Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq19604 82.4 2e-11 >seq19604 Length=58456 Score = 82.4 bits (90), Expect = 2e-11 Identities = 87/112 (78%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 37403 TCGACGAGACGCCAGCG-GCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCC 37461 ||||||| ||||| ||| || || ||||||||||| |||| ||| ||| ||||| | | Sbjct 10499 TCGACGAAACGCC-GCGAGCCTATAAGGACATCGACTCGGTAATGAACGCCCAATCGGAC 10557 Query 37462 CTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGAG 37513 || |||| ||| ||||||||||| || || | ||||||||||| |||| Sbjct 10558 CTCGTGGCCATAGTGCACACGCTCAAGCAGGTGCTCTGCGTGAAGGGCTGAG 10609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139243342197176