbjct 1615 TGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTGCGGGTGACTACTTTGACCACGTC 1556 Query 244612 GGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTC 244671 | ||| || ||| ||| || || || || | ||| Sbjct 1555 GTAGAGCTTCTTGTGATCGAACTG----------TC--CGTTGACGA------CGTACTT 1514 Query 244672 GTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGAC 244731 | || |||| || |||||||| || || ||||| || | |||||||| | Sbjct 1513 GGGAAGAGCGAGCGACGCGAGGTTGCACACAGCGACCTCATCAGGAGACGTGTACTGAAT 1454 Query 244732 AATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGC 244791 | ||| ||||| | ||| | ||| ||||||||| |||||||| || || |||||||| Sbjct 1453 GACCTCCGTGCACAAGTTCGAGGACTGGATGGTGCCAAGGTGCTGCTGGTTCGACTTGGC 1394 Query 244792 GTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGAC 244851 ||||| | ||||| ||||| ||| | ||| |||||||||| ||| | |||| | Sbjct 1393 ATTGCACGAATCCTTATAGAGGATGTAAGGCGTGCCGGTCTCGATCTGCGACTCGAGAAT 1334 Query 244852 GCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCG 244911 | | ||| || ||| |||||||| | |||||| ||| || |||||| || Sbjct 1333 GGAGAACCACAGCTCCTGGGCCTTGACGACACGGCGAGCGCGGCCTTCGTTCTCGTAACG 1274 Query 244912 GGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG-CCG 244970 |||| ||||||||||| ||||||| |||| ||||| ||| | || | Sbjct 1273 CACGTACTTCTCCTCGAACTCGTCGCCCCAGCACTCGAAGAGGCC-TGGCGCTTCGTTGG 1215 Query 244971 GGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCC 245030 |||| | ||| ||| ||||| ||| ||| ||| | || |||||| |||||||| | || Sbjct 1214 GGCAGAAGAGCGACCAGTCGCCTCCGGCCTCGACGCGCTTCATGAACAGGTCGGGCACCC 1155 Query 245031 AGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCT 245090 | ||| | | |||||| || | | | | ||| ||| |||| ||||||| | |||| Sbjct 1154 ACAGGCCATAGAAGAGATCACGAGCACGGTTCTCCTCCTTGCCATGGTTCTTCTTGAGCT 1095 Query 245091 CCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCC 245150 | | || || |||| |||| ||||||| ||||||| |||| |||| || || | Sbjct 1094 CAAGGAAATCGAAGATGTCGGCGTGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTGC 1035 Query 245151 GCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTA 245206 ||||| || ||||| | || | | |||||| ||||| | | || || | Sbjct 1034 GCTTGCCACCGCCCTG----ATCAACGTAGCGAGCGGTATCGTTGTAAACACGGAGCATG 979 Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266 || | | ||||| || ||||||||||| |||||||| | | | | || | Sbjct 978 GGGATGAGTCCGTTGGATGTTCCGTTGGTGCCGCGGATGTAGGAGTTCGAAGCGCGGATG 919 Query 245267 TTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATG 245326 | || || | || | || || ||| |||||||||||| ||||| ||||| Sbjct 918 CGGTGGACGGCAACACCAATGCCACCTGCGGACTTGGAGATGAGAGCGCACTGCTTGAGC 859 Query 245327 GTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGC 245386 ||||| |||||||| ||| |||| |||||| ||||||| ||||| || || ||| Sbjct 858 GTGTCGTAGATGCCCTCGATGGAGTCCTCCTTCATCGTGAGCAGGAAGCACGACGAGAGC 799 Query 245387 TGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT- 245445 || || || ||| || |||||| ||||| || ||||||| || ||| ||| ||| Sbjct 798 TGCGGACGAGGCGTGCCCGCGTTGAAGAGAGTAGGAGTGGCGTGCGTGAAG-AGCTGCTG 740 Query 245446 CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGC 245505 || |||| | || |||| |||| ||| ||||||||| ||| | || ||| Sbjct 739 AGAAAGGAGGTCATAGGTCTCCAGCACGGCGGGGATGTTGTCCTTGTGAAGGCCCACGGC 680 Query 245506 GCACCTCATGAGGGTGTGCTGGGGCGTCT---CGATGGGTCCCTCGGGTCCCTTGAGCAT 245562 | ||||||||| ||||||| ||| || ||||| ||| ||| ||||| | Sbjct 679 GACCCTCATGAGCATGTGCTGCGGCCGCTCCACGATGACTCCGTCG---ATCTTGAAGAG 623 Query 245563 GTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCT 245622 ||| ||||| ||||| |||||||| ||||||||||||||| |||||| | || | | Sbjct 622 GTACGAGCGTTCGAGGGTCTTGAAACCAAAGTACGAGTAGTGGAAGTCGCGCTCGTACTT 563 Query 245623 GACGGCTGCGTCGAGTCTCTCGGCGTGCTTCTGAC--TGACCTCGT 245666 || | || | ||| |||||||||| |||| |||||||| Sbjct 562 GATCGAGGCCTGGAGCGCGTCGGCGTGCT--TGACGAAGACCTCGT 519 >seq23741 Length=113318 Score = 306 bits (338), Expect = 7e-78 Identities = 451/628 (72%), Gaps = 12/628 (2%) Strand=Plus/Plus Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580 ||| ||||| ||||| |||||| | ||||| || ||||| | ||| || ||||||| Sbjct 77989 CTTGCAGATCGCCATTGAGAACATTCACTCGGAAATGTACTCGCTCCTGATCGACACGTA 78048 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 | | ||| | || ||| | | |||||| ||||| |||||| || ||| | Sbjct 78049 CGTAAAGGACGCGGTGGAGAAGGATCGCCTGTTCCGTGCCATCGAGACGGTGGCCTCGGT 78108 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGA--GTCC-CGACGCAACGTTCGG 42697 ||||||||||||||| ||||| || || ||||| | | | | || || || || | Sbjct 78109 CAAGAAGAAGGCGGAGTGGGCCCTGAAGTGGATTGCCAAGGACGGCGTCGAGACCTTTGC 78168 Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757 ||| | ||||| | ||| |||| |||||||||||||||||||| ||| ||||| | | Sbjct 78169 GGAGCGTCTGGTCGGCTTCGCCGCTGTCGAGGGCATCTTCTTCTCTGGCTCCTTCTGCGC 78228 Query 42758 CATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCA 42816 |||||||||||||||| || || || ||||| || || ||||||||||||| |||| Sbjct 78229 CATCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCTGGTCTTGCCTTCTCGAACGAGCTCA 78287 Query 42817 TCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCA 42876 ||||| | || ||||| || || | |||||||| ||||||| ||| ||| ||| Sbjct 78288 TCAGCCGCGATGAGGGTCTTCACTGCGACTTTGCTTGCCTCC---TCTACAGCATGCTCG 78344 Query 42877 GGCACAAGCCCTCGAAGGAGCGGGTCCGGGC-CATCATCACGGAGGCCGTGGAGATCGAG 42935 ||||||| | ||| || | || || |||||| ||||||||| ||||| ||| Sbjct 78345 TCAACAAGCCGACCTCGGA-CGTGCCCAAGCAGATCATCCTGGAGGCCGTCGAGATTGAG 78403 Query 42936 AAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATG 42995 ||||||||| |||| ||||||| ||||| | || ||||||||||| | |||||||| Sbjct 78404 AAGGAGTTCGTCACTGAGTCGCTCCCCGTCGCGCTCATCGGCATGAACGCCAACCTCATG 78463 Query 42996 TGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCT 43054 ||| |||||||| ||| |||||||| | ||| || || | || | || | | Sbjct 78464 TGCCAGTACATCGAGTTTGTCGCCGATCGTCTGCTCGTCGCTCTCGGCTGCGAGAAG-CA 78522 Query 43055 CTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAA 43114 || ||||| | ||| ||| || |||||| ||||||| | |||||||||||||| Sbjct 78523 CTTCAACAGTACCAACCCGTTCCCCTGGATGGAGCTCATCTCGCTTGAGGGCAAGACCAA 78582 Query 43115 CTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 ||| |||||| || || | ||| ||| Sbjct 78583 CTTCTTCGAGCGCCGGGTGGGCGAGTAC 78610 Score = 102 bits (112), Expect = 2e-16 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || ||||| | | ||| |||||||||||||| || |||| |||||||||| Sbjct 77664 ATCAAGTACCAGCGCGTGTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCC 77723 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAG 42404 ||||| | || || | | |||| | | ||||| || || | || |||| Sbjct 77724 GAGGAAGTCGATCTAGGCCCCGACATGAACCACTGGGTCTCCCTCACCGACGACGAGCGC 77783 Query 42405 TTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAAC 42464 ||| |||| || | || ||||||||||||||| ||||| || || ||||||| Sbjct 77784 CACTTCATCAAGCACGTCCTCGCCTTCTTCGCCGCCAGCGACGGTATCGTGGCTGAGAAC 77843 Query 42465 CTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTC 42524 |||||| | |||||||| || || ||| | || || || ||||||||||| ||| Sbjct 77844 CTGGCCGGGCGCTTCATGAAGGAAGTCCAGATCCCCGAAGCTCGTTGCTTCTACGGTTTC 77903 Query 42525 CAGATA 42530 ||| || Sbjct 77904 CAGGTA 77909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944054741424480