Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq19361 495 4e-135 seq23003 428 5e-115 seq23741 156 5e-33 >seq19361 Length=29087 Score = 495 bits (548), Expect = 4e-135 Identities = 1174/1739 (68%), Gaps = 61/1739 (4%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| |||||||| ||||| ||| |||| | |||||| | |||||| Sbjct 13306 TAGTACATGCCGGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTGAGCTTG 13365 Query 78259 GCCAGACTCGGGTTCTCC-ATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACC 78317 || | | || ||||| ||| ||||||||||||||||| |||||||||||| ||| Sbjct 13366 GCGA-AGGAAGGCTCTCCCATGTAGATGTTGAGCGACTGGCTCTGGTCGATGTATGCAGA 13424 Query 78318 GCGGTCGGCCGCCATGTCGATGACCGACTTT-TGCGGAATCTCCCAGATGGTCCGGTAAA 78376 ||||||||| |||||||||||||| ||| |||||||||||||| | ||| ||| | Sbjct 13425 GCGGTCGGCGGCCATGTCGATGAC-GACGCGCTGCGGAATCTCCCACACAGTCTTGTACA 13483 Query 78377 TGGCCTTCAGCTCTTCCTGGATGTC--CAGCGCT-TGTACGCTCCCACCGGCTCGCACAA 78433 ||| || || || |||| || | | | || ||| || | ||| | Sbjct 13484 GCTTCTTGAGGTCATCAGGGATCTCGTCGATGTTCTGCACGGAGCCGTTGTGGGCCACGA 13543 Query 78434 TTTCATTCTTAATTTGAGGGTTCCAGCGA---TTGATCTTCTGAAGATCCCGGACCAGGT 78490 || ||||||| | ||| | | | | || | || || |||| |||| Sbjct 13544 GTTTGTTCTTAAGGGCGGCCGACCA-CAAGCCTCGCTC--CATCAGGTCGCGGAGGAGGT 13600 Query 78491 GCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGT 78550 || ||| | | | ||| ||||| || || | || || ||||||||||| |||| Sbjct 13601 GCTCGTTGACGACGGTGAAGTCGCCCGCAAGAATGCGACGTGTGTAGATGTTGGAGGTGT 13660 Query 78551 ACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTG 78610 |||||||||| ||||||||| || | ||||| | ||| || || || |||||||||| Sbjct 13661 ACGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGAGAGGTGGATGCTGTAGGCATGGGTG 13720 Query 78611 CGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGT 78664 | || || || || |||| || || ||| ||| | | | ||| | || Sbjct 13721 CCACGAGGAGGGAGTTCCTGAGGCCGTGCTGAGCGATGTTGGCACGGAGGGTAGCCCAGT 13780 Query 78665 CCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCG 78724 |||| || | | || ||||| | ||| || || || | |||||||| || | Sbjct 13781 CCCACCTGTCCGAGGGGGTAATGCCCCAGAGGTCGGGCTGGAGCTTGCCCTCGGAAGCTG 13840 Query 78725 GCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCG-AGC 78783 |||| ||| | | || ||||| |||| ||||||||| | || ||| | | || Sbjct 13841 GCGAGCCCGCGTATGTAGGGTAAGTACCCTGCTCCTTGGCCA--TCTCATTAGAAGCAGT 13898 Query 78784 -AGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCT--TGGTC 78840 || || |||| ||| | | ||||||||| | ||||||||||| |||| ||| | Sbjct 13899 GAGTGCAGCGTAGTAGATGGTCTCGAAGATAGCGCGATTGAGCTCGCGGGCCTCCTGG-C 13957 Query 78841 TCGTCGAACGAAAGGCCGAGCAT---CATGAAGACATCGGCCAGGCCCTGGACGCCGATA 78897 || || | | ||| | |||| ||||||||| ||||| || ||||| || || | | Sbjct 13958 TC-TCCCATG---GGCAGCGCATGAGCATGAAGACGTCGGCAAGACCCTGAACACCAAGA 14013 Query 78898 GCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGA 78957 ||||||| ||||| |||||||| || |||||| | | || || |||| Sbjct 14014 CCGATCGGGCGGTGACGCATGTTCGAGTTGCGGGCCTCAATGACTGGATAGTAGTTGATG 14073 Query 78958 TCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAA 79017 ||||| || ||| ||||| |||||||||||| ||| ||| | | || | | Sbjct 14074 TCGATCACCTTGTTGAGGTTGCGCGTGACGACCTTGACCACGTCGAAAAGCTTCTTGTGA 14133 Query 79018 TCAAAATGATTTCCTTTGATGA---AAGTCGGTAGGCACAGCGATGCCAGGTTGCACACG 79074 || || || || |||| || | |||| || ||||| || ||||||||||| Sbjct 14134 TCGAACTGG---CCGTTGACGACGTACTTCGGAAGAGCGAGCGACGCGAGGTTGCACACT 14190 Query 79075 GCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATG 79134 || ||| || || | | || |||| || |||||||| || || |||| |||| Sbjct 14191 GCGACCTCATCAGGAGACGTGAACTGAATGACCTCCGTGCACAAGTTCGAGGACTGGATG 14250 Query 79135 GTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGC 79194 ||||||| || || |||||| ||| | || || | ||||||||| ||||| ||| Sbjct 14251 GTGCCGAGGTGCTGCTGGTTCGACTTGGCATTGCACGAGTCCTTGTAAAGGATGTAAGGC 14310 Query 79195 GTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAAC- 79253 || |||||||| | ||| | ||||| | | ||| | ||| ||||| ||| || Sbjct 14311 GTGCCGGTCTCGATCTGTGATTCGAGAATGGAGAACCACAGCTCCTGGGCCTTGACGACG 14370 Query 79254 CTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATA 79313 | | | | | |||| |||| | |||| ||| | ||| |||| || | Sbjct 14371 CGGCGAGCGC-GTCCCTCATTCTCGTAGCGCACGTACTTCTCTTCGAACTCCTCACCCCA 14429 Query 79314 GACATCGGGCAGGCCCGGGCACT-CGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCT 79372 | ||| ||||| |||| || ||| || || | || ||| || | | || Sbjct 14430 GCACTCGAAGAGGCC-GGGCGCTTCGTTGGGACAGAAGAGCGACCAATCGCCTCCGGCCT 14488 Query 79373 CAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT-GAAGAGGTCGCGGCAACGC 79431 |||| || |||||| |||||||| | ||||||| |||| |||||| || || || Sbjct 14489 CAACGCGCTTCATGAACAGGTCCGGCACCCACAGG-CCGTAGAAGAGATCACGAGCGCGG 14547 Query 79432 ATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCAC 79491 ||||||| | ||| |||||| ||||| || || || | ||| |||||||||||| Sbjct 14548 TTCTCCTCCTTGCCATGGTTCTTCTTGAGCTCAAGGAAATCGAAGATATCGGCGTGCCAC 14607 Query 79492 GGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGG 79551 |||||||||||||| ||||||| ||||| |||||||| |||||||| | ||||| || Sbjct 14608 GGCTCCAGATAGATCGCGAACGCTCCCTTACGCTTGCCACCGCCCTGATCAACGTAGCGA 14667 Query 79552 GCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACG--CCGTTCGTCC 79609 || || | |||| | || || |||||||| | || || | ||||| ||||| || | Sbjct 14668 GCGGTATCGTTGTAGACACGAAGCATGGGGATGAGTCCATT--CGACGTTCCGTTGGTGC 14725 Query 79610 CGTTGATTCGTGTACC-GCTCG---CCCGAATGTTCGAGCAGTGG--ATTCCGATGCCCC 79663 || ||| |||| | ||| | || ||| || | || | ||| ||||| | Sbjct 14726 CGCGGAT----GTACGAGTTCGAAGCGCGGATG--CGGTGAACGGCAACTCCAATGCCAC 14779 Query 79664 CGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGT 79723 ||| ||||||||||| | ||||||| ||||||||| ||||||||||||||||| |||| Sbjct 14780 CGGCAGACTTGGAGATGAGAGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATGGAGT 14839 Query 79724 CGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGA 79783 | |||||||| | || ||||||||| ||||| ||| || ||| || ||||||| Sbjct 14840 CCTCCTTCATCGTGAGCAGGAAGCACGACGACAGCTGCGGACGAGGCGTGCCCGCGTTGA 14899 Query 79784 AGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGA 79843 |||| || || || ||||||||||||| || || | |||||||| |||||| | Sbjct 14900 AGAGAGTAGGAGTGGCGTGCGTGAAGAGCTGCTGCGAGAGGAGATCGTATGTCTCCAGCA 14959 Query 79844 CGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGC 79902 || |||| || ||| ||| | |||||| ||||| | ||||| | || ||| ||| Sbjct 14960 CGGCGGGGATGTTGTCCGTGTGAAGGCCGACGGCGACCCTCATGAGCATGTGCTGCGGC 15018 Score = 477 bits (528), Expect = 1e-129 Identities = 1164/1741 (67%), Gaps = 41/1741 (2%) Strand=Plus/Minus Query 19102 GCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGT 19161 ||| ||| || | ||||| | ||||| |||||| | || ||| || |||| || Sbjct 15018 GCCGCAGCACATGCTCATGAGGGTCGCCGTCGGCCTTCACACGGACAACATCCCCGCCGT 14959 Query 19162 CCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 | ||||||||||| || | ||| || ||||||||||||| || || || || || Sbjct 14958 GCTGGAGACATACGATCTCCTCTCGCAGCAGCTCTTCACGCACGCCACTCCTACTCTCTT 14899 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 |||||| || ||| |||||| ||||| || ||||| | | |||||||| || Sbjct 14898 CAACGCGGGCACGCCTCGTCCGCAGCTGTCGTCGTGCTTCCTGCTCACGATGAAGGAGGA 14839 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 | ||| |||||||||||||| ||||||||| ||||||| | ||||||||||| |||| Sbjct 14838 CTCCATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCTCTCATCTCCAAGTCTGCCGG 14779 Query 19342 GGGTATCGG-GATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAA--TCAATGGGAC 19398 || || || | | | | | | ||||| || | | || || | || || || Sbjct 14778 TGGCATTGGAGTTGCCGTTCACCGC-ATCCG--CGCTTCGAACTCGTACATCCGCGGCAC 14722 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 |||||| | | || || |||| ||||| || |||| |||| | || || | || Sbjct 14721 CAACGGAACGTCGAATGGACTCATCCCCATGCTTCGTGTCTACAACGATACCGCTCGCTA 14662 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 ||| | ||||| || ||||| || ||||| ||||||| ||||| || ||||| ||||| Sbjct 14661 CGTTGATCAGGGCGGTGGCAAGCGTAAGGGAGCGTTCGCGATCTATCTGGAGCCGTGGCA 14602 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 ||| || || | |||||||| || || |||||| || | ||||||| ||| Sbjct 14601 CGCCGATATCTTCGATTTCCTTGAGCTCAAGAAGAACCATGGCAAGGAGGAGAACCGCGC 14542 Query 19579 TCGCGACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGG 19637 ||| || |||||| ||||||| |||| | |||||||| |||||| || |||||| | Sbjct 14541 TCGTGATCTCTTCTACGGCCT-GTGGGTGCCGGACCTGTTCATGAAGCGCGTTGAGGCCG 14483 Query 19638 ACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCG 19697 | || ||| || | || || ||||| || ||||| ||| || || | Sbjct 14482 GAGGCGATTGGTCGCTCTTCTGTCCCAACGAAGCGCCCGGCCTCTTCGAGTGCTGGGGTG 14423 Query 19698 AGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAG-GTGGT 19755 ||| |||| | ||| |||| | |||| |||| || | || | | || || Sbjct 14422 AGGAGTTCGAAGAGAAGTACGTGCGCTACGAGAATGAGGGACGCGCTC--GCCGCGTCGT 14365 Query 19756 CCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTA 19815 | ||||| ||| | ||| | | | ||| || ||| ||||||||||||| || || Sbjct 14364 CAAGGCCCAGGAGCTGTGGTTCTCCATTCTCGAATCACAGATCGAGACCGGCACGCCTTA 14305 Query 19816 CATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAA 19875 ||| ||||||||| | || |||||||| || ||| || || ||||| | ||| | Sbjct 14304 CATCCTTTACAAGGACTCGTGCAATGCCAAGTCGAACCAGCAGCACCTCGGCACCATCCA 14245 Query 19876 GTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTG 19935 ||| || ||| |||| || || |||| || | | || || ||| || ||||| Sbjct 14244 GTCCTCGAACTTGTGCACGGAGGTCATTCAGTTCACGTCTCCTGATGAGGTCGCAGTGTG 14185 Query 19936 TAATCTGGCGTCCCTGTGCCTGCCGACTT---TCGTCAA-GGCCTCCTCCTTCGACTTTG 19991 || || ||||| || || |||| | ||||||| |||| || || || Sbjct 14184 CAACCTCGCGTCGCTCGCTCTTCCGAAGTACGTCGTCAACGGCCAGTTCGATC-ACAAG- 14127 Query 19992 CCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGA 20051 || | | ||| ||| | |||||||||||| || || || || ||||| | Sbjct 14126 --AAGCTTTTCGACGTGGTCAAGGTCGTCACGCGCAACCTCAACAAGGTGATCGACATCA 14069 Query 20052 ACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCG 20111 ||| || || | | ||| ||||| ||||| ||||| ||||| ||||||| | | Sbjct 14068 ACTACTATCCAGTCATTGAGGCCCGCAACTCGAACATGCGTCACCGCCCGATCGGTCTTG 14009 Query 20112 GCGTCCAGGGCCTGGCCGACGTTTTCATG---ATGCTCGGCCTCTCATTCGACGATCCCA 20168 | || ||||| || |||||||| |||||| |||| | ||| ||| || || || Sbjct 14008 GTGTTCAGGGTCTTGCCGACGTCTTCATGCTCATGCGCTGCC---CATGGGA-GAGCCAG 13953 Query 20169 -AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAA 20227 |||| ||||||||||| | ||||||||| || | ||| |||| || ||| | Sbjct 13952 GAGGCCCGCGAGCTCAATCGCGCTATCTTCGAGACCATCTACTACGCTGCACTCACTGCT 13893 Query 20228 TCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCC 20287 || || | ||||| ||| | || | ||| || | | ||| ||||| || ||| Sbjct 13892 TCTAATGAGATGGCCAAGGAGCAGGGTACTTACCCTACATACGCGGGCTCGCCAGCTTCC 13833 Query 20288 GAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACT------GAGAATGAGTTTTGGAGC 20341 ||||| | |||||||| ||| | |||||| | || || | | ||| Sbjct 13832 GAGGGCAAGCTCCAGCCCGACCTCTGGGGCATTACCCCCTCGGACAGGTGGGACTGGGCT 13773 Query 20342 GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATG 20401 ||||| | | ||| ||||| || | ||||| | ||||| || |||||| Sbjct 13772 ACCCTCCGTGCCAACATCGCTCAGCACGGCCTCAGGAACTCCCTCCTCGTGGCACCCATG 13713 Query 20402 CCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACC 20461 || || || || ||| | ||||| | || ||||||||| |||||||||||||| || Sbjct 13712 CCTACAGCATCCACCTCTCAGATTCTCGGCAACAACGAGTGCTTCGAGCCGTACACCTCC 13653 Query 20462 AACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTC 20521 ||||||||| ||||| | || || || || ||| | | || ||| ||||||| || Sbjct 13652 AACATCTACACACGTCGCATTCTTGCGGGCGACTTCACCGTCGTCAACGAGCACCTCCTC 13593 Query 20522 CGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGT--CCGAG 20579 |||||| || | || | |||||||| || ||||||| || | || || | Sbjct 13592 CGCGACCTGATGGAGCGAGGCTTGTGGTCGGCCGCCCTTAAGAACAAACTCGTGGCCCA- 13534 Query 20580 CCGGCGGGAGCGTCCAGG-CATTG--GATATCCCCCAGAACCTCAAGGACATTTACAGGA 20636 | ||| ||| ||| ||| | || ||||| | |||||||| | | |||| || Sbjct 13533 -CAACGGCTCCGTGCAGAACATCGACGAGATCCCTGATGACCTCAAGAAGCTGTACAAGA 13475 Query 20637 CCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACA 20696 | || ||||| || || ||| | ||||||||||||| ||||| ||| || |||| Sbjct 13474 CTGTGTGGGAGATTCCGCAGCGCGTCGTCATCGACATGGCCGCCGACCGCTCTGCATACA 13415 Query 20697 TCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCT 20756 |||||||| |||||||||||| ||| ||||| | || | | || ||||| | | Sbjct 13414 TCGACCAGAGCCAGTCGCTCAACATCTACATGGGAGAGCCTTCCTTCGCCAAGCTCACTT 13355 Query 20757 CCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACCC 20816 | ||||| | |||| |||| |||||| |||||||| ||||||||||| || || || | Sbjct 13354 CGATGCACTTCTACGCTTGGCGCAAGGGCCTCAAGACCGGCATGTACTACCTTCGTACGC 13295 Query 20817 G 20817 | Sbjct 13294 G 13294 >seq23003 Length=12893 Score = 428 bits (474), Expect = 5e-115 Identities = 1150/1738 (66%), Gaps = 59/1738 (3%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| |||||||| ||||| ||| |||| | |||||| | |||||| Sbjct 2367 TAGTACATGCCAGTCTTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTGAGCTTG 2308 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || | || | ||||| |||||||||| |||||| ||| |||||||||||| | Sbjct 2307 GCGAAGGAAGGCTCGCCCATGTAGATGTTGAGGGACTGGCTCTGATCGATGTACGCAGAG 2248 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 || ||||| |||||||||||||| |||||||||||||| | ||| ||| | Sbjct 2247 CGATCGGCAGCCATGTCGATGACTACGCGCTGCGGAATCTCCCACACAGTCTTGTACAGC 2188 Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCGGCTC---GC-ACAAT 78434 ||| || || || |||| || || | | || | | | | | || || | Sbjct 2187 TTCTTGAGATCATCGGGGATCTCGT-CGATGTTCTGCACTGAGCCGTTGTGAGCGACGAG 2129 Query 78435 TTCATTCTTAATTTGAGGGTTCCAG----CGA---TTGATCTTCTGAAGATCCCGGACCA 78487 || ||||| ||||| | | | | | | || | || || |||| | Sbjct 2128 TTTGTTCTT-----GAGGGCGGCCGACCACAAGCCTCGCTC--CATCAGGTCGCGGAGGA 2076 Query 78488 GGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCG 78547 ||||| ||| | | | ||| |||||||| || | || || |||||| |||| | Sbjct 2075 GGTGCTCGTTGACGACGGTGAAGTCGCCGGCAAGAATGCGACGTGTGTAGATATTGGAGG 2016 Query 78548 TGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGG 78607 ||||||||||||| ||||||||| || | ||||| | ||| || || || ||||||| Sbjct 2015 TGTACGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGTGAGGTGGATGCCGTAGGCATGG 1956 Query 78608 GTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------C 78661 | || || || || || |||| ||||| ||| ||| | | | ||| | Sbjct 1955 GCGCCACGAGGAGGGAGTTCCTGAGACCGTGCTGAGCGATGTTGGCACGGAGGGTAGCCC 1896 Query 78662 CGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACG 78721 |||||| || | | | ||||| | || ||||| || | |||||||| | Sbjct 1895 AGTCCCACCTGTCCGAGGGAGTAACACCCCAGAGATCGGGTTGGAGCTTGCCCTCGGAAG 1836 Query 78722 CCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGA 78781 ||||||| || |||| ||| | |||| ||||| ||| | ||| || | Sbjct 1835 CCGGCGAGCCAGCATACGTAGGGTAGGTGCCCTGCTCCTGGGCCATCTCGTTGGAAGCAG 1776 Query 78782 GCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCT--TGGT 78839 || || |||| ||| | | ||||||||| | ||||||||||| |||| ||| Sbjct 1775 TGAGTGCGGCGTAGTAGATGGTCTCGAAGATAGCGCGATTGAGCTCGCGGGCCTCCTGG- 1717 Query 78840 CTCGTCGAACGAAAGGCCGAGCAT---CATGAAGACATCGGCCAGGCCCTGGACGCCGAT 78896 ||| || | | ||| | |||| ||| ||||| ||||| || ||||| || || | Sbjct 1716 CTC-TCCCAGG---GGCAGCGCATGAGCATAAAGACGTCGGCAAGACCCTGAACACCAAG 1661 Query 78897 AGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCG 78956 | ||||||| |||||||||||||| || |||||| | | ||||| |||| Sbjct 1660 ACCGATCGGACGGTGGCGCATGTTCGAGTTGCGGGCCTCAGGGACTGGGTAGTAGTTGAT 1601 Query 78957 ATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAA 79016 ||||| || ||| ||||| || ||||| || ||| ||||| | || | Sbjct 1600 GTCGATCACCTTGTTGAGGTTGCGGGTGACTACTTTGACCACGTCGTAGAGCTTCTTGTG 1541 Query 79017 ATCAAAATGATTTCCTTTGATGAA--AGTCGGTAGGCAC-AGCGATGCCAGGTTGCACAC 79073 ||| || || ||| |||| || | | || | | | ||||| || ||||||||||| Sbjct 1540 ATCGAACTG---TCCGTTGACGACGTACTTGGGAAGAGCGAGCGACGCGAGGTTGCACAC 1484 Query 79074 GGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGAT 79133 || ||| || || | || |||| || |||||||| || || |||| ||| Sbjct 1483 AGCGACCTCATCAGGAGACGTGTACTGAATGACCTCCGTGCACAAGTTCGAGGACTGGAT 1424 Query 79134 GGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGG 79193 |||||| | || || |||||| ||| | || || | ||||| ||| ||||| || Sbjct 1423 GGTGCCAAGGTGCTGCTGGTTCGACTTGGCATTGCACGAATCCTTATAGAGGATGTAAGG 1364 Query 79194 CGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAAC 79253 ||| |||||||| | ||| || ||||| | | ||| | ||| ||||| ||| || Sbjct 1363 CGTGCCGGTCTCGATCTGCGACTCGAGAATGGAGAACCACAGCTCCTGGGCCTTGACGAC 1304 Query 79254 -CTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCAT 79312 | | | | | | || | |||| | |||| ||| | ||| | || || Sbjct 1303 ACGGCGAGCGCGGCCTTCGTTCT-CGTAACGCACGTACTTCTCCTCGAACTCGTCGCCCC 1245 Query 79313 AGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCT 79372 || ||| ||||| || |||| ||||| | || |||||| | | || Sbjct 1244 AGCACTCGAAGAGGCCTGGCGCTTCGTTGGGGCAGAAGAGCGACCAGTCGCCTCCGGCCT 1185 Query 79373 CAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCA 79432 | || || |||||| ||||| || | ||||||| | |||||| || || ||| Sbjct 1184 CGACGCGCTTCATGAACAGGTCGGGCACCCACAGGCCATAGAAGAGATCACGAGCACGGT 1125 Query 79433 TCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACG 79492 ||||||| | ||| |||||| ||||| || || || | ||||||||||||||||| Sbjct 1124 TCTCCTCCTTGCCATGGTTCTTCTTGAGCTCAAGGAAATCGAAGATGTCGGCGTGCCACG 1065 Query 79493 GCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGG 79552 ||||||||||||| ||||||| |||||||||||||| |||||||| | ||||| || | Sbjct 1064 GCTCCAGATAGATCGCGAACGCTCCCTTGCGCTTGCCACCGCCCTGATCAACGTAGCGAG 1005 Query 79553 CCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGT 79612 | || | |||| |||| ||||||||||| | || |||| || ||||| || ||| Sbjct 1004 CGGTATCGTTGTAAACACGGAGCATGGGGATGAGTCCGTTGGATGTTCCGTTGGTGCCGC 945 Query 79613 TGATTCGTGTA-CCGCTC---GCCCGAAT--GTTCGA--GCAGTGGATTCCGATGCCCCC 79664 || |||| | || || || || | | || ||| | || ||||| || Sbjct 944 GGA----TGTAGGAGTTCGAAGCGCGGATGCGGTGGACGGCA----ACACCAATGCCACC 893 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | ||||||||||| | ||||||| ||||||||| ||||||||||||||||| ||||| Sbjct 892 TGCGGACTTGGAGATGAGAGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATGGAGTC 833 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 |||||||| | || ||||||||| ||| | ||| || ||| || |||||||| Sbjct 832 CTCCTTCATCGTGAGCAGGAAGCACGACGAGAGCTGCGGACGAGGCGTGCCCGCGTTGAA 773 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 ||| || || || ||||||||||||| || || | || || || |||||| || Sbjct 772 GAGAGTAGGAGTGGCGTGCGTGAAGAGCTGCTGAGAAAGGAGGTCATAGGTCTCCAGCAC 713 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGC 79902 | |||| || ||| ||| | ||| || ||||| | ||||| | || ||| ||| Sbjct 712 GGCGGGGATGTTGTCCTTGTGAAGGCCCACGGCGACCCTCATGAGCATGTGCTGCGGC 655 Score = 425 bits (470), Expect = 6e-114 Identities = 1154/1743 (66%), Gaps = 45/1743 (3%) Strand=Plus/Plus Query 19102 GCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGT 19161 ||| ||| || | ||||| | ||||| || ||| | || ||| || |||| || Sbjct 655 GCCGCAGCACATGCTCATGAGGGTCGCCGTGGGCCTTCACAAGGACAACATCCCCGCCGT 714 Query 19162 CCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 | ||||| || ||||| | ||| || ||||||||||||| || || || || || Sbjct 715 GCTGGAGACCTATGACCTCCTTTCTCAGCAGCTCTTCACGCACGCCACTCCTACTCTCTT 774 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 |||||| || ||| |||||| | ||| || ||||| | | |||||||| || Sbjct 775 CAACGCGGGCACGCCTCGTCCGCAGCTCTCGTCGTGCTTCCTGCTCACGATGAAGGAGGA 834 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 | ||| |||||||||||||| ||||||||| ||||||| | ||||||||||| | || Sbjct 835 CTCCATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCTCTCATCTCCAAGTCCGCAGG 894 Query 19342 GGGTATCGG-GATCCACTGCTCGAATATCCGGTCGAGTGGTACAC--GAATCAATGGGAC 19398 || || || | | | | | | ||||| || | | || | ||| || || Sbjct 895 TGGCATTGGTGTTGCCGTCCAC-CGCATCCG--CGCTTCGAACTCCTACATCCGCGGCAC 951 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 |||||| | || |||| || |||| |||||||| || | |||| | || || | || Sbjct 952 CAACGGAACATCCAACGGACTCATCCCCATGCTCCGTGTTTACAACGATACCGCTCGCTA 1011 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 ||| | ||||| || ||||| |||||||| ||||||| ||||| || ||||| ||||| Sbjct 1012 CGTTGATCAGGGCGGTGGCAAGCGCAAGGGAGCGTTCGCGATCTATCTGGAGCCGTGGCA 1071 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 ||| ||| || | |||||||| || || |||||| || | ||||||| || Sbjct 1072 CGCCGACATCTTCGATTTCCTTGAGCTCAAGAAGAACCATGGCAAGGAGGAGAACCGTGC 1131 Query 19579 TCGCGACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGG 19637 ||| || |||||| | |||| ||||| | || ||||| |||||| || || ||| | Sbjct 1132 TCGTGATCTCTTCTATGGCC-TGTGGGTGCCCGACCTGTTCATGAAGCGCGTCGAGGCCG 1190 Query 19638 ACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCG 19697 | || ||| || | ||||| ||||| || ||||| ||| || |||| Sbjct 1191 GAGGCGACTGGTCGCTCTTCTGCCCCAACGAAGCGCCAGGCCTCTTCGAGTGCTGGGGCG 1250 Query 19698 AGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAG-GTGGT 19755 | | |||| | ||| |||| | ||||| | | ||||| | || | | || || Sbjct 1251 ACGAGTTCGAGGAGAAGTACGTGCGTTACGAGAACGAAGGCCGCGCTC--GCCGTGTCGT 1308 Query 19756 CCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTA 19815 | ||||| ||| | ||| | | | ||| | ||| ||||||||||||| || || Sbjct 1309 CAAGGCCCAGGAGCTGTGGTTCTCCATTCTCGAGTCGCAGATCGAGACCGGCACGCCTTA 1368 Query 19816 CATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAA 19875 ||| ||| ||||| | || |||||||| || ||| || || | ||| | ||| | Sbjct 1369 CATCCTCTATAAGGATTCGTGCAATGCCAAGTCGAACCAGCAGCACCTTGGCACCATCCA 1428 Query 19876 GTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAG---CCGGACGAGACTGCCGT 19932 ||| || ||| |||| || || |||| || | || | || || ||| || || Sbjct 1429 GTCCTCGAACTTGTGCACGGAGGTCATTCAG---TACACGTCTCCTGATGAGGTCGCTGT 1485 Query 19933 GTGTAATCTGGCGTCCCT-GTGCCTGCCGACT--TTCGTCAA-GGCCTCCTCCTTCGACT 19988 ||| || || ||||| || | | | || | | ||||||| || | ||||| Sbjct 1486 GTGCAACCTCGCGTCGCTCGCTCTTCCCAAGTACGTCGTCAACGGAC----AGTTCGATC 1541 Query 19989 TTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATC 20048 || | ||||| ||| | || ||||| || || || || || ||||| Sbjct 1542 ACAAGAAGCTCTACGACGTGGTCAAAGTAGTCACCCGCAACCTCAACAAGGTGATCGACA 1601 Query 20049 GGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGA 20108 |||| ||||| | | ||| ||||| ||||| ||||||||||| ||||||| Sbjct 1602 TCAACTACTACCCAGTCCCTGAGGCCCGCAACTCGAACATGCGCCACCGTCCGATCGGTC 1661 Query 20109 TCGGCGTCCAGGGCCTGGCCGACGTTTTCATG---ATGCTCGGCCTCTCATTCGACGATC 20165 | || || ||||| || |||||||| || ||| |||| | ||| | | | || | Sbjct 1662 TTGGTGTTCAGGGTCTTGCCGACGTCTTTATGCTCATGCGCTGCCCC----TGGGAGAGC 1717 Query 20166 C-CAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTG 20224 | |||| ||||||||||| | ||||||||| || | ||| |||| || ||| Sbjct 1718 CAGGAGGCCCGCGAGCTCAATCGCGCTATCTTCGAGACCATCTACTACGCCGCACTCACT 1777 Query 20225 GAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCG 20284 | || ||| | ||| | ||| | ||| | ||| |||| || ||||| || Sbjct 1778 GCTTCCAACGAGATGGCCCAGGAGCAGGGCACCTACCCTACGTATGCTGGCTCGCCGGCT 1837 Query 20285 TCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACT------GAGAATGAGTTTTGG 20338 |||||||| | ||||| || || | ||||| || ||| || | | ||| Sbjct 1838 TCCGAGGGCAAGCTCCAACCCGATCTCTGGGGTGTTACTCCCTCGGACAGGTGGGACTGG 1897 Query 20339 AGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCC 20398 ||||| | | ||| ||||| || | ||||| | ||||| |||||| Sbjct 1898 GCTACCCTCCGTGCCAACATCGCTCAGCACGGTCTCAGGAACTCCCTCCTCGTGGCGCCC 1957 Query 20399 ATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACG 20458 ||||| || || || ||| | ||||| | || ||||||||| |||||||||||||| Sbjct 1958 ATGCCTACGGCATCCACCTCACAGATTCTTGGCAACAACGAGTGCTTCGAGCCGTACACC 2017 Query 20459 ACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTG 20518 |||| |||||| ||||| | || ||||| || ||| | | || ||| ||||||| Sbjct 2018 TCCAATATCTACACACGTCGCATTCTTGCCGGCGACTTCACCGTCGTCAACGAGCACCTC 2077 Query 20519 GTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGA 20578 |||||||| || | || | |||||||| || | ||||| || | ||| Sbjct 2078 CTCCGCGACCTGATGGAGCGAGGCTTGTGGTCGGCCGCCCTCAAGAACAAACTCGTCGCT 2137 Query 20579 GCCGGCGGGAGCGTCCAG-GCATTG--GATATCCCCCAGAACCTCAAGGACATTTACAGG 20635 | ||| || ||| ||| | || |||||| | | |||||| | | |||| | Sbjct 2138 CACAACGGCTCAGTGCAGAACATCGACGAGATCCCCGATGATCTCAAGAAGCTGTACAAG 2197 Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCA-TCATCGACATGGCGGCCGATCGCGGCGCCTA 20694 || || ||||| || || ||| | | | ||||||||||||| ||||||||| || || Sbjct 2198 ACTGTGTGGGAGATTCCGCAG-CGCGTAGTCATCGACATGGCTGCCGATCGCTCTGCGTA 2256 Query 20695 CATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAG 20754 |||||| ||| |||||| ||||| ||| ||||| | || | | || ||||| | Sbjct 2257 CATCGATCAGAGCCAGTCCCTCAACATCTACATGGGCGAGCCTTCCTTCGCCAAGCTCAC 2316 Query 20755 CTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGAC 20814 || ||||| | |||| |||| |||||| |||||||| ||||||||||| || || || Sbjct 2317 TTCGATGCACTTCTACGCTTGGCGCAAGGGCCTCAAGACTGGCATGTACTACCTCCGTAC 2376 Query 20815 CCG 20817 || Sbjct 2377 GCG 2379 >seq23741 Length=113318 Score = 156 bits (172), Expect = 5e-33 Identities = 216/300 (72%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAG 59885 || ||||| || | |||||||||| ||||||| | || || ||||| ||| |||||| Sbjct 78011 ATTCACTCGGAAATGTACTCGCTCCTGATCGACACGTACGTAAAGGACGCGGTGGAGAAG 78070 Query 59886 GCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCC 59945 | | | |||||||||||||| |||||| || | || || | || || || |||||| Sbjct 78071 GATCGCCTGTTCCGTGCCATCGAGACGGTGGCCTCGGTCAAGAAGAAGGCGGAGTGGGCC 78130 Query 59946 ATGCAGTGGATGAGTCCTGGA--GCATCA-----TTTGCACAACGTCTCATAGCTTTTGC 59998 || ||||||| | | ||| || || ||||| | ||||| | | || || Sbjct 78131 CTGAAGTGGATT-GCCAAGGACGGCGTCGAGACCTTTGCGGAGCGTCTGGTCGGCTTCGC 78189 Query 59999 ATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCG 60058 || || || ||||||||||||||||| ||||| || || ||||||||||| ||||| Sbjct 78190 CGCTGTCGAGGGCATCTTCTTCTCTGGCTCCTTCTGCGCCATCTTCTGGCTCAAGAAGCG 78249 Query 60059 TGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || ||||| |||||||| || ||| || ||||| || || Sbjct 78250 CGGCCTCATGCCTGGTCTTGCCTTCTCGAACGAGCTCATCAGCCGCGATGAGGGTCTTCA 78309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548359570617120