Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq19361 268 1e-66 seq23003 260 2e-64 seq23741 159 4e-34 seq23882 111 2e-19 seq20001 107 2e-18 >seq19361 Length=29087 Score = 268 bits (296), Expect = 1e-66 Identities = 695/1046 (66%), Gaps = 29/1046 (3%) Strand=Plus/Plus Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577 || || || || || ||||| || ||||| || || || ||||| || | ||| || || Sbjct 13981 ATGAAGACGTCGGCAAGACCCTGAACACCAAGACCGATCGGGCGGTGACGCATGTTCGAG 14040 Query 118578 TTCCGAGCGGTCTCCACG---GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634 || || || ||| | | ||||| | || | ||||| ||| | || || || Sbjct 14041 TTGCGGGC---CTCAATGACTGGATAGTAGTTGATGTCGATCACCTTGTTGAGGTTGCGC 14097 Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 118694 ||||| ||||| | || |||||| | || ||| || ||| || | | | Sbjct 14098 GTGACGACCTTGACCACGTCGAAAAGCTTCTTGTGATCGAA-CTGGCCGT----TGAC-G 14151 Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 || ||||| ||||| |||| ||||| || || ||||| | | |||||| | ||| Sbjct 14152 ACGTACTTCGGAAGAGCGAGCGACGCGAGGTTGCACACTGCGACCTCATCAGGAGACGTG 14211 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||| || | |||||||||||||| || || |||||||| | || || || || Sbjct 14212 AACTGAATGACCTCCGTGCACAAGTTCGAGGACTGGATGGTGCCGAGGTGCTGCTGGTTC 14271 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||||| | || |||| ||||||||||| ||||| ||||| || ||||| | || || Sbjct 14272 GACTTGGCATTGCACGAGTCCTTGTAAAGGATGTAAGGCGTGCCGGTCTCGATCTGTGAT 14331 Query 118875 TTGAGAATAGCCTTCCAGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932 | |||||| | ||| | || || || | | |||| || || ||||| | Sbjct 14332 TCGAGAATGGAGAACCACAGCTCCTGGGCCTTGACGACGCGGCGA--GCGCGTCCCTCAT 14389 Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992 |||||| ||| |||| ||||| |||||| | ||| |||| || || | Sbjct 14390 TCTCGTAGCGCACGTACTTCTCTTCGAACTCCTCACCCCAGCACTCGAAGAGGCCGGGCG 14449 Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052 | | | || |||||||| ||||| | || || ||||||| ||||||||||| |||| Sbjct 14450 CTTCGTTGGGACAGAAGAGCGACCAATCGCCTCCGGCCTCAACGCGCTTCATGAACAGGT 14509 Query 119053 CTGGGATCCAGAGCGCCG-AGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGAT 119109 | || | ||| || |||| |||||||||| || |||| | |||| || | || || | Sbjct 14510 CCGGCACCCACAG-GCCGTAGAAGAGATCACG--AGCGCGGTTCTCCTCCTTGCCATGGT 14566 Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169 | | ||| | || || | |||||| ||||||||||| ||||| || | ||||| Sbjct 14567 TCTTCTTGAGCTCAAGGAAATCGAAGATATCGGCGTGCCACGGCTCCAGATAGATCGCGA 14626 Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226 | |||||||| | ||| |||| | || || | || || |||| | |||| Sbjct 14627 ACGCTCCCTTACGCTTGCCACCGCCCTGATCAACGTAGCGAGCGGTATCGTTGTAGACAC 14686 Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATT 119284 ||||||| || |||| |||| || || || || || || | |||||| || Sbjct 14687 GAAGCATGGGGATGAGTCCATTCGACGTTCCGTTGGTGCCGCGGATGTACGAG--TTCGA 14744 Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 || | || ||| | | | ||||| || || || |||| ||||| | ||||| Sbjct 14745 AGCGCGGATGCGGTGAACGGCAACTCCAATGCCACCGGCAGACTTGGAGATGAGAGCGCA 14804 Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 || | |||| || ||||||| || ||||| ||||| |||| | | || |||||||| Sbjct 14805 CTGCTTGAGCGTGTCGTAGATGCCCTCGATGGAGTCCTCCTTCATCGTGAGCAGGAAGCA 14864 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 ||||| || || | || || || |||||||||||||| || || ||||| |||| Sbjct 14865 CGACGACAGCTGCGGACGAGGCGTGCCCGCGTTGAAGAGAGTAGGAGTGGCGTGCGTGAA 14924 Query 119465 CATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAAT 119524 | || || | ||||| ||||||| |||||||| |||| ||| ||||| Sbjct 14925 GAGCTGCTGCGAGAGGAGATCGTATGTCTCCAGCACGGCGGGGATGTTGTCCGTGTGAAG 14984 Query 119525 ACCGATCGAGACCCGCATAAACATGT 119550 |||| | ||||| ||| | ||||| Sbjct 14985 GCCGACGGCGACCCTCATGAGCATGT 15010 Score = 95.1 bits (104), Expect = 1e-14 Identities = 291/449 (65%), Gaps = 6/449 (1%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| |||| ||| || || | ||||| || | Sbjct 13300 CGAAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTG 13359 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||||| || || || | ||||| ||| ||| | ||| || |||||| | Sbjct 13360 AGCTTGGCGAAGGAAGGCTCTCCCATGTAGATGTTGAGCGACTGGCTCTGGTCGATGTAT 13419 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 || || || ||||| || || || | | | || |||||||||||| || Sbjct 13420 GCAGAGCGGTCGGCGGCCATGTCGATGACGACGCGCTGCGGAATCTCCCACACAGTCTTG 13479 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || || ||||| | ||||| ||||| || |||| || || | ||| || | | Sbjct 13480 TACAGCTTCTTGAGGTCATCAGGGATCTCGTCGATGTTCTGCACGGAGCCGTTG---TGG 13536 Query 118077 ACCATGAGATCCTTCATAT---CCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 ||| ||| | ||| || | ||||| | || || | || || | | Sbjct 13537 GCCACGAGTTTGTTCTTAAGGGCGGCCGACCACAAGCCTCGCTCCATCAGGTCGCGGAGG 13596 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || |||| ||||| || || || ||||| || |||| | ||||| |||| Sbjct 13597 AGGTGCTCGTTGACGACGGTGAAGTCGCCCGCAAGAATGCGACGTGTGTAGATGTTGGAG 13656 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| ||||| |||||||| ||||| || | || || | ||||| ||||| |||||| Sbjct 13657 GTGTACGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGAGAGGTGGATGCTGTAGGCATG 13716 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACC 118282 ||||||| ||| ||| ||| | ||| || Sbjct 13717 GGTGCCACGAGGAGGGAGTTCCTGAGGCC 13745 >seq23003 Length=12893 Score = 260 bits (288), Expect = 2e-64 Identities = 1152/1806 (64%), Gaps = 41/1806 (2%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| || |||||||| |||| ||| || || | ||||| || | Sbjct 2373 CGGAGGTAGTACATGCCAGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTG 2314 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||||| || || || ||||| ||| ||| | ||| ||||||||| | Sbjct 2313 AGCTTGGCGAAGGAAGGCTCGCCCATGTAGATGTTGAGGGACTGGCTCTGATCGATGTAC 2254 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 ||||| || ||||| || || || | | | || |||||||||||| || Sbjct 2253 GCAGAGCGATCGGCAGCCATGTCGATGACTACGCGCTGCGGAATCTCCCACACAGTCTTG 2194 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || || ||||| | |||||| ||||| || |||| || || | || || | || Sbjct 2193 TACAGCTTCTTGAGATCATCGGGGATCTCGTCGATGTTCTGCACTGAGCC----GTTGTG 2138 Query 118077 ACC-ATGAGATCCTTCATAT---CCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 | | | ||| | ||| | | ||||| | || || | || || | Sbjct 2137 AGCGACGAGTTTGTTCTTGAGGGCGGCCGACCACAAGCCTCGCTCCATCAGGTCGCGGAG 2078 Query 118133 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 118192 ||| |||| ||||| || || || || || || |||| | |||||||||| Sbjct 2077 GAGGTGCTCGTTGACGACGGTGAAGTCGCCGGCAAGAATGCGACGTGTGTAGATATTGGA 2018 Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 ||||| ||||| |||||||| ||||| || | || || | ||||| || || ||||| Sbjct 2017 GGTGTACGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGTGAGGTGGATGCCGTAGGCAT 1958 Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312 ||| |||| ||| ||| ||| | |||||| | | ||| | ||| | | Sbjct 1957 GGGCGCCACGAGGAGGGAGTTCCTGAGACCGTGCTGAGCGATGTTGGCACGGAGGGTAGC 1898 Query 118313 CCAGTCGTAGTTGAGCTTTG---TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 118369 |||||| | || | | | | ||| || | ||| ||||| | || | Sbjct 1897 CCAGTCCCACCTGTCCGAGGGAGTAACACCC---CAGAGATCGGGTTGGAGCTTGCCCTC 1841 Query 118370 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 118429 ||| || ||||| || || | || || | ||||| ||| |||| ||| | Sbjct 1840 GGAAGCCGGCGAGCCAGCATACGTAGGGTAGGTGCCCTGCTCCTGGGCCATCTCGTTGGA 1781 Query 118430 CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAAT-GCGAGCATTCATTGCCTTGGCCT 118488 || ||| || |||| || || || || || || ||| | ||| | | ||||| Sbjct 1780 AGCAGTGAGTGCGGCGTAGTAGATGGTCTCGAAGATAGCGCG-ATTGAGCTCGCGGGCCT 1722 Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548 | | | || | | | || | ||||| || || || ||||| || ||||| | Sbjct 1721 CCTGGCTCTCCCAGGGGCAGCGCATGAGCATAAAGACGTCGGCAAGACCCTGAACACCAA 1662 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAAT 118605 | || || || || || | ||| || || || || || ||| || || || | | Sbjct 1661 GACCGATCGGACGGTGGCGCATGTTCGAGTTGCGGGC---CTCAGGGACTGGGTAGTAGT 1605 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | | ||||| ||| | || || || |||||| || || | || | ||||| | Sbjct 1604 TGATGTCGATCACCTTGTTGAGGTTGCGGGTGACTACTTTGACCACGTCGTAGAGCTTCT 1545 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 || ||| || ||| || || | ||| ||||| ||||| |||| ||||| || | Sbjct 1544 TGTGATCGAA-CTG----TCCGTTGAC-GACGTACTTGGGAAGAGCGAGCGACGCGAGGT 1491 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | ||||||| | |||||| | ||||||| || | |||||||||||||| || Sbjct 1490 TGCACACAGCGACCTCATCAGGAGACGTGTACTGAATGACCTCCGTGCACAAGTTCGAGG 1431 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845 || |||||||| | || || || || ||||| | || |||| |||||| || || | Sbjct 1430 ACTGGATGGTGCCAAGGTGCTGCTGGTTCGACTTGGCATTGCACGAATCCTTATAGAGGA 1371 Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGC-- 118903 |||| ||||| || ||||| | || |||| |||||| | ||| | || || Sbjct 1370 TGTAAGGCGTGCCGGTCTCGATCTGCGACTCGAGAATGGAGAACCACAGCTCCTGGGCCT 1311 Query 118904 TGGC-ACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 118962 || | ||| |||| || || || || | |||||| ||| | || |||| Sbjct 1310 TGACGACAC-GGCGA--GCGCGGCCTTCGTTCTCGTAACGCACGTACTTCTCCTCGAACT 1254 Query 118963 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 119022 | || ||| | ||| |||| ||||| || | | ||||||||||| ||||| | | Sbjct 1253 CGTCGCCCCAGCACTCGAAGAGGCCTGGCGCTTCGTTGGGGCAGAAGAGCGACCAGTCGC 1194 Query 119023 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 119082 | || |||| || ||||||||||| ||||| || | ||| || | |||||||||| | Sbjct 1193 CTCCGGCCTCGACGCGCTTCATGAACAGGTCGGGCACCCACAGGCCATAGAAGAGATCAC 1134 Query 119083 GACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 || || | |||| || | || || || | ||| | || || | ||| || Sbjct 1133 GA--GCACGGTTCTCCTCCTTGCCATGGTTCTTCTTGAGCTCAAGGAAATCGAAGATGTC 1076 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTT 119197 ||||||||||| ||||| || | ||||| | ||||| || | ||| |||| | Sbjct 1075 GGCGTGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTGCGCTTGCCACCGCCCTGATC 1016 Query 119198 TACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCC 119257 || || | || || |||| | ||||| ||||| || |||| || | |||| || Sbjct 1015 AACGTAGCGAGCGGTATCGTTGTAAACACGGAGCATGGGGATGAGTCCGTTGGATGTTCC 956 Query 119258 ATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACC 119317 || || || || || || || || | || ||||| | | |||||| || Sbjct 955 GTTGGTGCCGCGGATGTAGGAGTTCGAAGCGCGGATGCGGTGGACGGCAACACCAATGCC 896 Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377 ||||| |||| ||||| | ||||||| | |||| || ||||||| || ||||| || Sbjct 895 ACCTGCGGACTTGGAGATGAGAGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATGGA 836 Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTT 119437 ||| |||| | | || |||||||| ||| | || || | || || || ||||| Sbjct 835 GTCCTCCTTCATCGTGAGCAGGAAGCACGACGAGAGCTGCGGACGAGGCGTGCCCGCGTT 776 Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAA 119497 ||||||||| || || ||||| |||| | || || | ||| |||||||||| Sbjct 775 GAAGAGAGTAGGAGTGGCGTGCGTGAAGAGCTGCTGAGAAAGGAGGTCATAGGTCTCCAG 716 Query 119498 GACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 |||||||| |||| ||| ||||| || | | ||||| ||| | ||||| || || Sbjct 715 CACGGCGGGGATGTTGTCCTTGTGAAGGCCCACGGCGACCCTCATGAGCATGTGCTGCGG 656 Query 119558 TGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACC 119617 |||| | || || |||| | | |||||| || | |||||||| ||| Sbjct 655 CCGCTCCACGATGACTCCGTCGATCTTGAAGAGGTACGAGCGTTCGAGGGTCTTGAAACC 596 Query 119618 AAAATA 119623 ||| || Sbjct 595 AAAGTA 590 >seq23741 Length=113318 Score = 159 bits (176), Expect = 4e-34 Identities = 282/403 (70%), Gaps = 25/403 (6%) Strand=Plus/Minus Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 ||| |||||||| | ||| |||| ||||||| |||| | || |||||| ||||| Sbjct 78499 GAGCAGACGATCGGCGACAAACTCGATGTACTGGCACATGAGGTTGGCGTTCATGCCGAT 78440 Query 129898 GAG-GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCA 129956 ||| | || ||||||| || || |||| |||||||||| || || || ||| | | Sbjct 78439 GAGCGCGACG-GGGAGCGACTCAGTGACGAACTCCTTCTCAATCTCGACGGCCTCCAGGA 78381 Query 129957 CGATGGCGTGAATGGTCTCCGTGCCAGGTC----TATTGC---GCAAAGTCTTGAAGAGT 130009 ||| || ||| | | || | ||||| | ||| ||| | | || ||| Sbjct 78380 TGATC---TGCTTGGGCAC-GTCCGAGGTCGGCTTGTTGACGAGCATGCTGTAGAGGAGG 78325 Query 130010 TCCACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCAC 130069 || | |||| || ||| |||||||| || ||| |||||| || ||||||||| Sbjct 78324 --CAAG-CAAAGTCGCAGTGAAGACCCTCATCGCGGCTGATGAGCTCGTTCGAGAAGGCA 78268 Query 130070 AGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAG 130129 ||||| |||||||| || |||||||| | |||||| || || || || |||||||||||| Sbjct 78267 AGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCAGAGAAG 78208 Query 130130 AAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG------AGCGGGAC 130183 ||||| ||||| ||| ||||| | | |||||||| ||||||| || | | Sbjct 78207 AAGATGCCCTCGACAGCGGCGAAGCCGACCAGACGCTCCGCAAAGGTCTCGACGCCGTCC 78148 Query 130184 TTTGTATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGA 130226 || | ||| |||||||| ||||||| |||||| |||| || Sbjct 78147 TTGG---CAATCCACTTCAGGGCCCACTCCGCCTTCTTCTTGA 78108 >seq23882 Length=50760 Score = 111 bits (122), Expect = 2e-19 Identities = 210/304 (69%), Gaps = 4/304 (1%) Strand=Plus/Minus Query 32130 GACATCTCAACTACGAGCTTCTATGCGAGCCACGTCATCACAGCGGGTGGCGTTGGTGGC 32189 |||||| | || || || ||||| ||| ||||||||||| || | ||| || ||| Sbjct 21377 GACATCGCCACGACCAGTTTCTACGCGTCTCACGTCATCACGGCCTGCGGCTCCGGGGGC 21318 Query 32190 ATGGTCATGTTCAATGACGATGAGCACCTTAAGCGGGCTCTCATGTTTAGGGATTGGGGG 32249 |||||||||||||| || |||| || ||||| || ||||| | | || ||||| Sbjct 21317 ATGGTCATGTTCAACTCGGACAAGCAGCTCAAGCGTGCCACCATGTATCGTGACTGGGGA 21258 Query 32250 CGTATCGGTGACAATATTGAGGAGCCAAGTGAACGCTTCAACCACTCCGTTGATGGTATC 32309 || ||||| ||||| ||| || |||||||||| | || || || ||| Sbjct 21257 CGGATCGGCGACAACTCGGAGAAGGTGGAGGAACGCTTCACTGAGCAGGTGGACGGAATC 21198 Query 32310 CCCTACGACTGGAAGTTCCTCTATGGTGTCGCCGGG-TATCACCTCAAG-GCATGTGAGA 32367 |||||| |||||||| ||||| || || ||| || || ||||| ||| | ||| Sbjct 21197 GTATACGACACCAAGTTCCTGTATGGCGT-GCTGGGCTACAACTTCAAGAGCA-GCGAGG 21140 Query 32368 TGAATGCCGCATTTGGTCTCGTCCAATTGGATAAGTTGGAGGGGTTCCTTGCCACTCGAC 32427 | || ||||| ||||| || ||||| | ||| | | ||| || || |||||||| | Sbjct 21139 TCAACGCCGCGTTTGGACTTGTCCAGCTCGATCGCCTAGCGGGCTTTCTCGCCACTCGTC 21080 Query 32428 GTCA 32431 | || Sbjct 21079 GACA 21076 >seq20001 Length=20085 Score = 107 bits (118), Expect = 2e-18 Identities = 514/806 (64%), Gaps = 52/806 (6%) Strand=Plus/Minus Query 31634 CAAGAAAGTGTGGTATGCGCCCAACAAATTTGAATCATATGGGGAGGAAGAAATTAAAGC 31693 |||||| || | || || ||||| |||||| | || || ||| |||| || |||| Sbjct 4026 CAAGAAGGTCTACTACGCCGCCAACGGCTTTGAAGCTTACGGTGAGCAAGAGATCCAAGC 3967 Query 31694 CGTTGAGGCTTGCCTTCGCGATGGCTGGCTCGCTGGCTTTGGT-GAT-CGCTCTGTGGAA 31751 |||| ||| |||| | ||| || ||||||||||||||||| | | | | | | | Sbjct 3966 CGTTCAGGATTGCTTGCGCAGCGGATGGCTCGCTGGCTTTGGAAGCTACACGCAGCGT-- 3909 Query 31752 TTTGAGAAGAGAGTGGCTGACATATTCGGAAAGAGACACGGACTCTTTGTAAACTCTGGA 31811 ||||||| | || || ||| | ||| |||||| ||||| |||||||| ||||| || Sbjct 3908 TTTGAGAGCCGCGTCGCCGACCTGTTCAGAAAGAAGCACGGCCTCTTTGTGAACTCGGGC 3849 Query 31812 AGTAGTGCGATCCTTTTGGGGCTCTGTGCCCTTAATCTCCCAAAGGGCTCCGAGGTTGTG 31871 || | ||| ||| || || || | || || ||||| || || Sbjct 3848 TCCTCGGCCAACCTGCTGGCCCTGGCGGCGCTCGACCTGCCGGCTGGCTCGCGCGTGTTG 3789 Query 31872 ACACCTGCGTGTGGATTTGCGACGACAGTGGCACCCCTTCTACAATTGGGTCTCAAACCG 31931 || || || ||| || || ||||| ||||| ||| | || || | || ||| | || Sbjct 3788 ACGCCGGCCTGTACGTTCGCAACGACCGTGGCCCCCATCCTGCAGCTCGGACTCGAGCCT 3729 Query 31932 GTGTTCTGT-GATGTGGGTCTGAGGTCATATGTTCCAAATGTTGAGCAGTTGAGGGGGGT 31990 ||||| ||| || || | || | | || || || || |||| | | | | || Sbjct 3728 GTGTT-TGTCGACGTTGAGCTTGCGACGTACGTCCCGTCGGTGGAGCGCGTCATGAGCGT 3670 Query 31991 TGTCACCCCGGAC----ACAA-------AATGT-ATCCTGCTTCCCAATCTCATTGGGAA 32038 || || | ||| |||| || || ||| |||| ||||| || |||| || Sbjct 3669 GGTGGCCGCCGACGCCGACAAGGCCATCAAGGTCATCATGCTGCCCAACCTGGTTGGCAA 3610 Query 32039 TGTCCCCGATTGGGAGGCCATTCGCGAAGCCTTCCCCGGGG-TGACC------------- 32084 || || |||||| || | | | | |||| || | | | || || Sbjct 3609 CGTGCCTGATTGGCCGGGCCTGAGGGCAGCCCTCACGGCAGCTGGCCGCAGCGAGATTGT 3550 Query 32085 -CTCTTTGAAGATTCCGCGGATACCATC----------ACGAAG--ACTGGGTGTACG-- 32129 ||| | || || || || || |||||| |||| | || || || | Sbjct 3549 GCTCATCGAGGACTCAGCCGACACCATCCCGCACTACGACGACGCCACCGGCTGCTCCTC 3490 Query 32130 -GACATCTCAACTACGAGCTTCTATGCGAGCCACGTCATCACAGCGGGTGGCGTTGGTGG 32188 |||||| | || || |||||||| ||| |||||||||||| || | ||| || || Sbjct 3489 CGACATCGCCACGACCAGCTTCTACGCGTCCCACGTCATCACGGCCTGCGGCTCAGGCGG 3430 Query 32189 CATGGTCATGTTCAATGACGATGAGCACCTTAAGCGGGCTCTCATGTTTAGGGATTGGGG 32248 ||||||||||||||| || | ||| || ||||| ||| |||||| | || ||||| Sbjct 3429 CATGGTCATGTTCAACTCGGAGGCGCAGCTCAAGCGTGCTACCATGTTCCGTGACTGGGG 3370 Query 32249 GCGTATCGGTGACAATATTGAGGAGCCAAGTGAACGCTTCAACCACTCCGTTGATGGTAT 32308 || ||||| ||||| ||| || || ||||||| | | || || || || Sbjct 3369 ACGGATCGGCGACAACTCGGAGAAGGTGGAGGAGCGCTTCACCGAGCAAGTGGACGGAAT 3310 Query 32309 CCCCTACGACTGGAAGTTCCTCTATGGTGTCGCCGGG-TATCACCTCAAG-GCATGTGAG 32366 || ||| |||||||| ||||| || || ||| || || ||||| ||| | ||| Sbjct 3309 TGTGTATGACACCAAGTTCCTGTATGGCGT-GCTGGGCTACAACTTCAAGAGCA-GCGAG 3252 Query 32367 ATGAATGCCGCATTTGGTCTCGTCCA 32392 | || || || ||||| || ||||| Sbjct 3251 GTCAACGCAGCGTTTGGACTTGTCCA 3226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618248911856880