Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq19772 152 1e-31 seq22955 149 1e-30 seq18730 147 5e-30 seq23480 145 2e-29 seq24030 143 6e-29 seq22211 138 3e-27 seq18924 138 3e-27 seq23826 136 9e-27 seq23603 120 7e-22 seq11263 113 1e-19 seq1313 96.9 8e-15 seq4610 87.8 4e-12 seq22901 84.2 5e-11 >seq19772 Length=5961 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | |||||||| || | || ||| ||||| || || |||||||| Sbjct 1324 CCACCACGCAGACGCAGTACGAGGTGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGCC 1383 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || ||||| || ||| Sbjct 1384 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 1443 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| ||||||||||| || | |||||||| || ||| Sbjct 1444 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCGCTCGACTCGACT 1503 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || |||| ||||||||||| |||||||| Sbjct 1504 TCGAGAGTAATGGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 1550 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || || || ||||| || | || || || |||||| Sbjct 1588 TCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 1647 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || | || || || || || |||||||| ||| |||||||| Sbjct 1648 ATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 1707 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||||||| || |||||||||||||| ||||| ||||| || ||||||||| Sbjct 1708 TCGATCGTATCGCTCGACTCGACTTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTGACG 1767 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1768 AAGATCTGCAT 1778 >seq22955 Length=9686 Score = 149 bits (164), Expect = 1e-30 Identities = 150/194 (77%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || |||||||| ||||| || ||||| || | || || || |||||| Sbjct 8190 TCCTTTTGGATGTTGTAGTCGGCAAGCGTACGACCGTCCTCAAGCTGCTTACCGGCGAAG 8249 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || || ||| || || || || |||||||| ||| |||||| Sbjct 8250 ATAAGGCGCTGCTGG---TCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACG 8306 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||||||| || |||||||| || || ||||| ||||||| ||||||| Sbjct 8307 TTCTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTG 8366 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 8367 ACGAAGATCTGCAT 8380 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 7926 CCTCCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 7985 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| |||||||| || || ||| Sbjct 7986 AGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGG---TCGGGG 8042 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| ||||| || || || | ||||||||| || Sbjct 8043 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGGTATCGCTCGACTCG 8102 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||||||||| || || || ||||||||||| |||||||| Sbjct 8103 ACTTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 8152 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| || || || ||||| || |||||||| Sbjct 7663 CCACCACGAAGGCGAAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 7722 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| |||||||| || | || Sbjct 7723 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGA 7782 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || ||| ||||| || || | ||||||||| || || Sbjct 7783 ATACCCTCCTTGTCCTGGATCTTTTGTTTAACGTTCTCGATGGTATCGCTCGACTCGACC 7842 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || ||||||||||| ||||||| |||||| Sbjct 7843 TCAAGGGTGATCGTCTTGCCGGTCAAGGTCTTG 7875 Score = 116 bits (128), Expect = 9e-21 Identities = 173/240 (72%), Gaps = 14/240 (6%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 8382 CCGCCACGCAGACGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8441 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 8442 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGG---TCGGGG 8498 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 || || || || |||||||| ||| |||| ||||||||| || | || |||| Sbjct 8499 GGAATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTTTCGATCGTGTCCGAGCTC-- 8555 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || || ||||| ||||| ||||| ||||| || ||||| ||||| |||||||| |||| Sbjct 8556 -TCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGTTGTT 8614 >seq18730 Length=7279 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || ||||| ||| Sbjct 350 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCG 291 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || | || Sbjct 290 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 231 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| ||| |||| |||||| || || | ||||||||| || || Sbjct 230 ATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATGGTATCGCTCGACTCGAC 172 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||| || ||||| || || || ||||||||||| |||||||| Sbjct 171 TTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 124 >seq23480 Length=26370 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || ||||||||| Sbjct 12554 CCACCACGCAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 12613 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || || ||| Sbjct 12614 AGAGTGCGGCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGACGCTGCTG---GTCGGGG 12670 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| ||||| || || || | ||||||||| || Sbjct 12671 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGGTATCGCTCGACTCG 12730 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 12731 ACTTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 12780 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 12782 CCTCCGCGAAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 12841 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || | || Sbjct 12842 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 12901 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| ||| |||||||| || || | ||||||||| || || Sbjct 12902 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACC 12961 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || ||||||||||| ||||||| |||||| Sbjct 12962 TCAAGGGTGATCGTCTTGCCGGTCAAGGTCTTG 12994 Score = 95.1 bits (104), Expect = 3e-14 Identities = 89/111 (80%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || || |||||||| ||| |||| |||||| || |||| |||||||| || Sbjct 13125 GGAATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCAATAGTGTCGCTCGACTC 13183 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 13184 CACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 13234 >seq24030 Length=66970 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || ||||| || || ||||| || Sbjct 65964 CCACCACGAAGACGAAGGACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCC 66023 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || | || Sbjct 66024 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 66083 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | |||||| || || ||| Sbjct 66084 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTATCGCTAGACTCGACT 66143 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| || |||| ||||||||||| |||||||| Sbjct 66144 TCGAGGGTGATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 66190 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| || | || || || ||||| || ||||| ||| Sbjct 66192 CCTCCGCGCAGGCGAAGCACGAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCG 66251 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || |||||||| |||||||| || | || Sbjct 66252 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 66311 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| ||||||||||| || | || || || || Sbjct 66312 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCAGAGGACTCGACC 66371 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 66372 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 66418 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || |||||||| Sbjct 66420 CCACCACGAAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCC 66479 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || | || Sbjct 66480 AGGGTACGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 66539 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||| |||||||| || || | |||||| || || || Sbjct 66540 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTATCGCTAGACTCGACC 66599 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || |||| ||||||||||| |||||||| Sbjct 66600 TCGAGGGTAATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 66646 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || |||||||| ||| |||||||| || || | |||||||| || || || Sbjct 66725 CCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCAACCTCA 66784 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| || |||| ||||||||||| |||||||| Sbjct 66785 AGGGTGATGGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 66828 >seq22211 Length=15201 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || |||||||| ||||| || ||||| || | || || || |||||| Sbjct 4393 TCCTTTTGAATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAG 4334 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || || || || || || ||||| || ||| |||||||| Sbjct 4333 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTC 4274 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||||||| || |||||||| || || ||||| ||||||| |||||||||| Sbjct 4273 TCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGACG 4214 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 4213 AAGATCTGCAT 4203 Score = 127 bits (140), Expect = 5e-24 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 4657 CCACCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 4598 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || ||||| || | || || || |||||||| |||||||| || || Sbjct 4597 AGCGTACGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGACGCTGCTGGTCGGGAGGA 4538 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || || || || |||||||| ||| |||| |||||| || || | ||| |||| || Sbjct 4537 ATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATGGTATCCGAGCTC---TC 4482 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 4481 GACCTCGAGGGTGATCGTCTTACCGGTAAGGGTCTTCACGAAGATCTGCAT 4431 Score = 122 bits (134), Expect = 2e-22 Identities = 173/238 (73%), Gaps = 14/238 (6%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 4201 CCTCCACGCAGACGAAGCACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 4142 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 4141 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGG---TCGGGG 4085 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 || || || || |||||||| ||| |||| ||||||||| || | || |||| Sbjct 4084 GGAATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTTTCGATGGTGTCCGAGCTC-- 4028 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| ||||||||||| ||||| || ||||| ||||| |||||||| ||| Sbjct 4027 -TCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATAATG 3971 >seq18924 Length=24070 Score = 138 bits (152), Expect = 3e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | || || || ||||| || |||||||| Sbjct 17760 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 17819 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || | || Sbjct 17820 AGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 17879 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| ||| |||| |||||| || || | ||||||||| || || Sbjct 17880 ATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATGGTATCGCTCGACTCGAC 17938 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||| || ||||| || || || ||||||||||| |||||||| Sbjct 17939 TTCGAGCGTAATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 17986 Score = 138 bits (152), Expect = 3e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || ||||||||| Sbjct 17988 CCACCACGAAGGCGAAGCACGAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCG 18047 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || ||||| || ||| Sbjct 18048 AGGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 18107 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || |||||||| ||| || |||||||| || || | ||| || || || Sbjct 18108 ATGCCTTCCTTGTCCTGGATCTTTTGC-TTCACGTTCTCGATCGTGTCGGAGGACTCGAC 18166 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 18167 CTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 18214 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || || ||||| || ||||||||| Sbjct 17532 CCACCACGCAGGCGAAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 17591 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || || Sbjct 17592 AGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 17651 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | || |||| || Sbjct 17652 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTC---TCG 17708 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||||||||| || |||| |||||||||||| |||||||| Sbjct 17709 ACTTCGAGGGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 17758 >seq23826 Length=10614 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 8747 CCTCCACGAAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8688 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 8687 AGGGTACGGCCGTCCTCAAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGG---TCGGGG 8631 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | ||||||||| || Sbjct 8630 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCG 8571 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || |||| |||||||||||| |||||||| Sbjct 8570 ACTTCGAGAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 8521 Score = 131 bits (144), Expect = 4e-25 Identities = 170/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| ||||| || | || || || ||||| || |||||||| Sbjct 8519 CCGCCACGCAGACGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8460 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| ||| || ||| Sbjct 8459 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGCTGCTGA---TCGGGG 8403 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || |||||||| ||| |||| ||||||||| || | || || || Sbjct 8402 GGAATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTTTCGATGGTGTCCGAGGACTC 8344 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 8343 GACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 8293 Score = 113 bits (124), Expect = 1e-19 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || || || || |||||||| Sbjct 8975 CCACCACGAAGGCGGAGCACAAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAGTCGGCA 8916 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || || ||| Sbjct 8915 AGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGG---TCGGGG 8859 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || |||||||| ||| |||| |||||| || |||| || || || Sbjct 8858 GGAATACCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCAATAGTGTCCGAGGACTC 8800 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 8799 GACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 8749 >seq23603 Length=18425 Score = 120 bits (132), Expect = 7e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| ||||| || | || || || ||||| || ||||||||| Sbjct 28 CCACCGCGCAGGCGAAGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 87 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || Sbjct 88 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 147 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| ||| || |||||||| || || | || || || || Sbjct 148 ATACCCTCCTTGTCCTGGATCTTTTGC-TTCACGTTCTCGATCGTGTCAGAGGACTCGAC 206 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || || || ||||||||||| |||||||| Sbjct 207 CTCGAGAGTAATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 254 Score = 111 bits (122), Expect = 4e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| || | ||| || || ||||| || ||||| ||||||||||| ||||| Sbjct 271 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCC 330 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || |||||||| || ||||| || || || || || || ||| Sbjct 331 TCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCC 390 Query 288382 TGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||||| ||| || |||||||| || || | || || || || ||||| ||||| || Sbjct 391 TGGATCTTTTGC-TTCACGTTCTCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGT 449 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||| ||||| |||||||| Sbjct 450 CTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 482 >seq11263 Length=148 Score = 113 bits (124), Expect = 1e-19 Identities = 93/111 (84%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| ||||| || |||||||| ||| |||| |||||| || || | ||||||||| || Sbjct 147 GGGATGCCTTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATCGTATCGCTCGACTC 89 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 88 GACTTCGAGAGTGATGGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 38 >seq1313 Length=127 Score = 96.9 bits (106), Expect = 8e-15 Identities = 86/105 (82%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 288376 TTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434 || |||||||| ||| |||| |||||| || || | ||||||||| || || ||||| || Sbjct 2 TTGTCCTGGATCTTTTGCTT-CACGTTCTCGATCGTATCGCTCGACTCGACCTCGAGGGT 60 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 ||||||||| ||||| || ||||| ||||| |||||||| |||| Sbjct 61 GATCGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGTTGTT 105 >seq4610 Length=127 Score = 87.8 bits (96), Expect = 4e-12 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 288339 GAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCA 288397 |||||| || ||||| || | || || || || || |||||||| ||| |||| || Sbjct 1 GAAGATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTT-CA 59 Query 288398 CGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 ||||||| || | |||||||| || || || || ||||||||||| || |||| |||| Sbjct 60 CGTTTTCGATCGTGTCGCTCGACTCAACCTCAAGGGTGATCGTCTTGCCAGTCAAGGTCT 119 Query 288458 TGACGAA 288464 ||||||| Sbjct 120 TGACGAA 126 >seq22901 Length=26441 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || || | |||| ||| ||| || || || ||||| |||||| Sbjct 2980 CCTCCGCGCAGGCGTAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTATACTCGGCG 2921 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || ||||| || | ||||| || || ||||||| ||||| ||| || Sbjct 2920 AGCGTACGGCCGTCCTCCAGCTGTTTGCCAGCAAAGATCAAGCGCTGCTGATCGGGAGGA 2861 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-GCTCGATTCTAC 288425 |||||||| || ||||| | || || || || ||| || | ||| | || || || Sbjct 2860 ATTCCTTCCTTGTCCTGCAGCTTAGCCTTGACAGCTTCAATGGTATCGGAAGGACTC-AC 2802 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || | | ||| || || || ||||||| ||| |||||||| Sbjct 2801 ATCCACGGTTACGGACTTGCCAGTGAGGGTCTTGATGAAGATCTGCAT 2754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179290175068444