Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq23003 262 5e-65 seq19361 210 3e-49 seq23741 116 4e-21 seq23882 86.0 7e-12 seq20001 86.0 7e-12 >seq23003 Length=12893 Score = 262 bits (290), Expect = 5e-65 Identities = 1070/1660 (64%), Gaps = 55/1660 (3%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTT---CCATGCGTACATATGCATTGAA 109464 || || || ||||| || || ||||| || ||| ||| ||||| | ||||| ||| Sbjct 2373 CGGAGGTAGTACATGCCAGTCTTGAGGCC---CTTGCGCCAAGCGTAGAAGTGCATCGAA 2317 Query 109465 GAGAGTTTGGAAAGTGTCGGACTCTCC-ATAAACAAGTTCATCGACTGAGACTGATCGAT 109523 | ||| |||| | | || ||| || || | | ||| | ||||| ||||||||| Sbjct 2316 GTGAGCTTGGCGAAGGAAGG-CTCGCCCATGTAGATGTTGAGGGACTGGCTCTGATCGAT 2258 Query 109524 GAATCGACCACGATCAGCCGCCATGTCGATGA-TACACTTTTGGCTAATTTCCCAGACAG 109582 | | | ||||| || ||||||||||||| ||| | | | ||| ||||| |||| Sbjct 2257 GTACGCAGAGCGATCGGCAGCCATGTCGATGACTACGCGCTGCGG-AATCTCCCACACAG 2199 Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAG 109642 ||||||||| ||||||| ||||||||| || || ||||||| || | ||||| | Sbjct 2198 TCTTGTACAGCTTCTTGAGATCATCGGGGATCTCGTCGATGTTCTGCACTGAGCC----G 2143 Query 109643 CCTTCACC-ATGAGATCCTTCATCT---CTTTCGACCAGAGACCGACCTTTTTGAGATCG 109698 | | | | ||| | ||| | | |||||| | || || | || ||| Sbjct 2142 TTGTGAGCGACGAGTTTGTTCTTGAGGGCGGCCGACCACAAGCCTCGCTCCATCAGGTCG 2083 Query 109699 TCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATG 109758 | || |||| |||||| ||| || || || ||||| |||| || |||||| Sbjct 2082 CGGAGGAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCAAGAATGCGACGTGTGTAGATA 2023 Query 109759 TTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTG 109818 || | ||||| || ||||| ||||| |||||||| || || |||| ||||| || || Sbjct 2022 TTGGAGGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGTGAGGTGGATGCCGTA 1963 Query 109819 GGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCC--GCT--CACG 109874 |||||||| |||| ||| || ||| | |||||| | | | | | | | |||| Sbjct 1962 GGCATGGGCGCCACGAGGAGGGAGTTCCTGAGACCGTGC----TGAGCGATGTTGGCACG 1907 Query 109875 CATTGCGTCCCAATCATAAC-GACCACTAAATTTAGTCTCACCATCCCACATATCTGGTT 109933 | | |||| || | | | || | ||| |||| ||| | ||| |||| Sbjct 1906 GAGGGTAGCCCAGTCCCACCTGTCCG----AGGGAGTAACACC---CCAGAGATCGGGTT 1854 Query 109934 GAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGG 109993 | || ||||| | ||| || || || | | ||| | |||| ||| || Sbjct 1853 GGAGCTTGCCCTCGGAAGCCGGCGAGCCAGCATACGTAGGGTAGGTGCCCTGCTCCTGGG 1794 Query 109994 CCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGC-ATTC 110052 ||| |||| ||||| ||||| || | || || ||||| || ||| | || ||| Sbjct 1793 CCATCTCGTTGGAAGCAGTGAGTGCGGCGTAGTAGATGGTCTCGAAGATA-GCGCGATTG 1735 Query 110053 ATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAA-AGAATAAACACATCCGCTAG 110111 | ||| | ||| | | || |||| | | || || ||||| || || || || Sbjct 1734 AGCTCGCGGGCCTCCTGGCTCTCCCAGGGGC-AGCGCATGAGCATAAAGACGTCGGCAAG 1676 Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171 |||||||||||| ||||| || || || || |||||| ||| || || || Sbjct 1675 ACCCTGAACACCAAGACCGATCGGACGGTGGCGCATGTTCGAGTTGCGGGCCTCAGGGAC 1616 Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231 ||||| ||||| |||||| ||| ||||| || || || || | || Sbjct 1615 TGGGTAGTAGTTGATGTCGATCACCTTGTTGAGGTTGCGGGTGACTACTTTGACCACGTC 1556 Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAAT 110291 | ||| || | || ||||||| ||| | || ||| || ||||| ||||| | Sbjct 1555 GTAGAGCTTCTTGTGATCGAACT-----GTC-CGTTGACGACGTACTTGGGAAGAGCGAG 1502 Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACA 110351 ||||| || |||||||||| ||| || ||||| | | | ||||| || Sbjct 1501 CGACGCGAGGTTGCACACAGCGACCTCATCAGGAGACGTGTACTGAATGACCTCCGTGCA 1442 Query 110352 CAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATC 110411 |||||| || || ||| || | || || ||| ||||| |||| ||||| | ||| Sbjct 1441 CAAGTTCGAGGACTGGATGGTGCCAAGGTGCTGCTGGTTCGACTTGGCATTGCACGAATC 1382 Query 110412 CTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATAC 110471 ||||||||| ||||| || || || || || |||| |||| |||||||| ||| | Sbjct 1381 CTTATAGAGGATGTAAGGCGTGCCGGTCTCGATCTGCGACTCGAGAATGGAGAACCACAG 1322 Query 110472 ATCGGCGGC---GGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAA 110528 || ||| | |||| ||| |||| | ||||| | |||||| |||| Sbjct 1321 CTCCTGGGCCTTGACGACACG-GCG--AGCGCGGCCTTCGTTCTCGTAACGCACGTACTT 1265 Query 110529 GTCCTCAAATTCCTGTCCGTA-CACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 ||||| || || | || | ||| || | || || ||| | || ||| ||||||| Sbjct 1264 CTCCTCGAACTCGTCGCCCCAGCAC-TCGAAGAGGCCTGGCGCTTCGTTGGGGCAGAAGA 1206 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | ||||| | || || |||| || | ||||||||||||||| || | ||||| | Sbjct 1205 GCGACCAGTCGCCTCCGGCCTCGACGCGCTTCATGAACAGGTCGGGCACCCACAGGCCAT 1146 Query 110648 AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGT 110707 |||| || ||||| ||| ||| || | || ||||| ||||| | || | Sbjct 1145 AGAAGAGATCACGAGCACGGTTCTCCTCCTTGCCATGGTTCTTCTTGAGCTCAAGGAAAT 1086 Query 110708 CCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGAC 110764 | | ||| || | |||||| || || ||||||| |||| | |||||| || | || Sbjct 1085 CGAAGATGTCGGCGTGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTGCGCTTGCCAC 1026 Query 110765 CCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCAT 110824 | |||| | ||| ||||| || || | ||| | || | |||||| || || | ||| | Sbjct 1025 CGCCCTGATCAACGTAGCGAGCGGTATCGTTGTAAACACGGAGCATGGGGATGAGTCCGT 966 Query 110825 CGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCA 110884 |||| || || || || | || ||| || || || ||| ||||| | Sbjct 965 TGGATGTTCCGTTGGTGCCGCGGATGTAGGAGTTCGAAGCGCGGATGCGGTGGACGGCAA 906 Query 110885 TACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATAC 110944 |||||| ||||| || |||| || | || |||| |||| || | || || | Sbjct 905 CACCAATGCCACCTGCGGACTTGGAGATGAGAGCGCACTGCTTGAGCGTGTCGTAGATGC 846 Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004 | || || || || |||| | | | || ||||| || || | ||| |||||||||| Sbjct 845 CCTCGATGGAGTCCTCCTTCATCGTGAGCAGGAAGCACGACGAGAGCTGCGGACGAGGCG 786 Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 | ||||| |||||||| ||||| || || || |||| || Sbjct 785 TGCCCGCGTTGAAGAGAGTAGGAGTGGCGTGCGTGAAGAG 746 >seq19361 Length=29087 Score = 210 bits (232), Expect = 3e-49 Identities = 1057/1658 (64%), Gaps = 51/1658 (3%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTT---CCATGCGTACATATGCATTGAA 109464 ||||| || ||||| || || ||||| || ||| ||| ||||| | ||||| ||| Sbjct 13300 CGAAGGTAGTACATGCCGGTCTTGAGGCC---CTTGCGCCAAGCGTAGAAGTGCATCGAA 13356 Query 109465 GAGAGTTTGGAAAGTGTCGGACTCTCC-ATAAACAAGTTCATCGACTGAGACTGATCGAT 109523 | ||| |||| | | || |||||| || | | ||| | |||||| ||| ||||| Sbjct 13357 GTGAGCTTGGCGAAGGAAGG-CTCTCCCATGTAGATGTTGAGCGACTGGCTCTGGTCGAT 13415 Query 109524 GAATCGACCACGATCAGCCGCCATGTCGATGAT-ACACTTTTGGCTAATTTCCCAGACAG 109582 | || | || || || ||||||||||||| || | | | ||| ||||| |||| Sbjct 13416 GTATGCAGAGCGGTCGGCGGCCATGTCGATGACGACGCGCTGCGG-AATCTCCCACACAG 13474 Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAG 109642 ||||||||| ||||||| ||||| || || || ||||||| || | ||||| Sbjct 13475 TCTTGTACAGCTTCTTGAGGTCATCAGGGATCTCGTCGATGTTCTGCACGGAGCCGTTG- 13533 Query 109643 CCTTCACCATGAGATCCTTCATCT---CTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699 | ||| ||| | ||| | | |||||| | || || | || ||| Sbjct 13534 --TGGGCCACGAGTTTGTTCTTAAGGGCGGCCGACCACAAGCCTCGCTCCATCAGGTCGC 13591 Query 109700 CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGT 109759 | || |||| |||||| ||| || || || ||||| |||| || |||||||| Sbjct 13592 GGAGGAGGTGCTCGTTGACGACGGTGAAGTCGCCCGCAAGAATGCGACGTGTGTAGATGT 13651 Query 109760 TAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGG 109819 | | ||||| || ||||| ||||| |||||||| || || || | ||||| ||||| | Sbjct 13652 TGGAGGTGTACGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGAGAGGTGGATGCTGTAG 13711 Query 109820 GCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCC--GCT--CACGC 109875 ||||||| |||| ||| || ||| | ||| || | | | | | | | |||| Sbjct 13712 GCATGGGTGCCACGAGGAGGGAGTTCCTGAGGCCGTGC----TGAGCGATGTTGGCACGG 13767 Query 109876 ATTGCGTCCCAATCATAAC-GACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTG 109934 | | |||| || | | | || | | | |||| | || || || Sbjct 13768 AGGGTAGCCCAGTCCCACCTGTCCGAGGGGGTAATGC-------CCCAGAGGTCGGGCTG 13820 Query 109935 AAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGC 109994 || ||||| | ||| || || ||| | | | ||| | |||| ||| ||| Sbjct 13821 GAGCTTGCCCTCGGAAGCTGGCGAGCCCGCGTATGTAGGGTAAGTACCCTGCTCCTTGGC 13880 Query 109995 CAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGC-ATTCA 110053 || ||| ||||| ||||| || | || || ||||| || ||| | || ||| | Sbjct 13881 CATCTCATTAGAAGCAGTGAGTGCAGCGTAGTAGATGGTCTCGAAGATA-GCGCGATTGA 13939 Query 110054 TGAGGCGAGACTCTTCACAGTCGAA-GGGAAGACCACAAAGAATAAACACATCCGCTAGA 110112 ||| | ||| | | || | ||| || || | | || || || || || ||| Sbjct 13940 GCTCGCGGGCCTCCTGGCTCTCCCATGGGCAGCGCATGA-GCATGAAGACGTCGGCAAGA 13998 Query 110113 CCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACG 110172 ||||||||||| ||||| || ||||| || |||||| ||| || || || Sbjct 13999 CCCTGAACACCAAGACCGATCGGGCGGTGACGCATGTTCGAGTTGCGGGCCTCAATGACT 14058 Query 110173 GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCA 110232 || || ||||| |||||| ||| ||||| || ||| || ||| | || Sbjct 14059 GGATAGTAGTTGATGTCGATCACCTTGTTGAGGTTGCGCGTGACGACCTTGACCACGTCG 14118 Query 110233 TGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATA 110292 || || | || ||||||| | | | || ||| || || || ||||| | Sbjct 14119 AAAAGCTTCTTGTGATCGAACT-----GGC-CGTTGACGACGTACTTCGGAAGAGCGAGC 14172 Query 110293 GACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACAC 110352 ||||| || |||||||| | ||| || ||| | | | | ||||| ||| Sbjct 14173 GACGCGAGGTTGCACACTGCGACCTCATCAGGAGACGTGAACTGAATGACCTCCGTGCAC 14232 Query 110353 AAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCC 110412 ||||| || || ||| || | || || ||| ||||| |||| ||||| | ||| Sbjct 14233 AAGTTCGAGGACTGGATGGTGCCGAGGTGCTGCTGGTTCGACTTGGCATTGCACGAGTCC 14292 Query 110413 TTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACA 110472 || || || ||||| || || || || || ||||||| | |||||||| ||| | Sbjct 14293 TTGTAAAGGATGTAAGGCGTGCCGGTCTCGATCTGTGATTCGAGAATGGAGAACCACAGC 14352 Query 110473 TCGGCGGCGGGGACAGTTGCGTT-AGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531 || ||| ||| | ||| |||| | || || | |||||| |||| || Sbjct 14353 TCCTGGGCCTTGAC-GACGCGGCGAGCGCGTCCCTCATTCTCGTAGCGCACGTACTTCTC 14411 Query 110532 CTCAAATTCCTGTCCGTA-CACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGG 110590 || || |||| || | ||| || | || || ||| | || |||||||||||| | Sbjct 14412 TTCGAACTCCTCACCCCAGCAC-TCGAAGAGGCCGGGCGCTTCGTTGGGACAGAAGAGCG 14470 Query 110591 ACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG-AG 110649 |||||| || || ||||||| | ||||||||||||||| || | ||||| |||| || Sbjct 14471 ACCAATCGCCTCCGGCCTCAACGCGCTTCATGAACAGGTCCGGCACCCACA-GGCCGTAG 14529 Query 110650 AAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCC 110709 || || ||||| || ||| || | || ||||| ||||| | || || Sbjct 14530 AAGAGATCACGAGCGCGGTTCTCCTCCTTGCCATGGTTCTTCTTGAGCTCAAGGAAATCG 14589 Query 110710 ATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCC 110766 | |||||| | |||||| || || ||||||| |||| | ||||||||| | ||| Sbjct 14590 AAGATATCGGCGTGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTACGCTTGCCACCG 14649 Query 110767 GCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCG 110826 |||| | ||| ||||| || || | ||| |||| | ||||| || || | ||||| Sbjct 14650 CCCTGATCAACGTAGCGAGCGGTATCGTTGTAGACACGAAGCATGGGGATGAGTCCATTC 14709 Query 110827 GATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATA 110886 || || || || || | || || || || || ||| ||| | | Sbjct 14710 GACGTTCCGTTGGTGCCGCGGATGTACGAGTTCGAAGCGCGGATGCGGTGAACGGCAACT 14769 Query 110887 CCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCA 110946 ||||| ||||| || |||| || | || |||| |||| || | || || || Sbjct 14770 CCAATGCCACCGGCAGACTTGGAGATGAGAGCGCACTGCTTGAGCGTGTCGTAGATGCCC 14829 Query 110947 TCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTT 111006 || || || || |||| | | | || ||||| || |||| ||| ||||||||||| Sbjct 14830 TCGATGGAGTCCTCCTTCATCGTGAGCAGGAAGCACGACGACAGCTGCGGACGAGGCGTG 14889 Query 111007 CCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 ||||| |||||||| ||||| || || || |||| || Sbjct 14890 CCCGCGTTGAAGAGAGTAGGAGTGGCGTGCGTGAAGAG 14927 >seq23741 Length=113318 Score = 116 bits (128), Expect = 4e-21 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| || ||||| || ||||||||| || |||| ||| ||||||||||| || Sbjct 78309 TGAAGACCCTCATCGCGGCTGATGAGCTCGTTCGAGAAGGCAAGACCAGGCATGAGGCCG 78250 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| |||||||| || || ||||| |||||||||||||| ||| | Sbjct 78249 CGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCAGAGAAGAAGATGCCCTCGACAGCG 78190 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGA-------CTTGTCGAACCACTTGAG 119680 ||||| ||| |||||||| || ||||||| || |||| | | |||||| || Sbjct 78189 GCGAAGCCGACCAGACGCTCCGC-AAAGGTCTCGACGCCGTCCTTGGCAATCCACTTCAG 78131 Query 119681 AGCCCAGTTGGCCTT 119695 ||||| | ||||| Sbjct 78130 GGCCCACTCCGCCTT 78116 >seq23882 Length=50760 Score = 86.0 bits (94), Expect = 7e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 26902 AAGAAAGTCTGGTATGCACCCAACAAATTTGAGTCATATGGGGAGGAAGAGATTAAAGCC 26961 ||||| || | || || ||||| |||||| | || |||||| | ||||| ||||| Sbjct 21914 AAGAAGGTTTACTACGCTGCCAACGGGTTTGAGGCCTACGGGGAGCAGGAGATGCAAGCC 21855 Query 26962 GTTGAGGCTTGCTTGCGCGATGGCTGGCTCGCTGGCTTTGGTGATCGTACTGTGGAATTT 27021 ||| ||| ||| |||| |||||||||||||||||||| | || | ||| Sbjct 21854 GTTCAGGAGTGCCTGCGGAGCGGCTGGCTCGCTGGCTTTGGAAGTTACACACAGCGCTTT 21795 Query 27022 GAAAAGAGGGTCGCTGACCTCTTCGGTAAGAAATTTGGACTATTTGTGAACTCTGGC 27078 || | | ||||| ||||| ||||| ||||| || || ||||||||||| ||| Sbjct 21794 GAGAGACGCGTCGCCGACCTGTTCGGGAAGAAGCACGGCCTCTTTGTGAACTCGGGC 21738 >seq20001 Length=20085 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/181 (71%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 26902 AAGAAAGTCTGGTATGCACCCAACAAATTTGAGTCATATGGGGAGGAAGAGATTAAAGCC 26961 ||||| |||| || || ||||| ||||| | || || ||| ||||||| ||||| Sbjct 4025 AAGAAGGTCTACTACGCCGCCAACGGCTTTGAAGCTTACGGTGAGCAAGAGATCCAAGCC 3966 Query 26962 GTTGAGGCTTGCTTGCGCGATGGCTGGCTCGCTGGCTTTGG----TGATCGTACTGTGGA 27017 ||| ||| |||||||||| || ||||||||||||||||| | || | || Sbjct 3965 GTTCAGGATTGCTTGCGCAGCGGATGGCTCGCTGGCTTTGGAAGCTACACGCAGCGT--- 3909 Query 27018 ATTTGAAAAGAGGGTCGCTGACCTCTTCGGTAAGAAATTTGGACTATTTGTGAACTCTGG 27077 ||||| | | ||||| ||||| ||| | ||||| || || ||||||||||| || Sbjct 3908 -TTTGAGAGCCGCGTCGCCGACCTGTTCAGAAAGAAGCACGGCCTCTTTGTGAACTCGGG 3850 Query 27078 C 27078 | Sbjct 3849 C 3849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588798585704400