Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq23480 125 6e-24 seq23826 116 3e-21 seq22955 116 3e-21 seq19772 116 3e-21 seq24030 113 4e-20 seq22211 104 2e-17 seq18924 104 2e-17 seq18730 98.7 9e-16 seq19654 95.1 1e-14 seq11646 89.7 4e-13 seq23603 87.8 2e-12 >seq23480 Length=26370 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || || || || Sbjct 12589 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCAAGCTGCTTACCGGCGAA 12648 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||||||||||||||||| ||| | || ||| |||||| ||| ||||| || | | Sbjct 12649 GATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 12708 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | ||||| | || ||||| || || || || Sbjct 12709 CTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGAC 12768 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 12769 GAAGATCTGCAT 12780 Score = 100 bits (110), Expect = 2e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||||||| || || |||| |||||||| ||||| || || Sbjct 12817 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 12876 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || || |||||| ||| ||||| || | | Sbjct 12877 GATGAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTT 12936 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCA 39262 | | | |||||||||||||| || || | ||||| | || || |||| Sbjct 12937 CTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCA 12986 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||||||| || || |||| || ||||| || ||||| || Sbjct 13271 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 13330 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 |||||||||||||| |||| ||| | | ||| |||||| ||| || || || | | Sbjct 13331 GATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 13390 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | ||||| ||| ||| || || | ||||| | || || || || || || Sbjct 13391 CTCGATGGTATCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 13447 Query 39270 AACAAAGATTTGCATCTT 39287 || ||||| ||||| || Sbjct 13448 CACGAAGATCTGCATGTT 13465 >seq23826 Length=10614 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||||||| || || |||| |||||||| || ||||| || Sbjct 8712 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCCTCAAGCTGCTTACCCGCGAA 8653 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | || ||| |||||| ||| ||||| || | | Sbjct 8652 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 8593 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | || || | || || |||| || || || Sbjct 8592 CTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCAGTCAAAGTCTTGAC 8533 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 8532 GAAGATCTGCAT 8521 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || ||||| || || |||||||| || || | Sbjct 8964 GCGGAGCACAAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAGTCGGCAAGGGTACGGCC 8905 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || ||||| || || || ||||||||||||| ||| | | ||| || Sbjct 8904 GTCCTCGAGCTGCTTACCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTT 8845 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || || || | || | | || || ||||| || || | ||||| Sbjct 8844 GTCCTGGATCTTTTGCTTCACGTTCTCAATAGTGTCCGAGGACTCGACCTCGAGGGTGAT 8785 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || || ||||| ||||| Sbjct 8784 CGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 8749 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||||||| || || |||| || ||||| || ||||| || Sbjct 8484 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAA 8425 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 |||||||||||||| |||| ||| | | ||| |||||| ||| || || || | | Sbjct 8424 GATAAGACGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 8365 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | || || ||||| || || | ||||| | || || || || || || || Sbjct 8364 TTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCAC 8305 Query 39273 AAAGATTTGCATCTT 39287 ||||| ||||| || Sbjct 8304 GAAGATCTGCATATT 8290 >seq22955 Length=9686 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| || || || || Sbjct 7961 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 8020 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | || ||| |||||| ||| ||||| || | | Sbjct 8021 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATT 8080 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | ||||| | || ||||| || || || || Sbjct 8081 CTCGATGGTATCGCTCGACTCGACTTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGAC 8140 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 8141 GAAGATCTGCAT 8152 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| ||||| || || || |||||||| || || |||| |||||||| || || || || Sbjct 8189 CTCCTTTTGGATGTTGTAGTCGGCAAGCGTACGACCGTCCTCAAGCTGCTTACCGGCGAA 8248 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||| ||||||||||||| ||| | | ||| |||||| ||| ||||| || | | Sbjct 8249 GATAAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 8308 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | || || | || || |||| || || || Sbjct 8309 CTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGAC 8368 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 8369 GAAGATCTGCAT 8380 Score = 100 bits (110), Expect = 2e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 7698 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 7757 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||||||||||||||| | ||| | | ||| |||||| ||| || ||||| | | Sbjct 7758 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGTTTAACGTT 7817 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCA 39262 | | | |||||||||||||| || || | ||||| | || || |||| Sbjct 7818 CTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCA 7867 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||||||| || || |||| || ||||| ||||| || || Sbjct 8417 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 8476 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| ||| | || ||| |||||| ||| || || || | | Sbjct 8477 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 8536 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | ||| || ||| ||| || || | ||||| | || || || || || || Sbjct 8537 TTCGATCGTGTCCGAGCT---CTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 8593 Query 39270 AACAAAGATTTGCATCTT 39287 || ||||| ||||| || Sbjct 8594 CACGAAGATCTGCATGTT 8611 >seq19772 Length=5961 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| ||||| || || Sbjct 1587 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 1646 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | | ||| |||||| ||| ||||| || | | Sbjct 1647 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 1706 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||||||||||||||| || || | |||||| | || || || || || || || Sbjct 1707 CTCGATCGTATCGCTCGACTCGACTTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTGAC 1766 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 1767 GAAGATCTGCAT 1778 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || ||||| || || || ||||| || || || |||| || ||||| ||||| || || Sbjct 1360 TCCTTTTGAATGTTGTAGTCGGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCAGCGAAG 1419 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || ||||||||||||| || | || ||| |||||| ||| ||||| || | | Sbjct 1420 ATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTT 1479 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | ||| ||||||||||| || || | || || | || ||||||| || || || Sbjct 1480 TCGATCGTGTCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCCGTCAAGGTCTTGACG 1539 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 1540 AAGATCTGCAT 1550 >seq24030 Length=66970 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| ||||| || || || || || || || || |||| |||||||| ||||| || || Sbjct 65999 CTCCTTTTGAATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 66058 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||| ||||||||||| | ||| | | ||| |||||| ||| ||||| || | | Sbjct 66059 GATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 66118 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||||||||| ||||| || || | ||||| | || || |||| || || || Sbjct 66119 CTCGATCGTATCGCTAGACTCGACTTCGAGGGTGATCGTCTTGCCAGTCAAGGTCTTGAC 66178 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 66179 GAAGATCTGCAT 66190 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || || || || Sbjct 66455 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCAAGCTGCTTACCAGCGAA 66514 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | | ||| |||||| ||| ||||| || | | Sbjct 66515 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 66574 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||||||||| ||||| || || | || || | || || |||| || || || Sbjct 66575 CTCGATCGTATCGCTAGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAAGGTCTTGAC 66634 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 66635 GAAGATCTGCAT 66646 >seq22211 Length=15201 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| ||||| || || || ||||| || || || |||| |||||||| ||||| || || Sbjct 4394 CTCCTTTTGAATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGCTTGCCGGCGAA 4335 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||||| || | | ||| |||||| || ||||| || | | Sbjct 4334 GATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 4275 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | || || | || || |||| || || || Sbjct 4274 CTCGATGGTATCGCTCGACTCGACTTCGAGAGTAATGGTCTTACCGGTCAAAGTCTTGAC 4215 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 4214 GAAGATCTGCAT 4203 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || ||||| || Sbjct 4622 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTACGACCGTCCTCAAGCTGCTTACCCGCGAA 4563 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||||||||||||||||| || | | ||| |||||| ||| || || || | | Sbjct 4562 GATAAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 4503 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | | ||||| ||| ||| || || | ||||| | || || || || || || Sbjct 4502 CTCGATGGTATCCGAGCT---CTCGACCTCGAGGGTGATCGTCTTACCGGTAAGGGTCTT 4446 Query 39270 AACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 4445 CACGAAGATCTGCAT 4431 >seq18924 Length=24070 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || ||||| || || || |||| |||||||| || || || || Sbjct 17795 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAA 17854 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | | ||| |||||| ||| || || || | | Sbjct 17855 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 17914 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | ||| || | || ||||| || || || || Sbjct 17915 CTCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTACCCGTGAGGGTCTTGAC 17974 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 17975 GAAGATCTGCAT 17986 >seq18730 Length=7279 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || |||| |||||||| || || || || Sbjct 315 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 256 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | | ||| |||||| ||| || || || | | Sbjct 255 GATGAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTT 196 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||||||||||||| || || | ||| || | || ||||| || || || || Sbjct 195 CTCGATGGTATCGCTCGACTCGACTTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTGAC 136 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 135 GAAGATCTGCAT 124 >seq19654 Length=45035 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 39128 CGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTT 39187 ||||||| ||||| ||||| |||| || || |||||||||| | ||| | | ||| | Sbjct 1927 CGTCATCGAGCTGCTTGCCTTCAAAGATGAGGCGCTGCTGGTTAGAGGGAATACCCTCCT 1986 Query 39188 TGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 ||||| ||| ||||| || | || | | |||||||||||||| || || | |||| Sbjct 1987 TGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTCGACTCGACTTCGAGGGTGA 2046 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || || || || || || || ||||| |||||||| Sbjct 2047 TGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATCTT 2086 >seq11646 Length=142 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||||||| || || |||| |||||||| || ||||| || Sbjct 13 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCAAGCTGCTTACCCGCGAA 72 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTT 39206 ||||||||||||||||||| ||| | | ||| |||||| ||| || || || Sbjct 73 GATAAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTTTGCTT 126 >seq23603 Length=18425 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || |||| |||||||| Sbjct 280 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCGTCCTCAAGCTGC 339 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| || | | ||| |||||| ||| || Sbjct 340 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTT 399 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || || | || | | ||| || ||||| || || | ||||| | || ||||| Sbjct 400 TGCTTCACGTTCTCGATCGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTG 459 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 460 AGGGTCTTCACGAAGATCTGCAT 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429419444873474