Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_000866.4 Length=168903 Score E Sequences producing significant alignments: (Bits) Value seq3870 91.5 2e-13 >seq3870 Length=345 Score = 91.5 bits (100), Expect = 2e-13 Identities = 170/246 (69%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 44547 ATATCAGGATACATCCTTTTGCTTGCGCACTCTAGAGCAAGCTGTTTAATATCATAGTTC 44606 ||||| |||||||| | |||||||||||||| || || |||||||| || || |||||| Sbjct 301 ATATCCGGATACATGCGCTTGCTTGCGCACTCCAGCGCCAGCTGTTTGATGTCGTAGTTC 242 Query 44607 GGATCGTCTTTATAAAGATTAACACCTTCTTCAA-CGAACATAACAAGCTTAGGGAAAAT 44665 |||||| |||| | | | || | ||| || || || | | || || || ||||| | Sbjct 241 GGATCGCCTTTTTTATGGTTCAGACCATCGCGAATCGCA-AACACCAGTTTCGGGAACAC 183 Query 44666 AGGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAAT 44725 | |||| | | | ||| || ||| ||||| || ||| || | || |||||| Sbjct 182 CGCAGTTTTACGGTTTTTACCGAGGCCTGCGATACGGTTACGCAGGATCGATTCCTGAAT 123 Query 44726 CATTCG---TTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGAGTCTG 44782 || || ||| |||| || ||| |||||| || |||||||| || ||||| Sbjct 122 CAGGCGCGATTC---CCAGCTGGTGCCCAGACCAAAACCAAAGGTTACAAACGGCGTCTG 66 Query 44783 TCCGTT 44788 ||||| Sbjct 65 ACCGTT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540291846071960