Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq23603 111 1e-19 seq24030 107 1e-18 seq23480 102 5e-17 seq22955 102 5e-17 seq19772 102 5e-17 seq23826 98.7 6e-16 seq22211 95.1 8e-15 seq18924 95.1 8e-15 seq18730 95.1 8e-15 seq22901 87.8 1e-12 >seq23603 Length=18425 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || ||||| || ||||| || Sbjct 292 TCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 351 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| Sbjct 352 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTC 411 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| || ||| || |||| ||| ||||| || |||||||| |||||||| Sbjct 412 TCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACG 471 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 472 AAGATCTGCAT 482 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 64 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAG 123 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| Sbjct 124 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTC 183 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| || ||| || |||| || ||||| || |||||||| ||||| || Sbjct 184 TCGATCGTGTCAGAGGACTCGACCTCGAGAGTAATGGTCTTACCCGTGAGGGTCTTGACG 243 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 244 AAGATCTGCATA 255 >seq24030 Length=66970 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || ||||| || || || || Sbjct 66228 TCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 66287 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| | Sbjct 66288 ATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTT 66347 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| || ||| || |||| ||| ||||| || || ||||| ||||| || Sbjct 66348 TCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 66407 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 66408 AAGATCTGCATA 66419 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 66456 TCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCAAGCTGCTTACCAGCGAAG 66515 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 66516 ATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 66575 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | | ||| || |||| ||| ||||| || || || | ||||| || Sbjct 66576 TCGATCGTATCGCTAGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAAGGTCTTGACG 66635 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 66636 AAGATCTGCATA 66647 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 66000 TCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 66059 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 66060 ATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 66119 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | | ||| || |||| ||| || || || || || | ||||| || Sbjct 66120 TCGATCGTATCGCTAGACTCGACTTCGAGGGTGATCGTCTTGCCAGTCAAGGTCTTGACG 66179 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 66180 AAGATCTGCATA 66191 >seq23480 Length=26370 Score = 102 bits (112), Expect = 5e-17 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || ||||| || ||||| || Sbjct 12590 TCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCAAGCTGCTTACCGGCGAAG 12649 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || || || Sbjct 12650 ATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCAC--AT 12707 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | || | | ||| || |||| ||| ||||| || |||||||| ||||| | Sbjct 12708 TCTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGA 12767 Query 34969 CAAAGATCTGCATA 34982 | |||||||||||| Sbjct 12768 CGAAGATCTGCATA 12781 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 13272 TCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAG 13331 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| ||||| || || ||| Sbjct 13332 ATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGT-- 13389 Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| || ||| || |||| ||| ||||| || || ||||| ||||| Sbjct 13390 --TCTCGATGGTATCCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 13447 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 13448 CACGAAGATCTGCATGTT 13465 >seq22955 Length=9686 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 8418 TCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 8477 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| | Sbjct 8478 ATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTT 8537 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| ||| ||||| || || ||||| |||||||| Sbjct 8538 TCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACG 8597 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 8598 AAGATCTGCATGTT 8611 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 7962 TCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAG 8021 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || || || Sbjct 8022 ATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCAC--AT 8079 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | || | | ||| || |||| ||| || || || |||||||| ||||| | Sbjct 8080 TCTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGA 8139 Query 34969 CAAAGATCTGCATA 34982 | |||||||||||| Sbjct 8140 CGAAGATCTGCATA 8153 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || ||||| ||||| | ||| | || | || || ||||| || ||||| || Sbjct 8190 TCCTTTTGGATGTTGTAGTCGGCAAGCGTACGACCGTCCTCAAGCTGCTTACCGGCGAAG 8249 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 8250 ATAAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 8309 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | | ||| || |||| || ||||| || || || | |||||| || Sbjct 8310 TCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGACG 8369 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 8370 AAGATCTGCATA 8381 >seq19772 Length=5961 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 1816 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAG 1875 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| Sbjct 1876 ATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTC 1935 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| || ||| || || | ||| ||||| || || ||||| |||||||| Sbjct 1936 TCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACG 1995 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 1996 AAGATCTGCAT 2006 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || |||||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 1359 TTCCTTTTGAATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCAGCGAA 1418 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 1419 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1478 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | |||| || | | ||| || |||| || ||||| || ||||| | ||||| || Sbjct 1479 TTCGATCGTGTCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCCGTCAAGGTCTTGAC 1538 Query 34970 AAAGATCTGCATA 34982 |||||||||||| Sbjct 1539 GAAGATCTGCATA 1551 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 1588 TCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 1647 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 1648 ATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 1707 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | | ||| || |||| || ||||| || || ||||| ||||| || Sbjct 1708 TCGATCGTATCGCTCGACTCGACTTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTGACG 1767 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 1768 AAGATCTGCATA 1779 >seq23826 Length=10614 Score = 98.7 bits (108), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 8483 TCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAG 8424 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| ||||| || || ||| | Sbjct 8423 ATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTT 8364 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| || || || || ||||| |||||||| Sbjct 8363 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACG 8304 Query 34971 AAGATCTGCATATT 34984 |||||||||||||| Sbjct 8303 AAGATCTGCATATT 8290 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | || | || || ||||| || || || || Sbjct 8939 TCCTTCTGTATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAAG 8880 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| Sbjct 8879 ATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTC 8820 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| || || || || ||||| |||||||| Sbjct 8819 TCAATAGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACG 8760 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 8759 AAGATCTGCATA 8748 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | || | || || ||||| || || || || Sbjct 8711 TCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCAAGCTGCTTACCCGCGAAG 8652 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 8651 ATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 8592 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | | ||| || |||| || ||||| || || || | |||||| || Sbjct 8591 TCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCAGTCAAAGTCTTGACG 8532 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 8531 AAGATCTGCATA 8520 >seq22211 Length=15201 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| ||||| | || | || | || || ||||| || ||||| || Sbjct 4393 TCCTTTTGAATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAG 4334 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||||||| || ||| Sbjct 4333 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTC 4274 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | | ||| || |||| || ||||| || || || | |||||| || Sbjct 4273 TCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGACG 4214 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 4213 AAGATCTGCATA 4202 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 4165 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAG 4106 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| | Sbjct 4105 ATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTT 4046 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| || || || || ||||| ||||| || Sbjct 4045 TCGATGGTGTCCGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTAACG 3986 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 3985 AAGATCTGCATA 3974 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || ||||| || || || || Sbjct 4621 TCCTTCTGGATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGCTTACCCGCGAAG 4562 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || || Sbjct 4561 ATAAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCAC---- 4506 Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| || ||| || |||| ||| || || || || || || ||||| Sbjct 4505 GTTCTCGATGGTATCCGAGCTCTCGACCTCGAGGGTGATCGTCTTACCGGTAAGGGTCTT 4446 Query 34967 CACAAAGATCTGCATA 34982 ||| |||||||||||| Sbjct 4445 CACGAAGATCTGCATA 4430 >seq18924 Length=24070 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 17796 TCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAG 17855 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| Sbjct 17856 ATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTC 17915 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | | ||| || |||| || ||||| || |||||||| ||||| || Sbjct 17916 TCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTACCCGTGAGGGTCTTGACG 17975 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 17976 AAGATCTGCATA 17987 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 18024 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAAG 18083 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| || || ||| Sbjct 18084 ATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTC 18143 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || |||| || ||||| || || ||||| |||||||| Sbjct 18144 TCGATCGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACG 18203 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 18204 AAGATCTGCAT 18214 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 17568 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAG 17627 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||||| || ||| Sbjct 17628 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTC 17687 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| ||| || || || || || | |||||| || Sbjct 17688 TCGATCGTGTCCGAGCTCTCGACTTCGAGGGTGATCGTCTTGCCAGTCAAAGTCTTGACG 17747 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 17748 AAGATCTGCATA 17759 >seq18730 Length=7279 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || || || || Sbjct 314 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAG 255 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || || ||| Sbjct 254 ATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTC 195 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | | ||| || |||| || ||||| || |||||||| ||||| || Sbjct 194 TCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTGACG 135 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 134 AAGATCTGCATA 123 >seq22901 Length=26441 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| ||| |||||||||||||| || | || | || | || ||| Sbjct 2962 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTATACTCGGCGAGCGTACGGCCGTCCTCC 2903 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||| || | || ||||| || | || | || |||||||| Sbjct 2902 AGCTGTTTGCCAGCAAAGATCAAGCGCTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGC 2843 Query 34893 ATCTTCTGTTTGACGGATGCTATCG-ATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 | ||| ||||| | | | || | || || ||| ||||| ||||||| || || Sbjct 2842 AGCTTAGCCTTGACAGCTTCAATGGTATCGGAAGGACTC-ACATCCACGGTTACGGACTT 2784 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||| | ||||||||||| Sbjct 2783 GCCAGTGAGGGTCTTGATGAAGATCTGCAT 2754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324538256937744