Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq22955 113 3e-20 seq23826 109 3e-19 seq22211 105 4e-18 seq23480 102 5e-17 seq18924 100 2e-16 seq19772 98.7 6e-16 seq23603 95.1 8e-15 seq24030 93.3 3e-14 seq11646 82.4 5e-11 >seq22955 Length=9686 Score = 113 bits (124), Expect = 3e-20 Identities = 168/237 (71%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | ||| | |||||||| |||||| || ||||| || || | | Sbjct 8382 CCGCCACGCAGACGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8441 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || || || || || || | ||||| ||||| || || Sbjct 8442 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 8501 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||||||||| ||||||||| || | | || ||||| |||||| || Sbjct 8502 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTTTCGATCGTGTCCGAGCTCTCGACC 8561 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTA 34716 || | ||| || || || ||||| | || ||||| || |||||||||||| ||||| Sbjct 8562 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGTTG-TTGTA 8617 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || ||||||||| ||||| || || | ||| || || |||| ||||| || Sbjct 8178 TGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGCAAGCGTACGACCGTCCTCAAGCTGC 8237 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 |||||||| || || | ||||| ||||| || || | ||||||||||| |||||| Sbjct 8238 TTACCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTC 8297 Query 34624 TGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 || || ||| | || || || ||| ||| ||||| | || || || ||||||| Sbjct 8298 TG-CTTCACGTTCTCGATGGTATCGCTCG-ACTCGACTTCGAGAGTAATGGTCTTACCGG 8355 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || || |||||||| Sbjct 8356 TCAAAGTCTTGACGAAGATCTGCAT 8380 Score = 82.4 bits (90), Expect = 5e-11 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | ||| || | ||| | || || || |||||| || ||||| || || Sbjct 7659 GTTGCCACCACGAAGGCGAAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 7718 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | || || || |||| || || || || ||||| || || | |||||| ||||| || Sbjct 7719 GGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGG 7778 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTC 34653 || | ||||||||||| ||||||||| ||||||| | || || || ||| | Sbjct 7779 GGGAATACCCTCCTTGTCCTGGATCTTTTG-TTTAACGTTCTCGATGGTATCGCTCG-AC 7836 Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTT 34691 || || || | ||| ||||| || ||||| || || || Sbjct 7837 TCGACCTCAAGGGTGATCGTCTTGCCGGTCAAGGTCTT 7874 >seq23826 Length=10614 Score = 109 bits (120), Expect = 3e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | ||| || | ||| | ||||||||| |||||| || ||||| || || Sbjct 8979 GTTGCCACCACGAAGGCGGAGCACAAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAGTC 8920 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | ||| || || |||| || || || ||||| || || || | ||||| ||||| || Sbjct 8919 GGCAAGGGTACGGCCGTCCTCGAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGGTCGGG 8860 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCT 34654 || | ||||||||||| ||||||||| || ||| | ||| ||||| | || Sbjct 8859 GGGAATACCCTCCTTGTCCTGGATCTTTTG-CTTCACGTTCTCAATAGTGTCCGAGGACT 8801 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || | ||| ||||| || ||||| | || ||||| || |||||||| Sbjct 8800 CGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 8749 Score = 102 bits (112), Expect = 5e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | ||| | ||||| || |||||| || ||||| || || | | Sbjct 8519 CCGCCACGCAGACGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8460 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || ||||| || || || | |||||| || || || || Sbjct 8459 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATAAGACGCTGCTGATCGGGGGGA 8400 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||||||||| ||||||||| || | | || ||||| | ||| || Sbjct 8399 ATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTTTCGATGGTGTCCGAGGACTCGACC 8340 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || | ||| ||||| || ||||| | || ||||| || |||||||| ||| Sbjct 8339 TCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATATTG 8289 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | ||| | ||||| || |||||| || ||||| || || | | Sbjct 8747 CCTCCACGAAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 8688 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || ||||| || || || | ||||| ||||| || || Sbjct 8687 AGGGTACGGCCGTCCTCAAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 8628 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | ||||||||||| |||||| || || ||| | || || || ||| ||| | Sbjct 8627 ATGCCCTCCTTGTCCTGGATCTTCTG-CTTCACGTTCTCGATGGTATCGCTCG-ACTCGA 8570 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || || ||||| || || || || || || |||||||| Sbjct 8569 CTTCGAGAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATCTGCAT 8521 >seq22211 Length=15201 Score = 105 bits (116), Expect = 4e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | |||||||| |||||| || ||||| || || | || || || Sbjct 4192 AGACGAAGCACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 4133 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || ||||| || || || | ||||| ||||| || || | |||||| Sbjct 4132 CCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCC 4073 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| ||||||||| || | | || ||||| |||||| || || | ||| Sbjct 4072 TTGTCCTGGATCTTTTGCTTCACGTTTTCGATGGTGTCCGAGCTCTCGACCTCGAGGGTG 4013 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| | || || || || |||||||| Sbjct 4012 ATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 3975 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | || || | ||| | ||||| || |||||| || ||||| || || | Sbjct 4659 CGCCACCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 4600 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || |||| ||||| || ||||| || || || | |||||| ||||| || | Sbjct 4599 CCAGCGTACGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGACGCTGCTGGTCGGGAG 4540 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||| ||||||||| || ||| | || || || |||||| Sbjct 4539 GAATACCCTCCTTGTCCTGGATCTTTTG-CTTCACGTTCTCGATGGTATCCGAGCTCTCG 4481 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | ||| ||||| |||||||| | || ||||| || |||||||| Sbjct 4480 ACCTCGAGGGTGATCGTCTTACCGGTAAGGGTCTTCACGAAGATCTGCAT 4431 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || ||||||||||||||| || || | || || || |||| ||||| || Sbjct 4405 TGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGC 4346 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| ||||| || || | ||||||||||| ||||| Sbjct 4345 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTC 4286 Query 34624 TGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 || || ||| | || || || ||| ||| ||||| | || || || ||||||| Sbjct 4285 TG-CTTCACGTTCTCGATGGTATCGCTCG-ACTCGACTTCGAGAGTAATGGTCTTACCGG 4228 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || || |||||||| Sbjct 4227 TCAAAGTCTTGACGAAGATCTGCAT 4203 >seq23480 Length=26370 Score = 102 bits (112), Expect = 5e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| || ||||| || || | ||| || || |||| || || || Sbjct 13260 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGC 13319 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | |||||| || || || || | ||||||||||| ||||||| Sbjct 13320 TTACCCGCGAAGATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTT 13379 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || || || |||||| || || | ||| || || || ||||| Sbjct 13380 TG-CTTCACGTTCTCGATGGTATCCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGT 13438 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTG 34710 | || ||||| || |||||||||||| Sbjct 13439 GAGGGTCTTCACGAAGATCTGCATGTTG 13466 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | ||||| | ||| | ||||| || |||||| || ||||| || || Sbjct 12550 GTTGCCACCACGCAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 12609 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | || || || |||| ||||| || |||||||| || || | |||||| ||||| || Sbjct 12610 GGCGAGAGTGCGGCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCGGG 12669 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCT 34654 || | ||||||||||| |||||| || || | || || || ||| || Sbjct 12670 GGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGGTATCGCTCG-ACT 12728 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| | ||| || || ||||| || | || || || || |||||||| Sbjct 12729 CGACTTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 12780 >seq18924 Length=24070 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | || || | ||| | |||||||| |||||| || ||||| || || Sbjct 17528 GTTGCCACCACGCAGGCGAAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 17587 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | || || || |||| ||||| || ||||| || || || | ||||| ||||| || Sbjct 17588 GGCGAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCGGG 17647 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCT 34654 || | ||||||||||| |||||| || || ||| | || ||||| ||||| Sbjct 17648 AGGAATACCCTCCTTGTCCTGGATCTTCTG-CTTCACGTTCTCGATCGTGTCCGAGCTCT 17706 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| | ||| ||||| || || || || || || || || |||||||| Sbjct 17707 CGACTTCGAGGGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 17758 >seq19772 Length=5961 Score = 98.7 bits (108), Expect = 6e-16 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| || ||||| || || | || || || |||| ||||| || Sbjct 1804 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGC 1863 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | |||||| ||||| || || | ||||||||||| ||||||| Sbjct 1864 TTACCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTT 1923 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || ||||| | ||| || || | ||| || || || ||||| Sbjct 1924 TG-CTTCACGTTCTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 1982 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTG 34710 | || ||||| || ||||||||| || Sbjct 1983 GAGGGTCTTCACGAAGATCTGCATGCTG 2010 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | ||||||| || | ||||| || |||||||||||||| || || | Sbjct 1322 CGCCACCACGCAGACGCAGTACGAGGTGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGG 1381 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || ||||||| || || || || || || || | ||||| ||||| || | Sbjct 1382 CCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAG 1441 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCC 34656 | | ||||||||||| |||||| || || | | || ||||| ||| ||| Sbjct 1442 GGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTCGCTCG-ACTCG 1500 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || || ||||| || || || || || || |||||||| Sbjct 1501 ACTTCGAGAGTAATGGTCTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 1550 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | ||| | ||||| || |||||| || ||||| || || | Sbjct 1552 CCGCCACGAAGACGGAGCACGAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCC 1611 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || || || || || | ||||| ||||| || || Sbjct 1612 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGA 1671 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | ||||||||||| |||||| || || ||| | || || || ||| ||| | Sbjct 1672 ATACCCTCCTTGTCCTGGATCTTCTG-CTTCACGTTCTCGATCGTATCGCTCG-ACTCGA 1729 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || || |||||||| | || || || || |||||||| Sbjct 1730 CTTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCAT 1778 >seq23603 Length=18425 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| || | || | ||||| ||| |||||| || ||||| || || | Sbjct 256 CCGCCACGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 315 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || ||||| || || | ||||| ||||| || || Sbjct 316 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 375 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||||||||| || ||| | || ||||| | ||| || Sbjct 376 ATACCCTCCTTGTCCTGGATCTTTTG-CTTCACGTTCTCGATCGTGTCAGAGGACTCGAC 434 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || || ||||| || | || ||||| || ||||||||| Sbjct 435 CTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCATG 483 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| || ||||| || || | || || || |||| ||||| || Sbjct 52 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCAAGCTGC 111 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | ||||| ||||| || || | ||||||||||| ||||||| Sbjct 112 TTACCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTT 171 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || ||||| | ||| || || | || || || ||||| || Sbjct 172 TG-CTTCACGTTCTCGATCGTGTCAGAGGACTCGACCTCGAGAGTAATGGTCTTACCCGT 230 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || || || |||||||| Sbjct 231 GAGGGTCTTGACGAAGATCTGCAT 254 >seq24030 Length=66970 Score = 93.3 bits (102), Expect = 3e-14 Identities = 164/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | |||||| | || | |||||||| ||||||||||||||| || || Sbjct 65960 GTTGCCACCACGAAGACGAAGGACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTC 66019 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 | || || || |||| ||||| || || || || || || | ||||| ||||| || Sbjct 66020 AGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCAGG 66079 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT-- 34652 || | ||||||||||| |||||| || || ||| | || || ||||| Sbjct 66080 GGGAATACCCTCCTTGTCCTGGATCTTCTG-CTTCACGTTCTCGATCGT---ATCGCTAG 66135 Query 34653 -CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||| | ||| ||||| || || || || || || || || |||||||| Sbjct 66136 ACTCGACTTCGAGGGTGATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 66190 >seq11646 Length=142 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || ||||| || || | ||| || || |||| ||||| || Sbjct 2 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCAAGCTGC 61 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | |||||| ||||| || || | ||||||||||| ||||||| Sbjct 62 TTACCCGCGAAGATAAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTT 121 Query 34624 TGTTT 34628 || || Sbjct 122 TGCTT 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314637165686834