Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq23068 84.2 2e-11 >seq23068 Length=17433 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 103374 GACGTTGCCCAAATCGCCAACGTGTCTGACGAGCGCGTCGGGCGCGCCGTGCGTTTCGCC 103433 ||||||||||| ||||| ||||| | || |||| || |||||||| | | ||| Sbjct 17371 GACGTTGCCCAGGTCGCCGACGTGACGCTCGTCGTCGTCAGGGCCGCCGTGCTTCTTGCC 17312 Query 103434 GGTGGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTGCTTGTGTCGCCAAACTCGTG 103493 | ||||||||| || | ||||| | ||| |||||| | |||| ||||||||||| Sbjct 17311 GTGGGGATTAAAGTGCGCACCGGCGCTCACGCACCCGTTGGTGTTGTCCCCAAACTCGTG 17252 Query 103494 CACGTGAAAACCGTGC 103509 ||||| || |||||| Sbjct 17251 GACGTGGAAGCCGTGC 17236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409540484927382