Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq19772 156 4e-33 seq22955 143 2e-29 seq23826 140 3e-28 seq24030 134 1e-26 seq22211 134 1e-26 seq18924 134 1e-26 seq23480 131 2e-25 seq23603 125 6e-24 seq18730 122 8e-23 seq11646 105 6e-18 seq4610 93.3 4e-14 seq21130 86.0 6e-12 seq16600 84.2 2e-11 >seq19772 Length=5961 Score = 156 bits (172), Expect = 4e-33 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| ||||||| ||| || |||| || |||||||| || || || Sbjct 1360 TCCTTTTGAATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCAGCGAAG 1419 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | ||| | || |||||||||| |||||| ||||||| || Sbjct 1420 ATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTT 1479 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||||||| || || || | || || || ||||||||||| || || || Sbjct 1480 TCGATCGTGTCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCCGTCAAGGTCTTGACG 1539 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 1540 AAGATCTGCAT 1550 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || |||| || |||||||| || || || Sbjct 1587 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 1646 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||||| | Sbjct 1647 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1706 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| |||||||| || || || | |||||| || ||||| || | || || || Sbjct 1707 CTCGATCGTATCGCTCGACTCGACTTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTGAC 1766 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 1767 GAAGATCTGCAT 1778 Score = 120 bits (132), Expect = 3e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| || |||| || ||||||||||| || || Sbjct 1815 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 1874 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||||||||||| | Sbjct 1875 GATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 1934 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || || | || ||||| Sbjct 1935 CTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 1994 Query 35725 AAATATCTGCATTCTG 35740 || |||||||| ||| Sbjct 1995 GAAGATCTGCATGCTG 2010 >seq22955 Length=9686 Score = 143 bits (158), Expect = 2e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || |||| || ||||||||||| || || Sbjct 7961 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 8020 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||||||| | | Sbjct 8021 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 8080 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || |||||||| || || || | |||||||| |||||||| | || || || Sbjct 8081 CTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 8140 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 8141 GAAGATCTGCAT 8152 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| ||||| | || || |||| || ||||||||||| || || Sbjct 8189 CTCCTTTTGGATGTTGTAGTCGGCAAGCGTACGACCGTCCTCAAGCTGCTTACCGGCGAA 8248 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||||| | Sbjct 8249 GATAAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 8308 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || |||||||| || || || | || || || ||||| |||||||| || || Sbjct 8309 CTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGAC 8368 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 8369 GAAGATCTGCAT 8380 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | || || |||| || |||||||| || || || Sbjct 8417 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 8476 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||||||||||| | Sbjct 8477 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 8536 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | | |||||| |||| || ||||| | ||||| || || || || | || || Sbjct 8537 TTCGATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 8593 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 8594 CACGAAGATCTGCAT 8608 Score = 116 bits (128), Expect = 3e-21 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || |||| || |||||||| || || || Sbjct 7698 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 7757 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| ||||||||| || | | Sbjct 7758 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGTTTAACGTT 7817 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || |||||||| || ||||| | |||||||| || || ||||| || || Sbjct 7818 CTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAAGGTCTT 7874 >seq23826 Length=10614 Score = 140 bits (154), Expect = 3e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||||||||| || Sbjct 8712 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCAAGCTGCTTACCCGCGAA 8653 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||||||| | Sbjct 8652 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 8593 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || |||||||| || || || | || || || ||||| |||||||| || || Sbjct 8592 CTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCAGTCAAAGTCTTGAC 8533 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 8532 GAAGATCTGCAT 8521 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||||||||| || Sbjct 8940 CTCCTTCTGTATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAA 8881 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||||||||||| | Sbjct 8880 GATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 8821 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | |||||||| || || || | || ||||| Sbjct 8820 CTCAATAGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCAC 8761 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 8760 GAAGATCTGCAT 8749 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | || || |||| || |||||||||||||| || Sbjct 8484 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 8425 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | |||| | |||||||||| |||||||||||||| | Sbjct 8424 GATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 8365 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || || ||||| | |||||||| || || || | || ||||| Sbjct 8364 TTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCAC 8305 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 8304 GAAGATCTGCAT 8293 >seq24030 Length=66970 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| || |||| ||| || |||| || |||||||| || || || Sbjct 65999 CTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 66058 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||||| | Sbjct 66059 GATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 66118 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| ||||| || || || || | |||||||| || || ||||| || || || Sbjct 66119 CTCGATCGTATCGCTAGACTCGACTTCGAGGGTGATCGTCTTGCCAGTCAAGGTCTTGAC 66178 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 66179 GAAGATCTGCAT 66190 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || |||| || ||||||||||| || || Sbjct 66455 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCAAGCTGCTTACCAGCGAA 66514 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||||| | Sbjct 66515 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 66574 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| ||||| || || ||||| | || || || || || ||||| || || || Sbjct 66575 CTCGATCGTATCGCTAGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAAGGTCTTGAC 66634 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 66635 GAAGATCTGCAT 66646 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || |||| || |||||||| || || || Sbjct 66227 CTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 66286 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||||| | Sbjct 66287 GATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 66346 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| || || ||||| | ||||| || || || || | || || || Sbjct 66347 TTCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 66406 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 66407 GAAGATCTGCAT 66418 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| ||||||| ||| || |||| || |||||||| || || || Sbjct 66865 CTCCTTTTGAATGTTGTAGTCGGCCAGGGTACGGCCGTCTTCGAGCTGCTTGCCAGCGAA 66924 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATC 35650 || | ||||||||||| | |||| | |||||||||| |||| Sbjct 66925 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATC 66970 Score = 86.0 bits (94), Expect = 6e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 35635 CTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCAC 35694 |||||||||| |||||| ||||||| | | | |||||||||||| || ||||| | Sbjct 66727 CTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCAACCTCAAG 66786 Query 35695 CGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || ||||||||||| || || || || |||||||| Sbjct 66787 GGTGATGGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 66828 >seq22211 Length=15201 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| ||||||| || || |||| || |||||||| || || || Sbjct 4394 CTCCTTTTGAATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGCTTGCCGGCGAA 4335 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||||||| ||||| ||||||| | Sbjct 4334 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 4275 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || |||||||| || || || | || || || ||||| |||||||| || || Sbjct 4274 CTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGAC 4215 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 4214 GAAGATCTGCAT 4203 Score = 127 bits (140), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || |||| || ||||||||||| || || Sbjct 4166 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 4107 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||||||||||| | Sbjct 4106 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 4047 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | | ||||| |||| || ||||| | |||||||| || || || | || || Sbjct 4046 TTCGATGGTGTCCGAGCTC---TCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTT 3990 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 3989 AACGAAGATCTGCAT 3975 Score = 127 bits (140), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || || |||| || |||||||||||||| || Sbjct 4622 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGCTTACCCGCGAA 4563 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||||||| |||||||||||||| | Sbjct 4562 GATAAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 4503 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || |||| || ||||| | |||||||| ||||| || | || || Sbjct 4502 CTCGATGGTATCCGAGCTC---TCGACCTCGAGGGTGATCGTCTTACCGGTAAGGGTCTT 4446 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 4445 CACGAAGATCTGCAT 4431 >seq18924 Length=24070 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || |||| || ||||||||||| || || Sbjct 17795 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAA 17854 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||||||||||| | Sbjct 17855 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 17914 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || |||||||| || || || | ||| || || |||||||| | || || || Sbjct 17915 CTCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTACCCGTGAGGGTCTTGAC 17974 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 17975 GAAGATCTGCAT 17986 Score = 129 bits (142), Expect = 5e-25 Identities = 169/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || |||||||| | | | ||| | || | ||| |||||| || |||||||| ||| Sbjct 17529 TTGCCACCACGCAGGCGAAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCG 17588 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 || | ||| || |||| || ||||||||||| || || || | ||||||||||| | | Sbjct 17589 GCGAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGA 17648 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGAT 35683 |||| | |||||||||| |||||| ||||||| | | | |||||| |||| Sbjct 17649 GGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCCGAGCTC--- 17705 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | |||||||| || || |||||||| || || || |||||||| Sbjct 17706 TCGACTTCGAGGGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 17758 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || ||||||||||| || || Sbjct 18023 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAA 18082 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || ||||||||| |||||||||||||| | Sbjct 18083 GATGAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTT 18142 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||| || || ||||| | ||||| || || || || | || ||||| Sbjct 18143 CTCGATCGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTCAC 18202 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 18203 GAAGATCTGCAT 18214 >seq23480 Length=26370 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | || || |||| || ||||||||||| || || Sbjct 12589 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCAAGCTGCTTACCGGCGAA 12648 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||||||| | | Sbjct 12649 GATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 12708 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || |||||||| || || || | ||||| || |||||||| | || || || Sbjct 12709 CTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGAC 12768 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 12769 GAAGATCTGCAT 12780 Score = 116 bits (128), Expect = 3e-21 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||| || || || Sbjct 12817 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 12876 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || ||||||||| |||||| ||||||| | Sbjct 12877 GATGAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTT 12936 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || |||||||| || ||||| | |||||||| || || ||||| || || Sbjct 12937 CTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAAGGTCTT 12993 Score = 105 bits (116), Expect = 6e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | || || |||| || |||||||||||||| || Sbjct 13271 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 13330 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | |||| | |||||||||| |||||||||||||| | Sbjct 13331 GATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 13390 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || |||| || ||||| | ||||| || || || || | || || Sbjct 13391 CTCGATGGTATCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 13447 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 13448 CACGAAGATCTGCAT 13462 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 35614 CTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGT 35673 ||||||||| | |||| | |||||||||| |||||||||||||| | | | || Sbjct 13112 CTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCAATAGT 13171 Query 35674 GTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTG 35733 ||||||||| |||||||| | ||||| || || || || | || || || || ||||| Sbjct 13172 GTCGCTCGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 13231 Query 35734 CAT 35736 ||| Sbjct 13232 CAT 13234 >seq23603 Length=18425 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || ||||||||||| || || Sbjct 63 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 122 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||||||| |||||||||||||| | Sbjct 123 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 182 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | || || || |||||||| | || || || Sbjct 183 CTCGATCGTGTCAGAGGACTCGACCTCGAGAGTAATGGTCTTACCCGTGAGGGTCTTGAC 242 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 243 GAAGATCTGCAT 254 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || |||| || |||||||| || || || Sbjct 291 CTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 350 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||||||| |||||||||||||| | Sbjct 351 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 410 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || |||||||| | || ||||| Sbjct 411 CTCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCAC 470 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 471 GAAGATCTGCAT 482 >seq18730 Length=7279 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| || |||| || ||||||||||| || || Sbjct 315 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 256 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||||||||||| | Sbjct 255 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 196 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || |||||||| || || || | ||| || || || ||||| | || || || Sbjct 195 CTCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTGAC 136 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 135 GAAGATCTGCAT 124 >seq11646 Length=142 Score = 105 bits (116), Expect = 6e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||||||||| || Sbjct 13 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCAAGCTGCTTACCCGCGAA 72 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCA 35660 || | ||||||||||| | |||| | |||||||||| |||||||||||||| Sbjct 73 GATAAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCA 128 >seq4610 Length=127 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 35612 CGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC 35671 ||||||||||| | |||| | |||||||||| |||||||||||||| || | | | Sbjct 11 CGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTTTCGATC 70 Query 35672 GTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 ||||||||||| || ||||| | |||||||| || || ||||| || || || || Sbjct 71 GTGTCGCTCGACTCAACCTCAAGGGTGATCGTCTTGCCAGTCAAGGTCTTGACGAA 126 >seq21130 Length=4525 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTG 35674 |||||||| | ||| | || ||||||||| |||||||||||||| | | | |||| Sbjct 1 TGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATCGTG 60 Query 35675 TCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 35734 |||||||| || ||||| | ||||| || || || || | || ||||| || |||||| Sbjct 61 TCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGC 120 Query 35735 AT 35736 || Sbjct 121 AT 122 >seq16600 Length=130 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || |||| || |||||||| || || || Sbjct 106 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCTTCGAGCTGCTTGCCAGCGAA 47 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATC 35650 || | ||||||||||| | ||| | || ||||||||| |||| Sbjct 46 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450657809697840