Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1288 131 2e-25 >seq1288 Length=22276 Score = 131 bits (144), Expect = 2e-25 Identities = 297/439 (68%), Gaps = 17/439 (4%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 |||||| || || ||||| || | |||||||| | |||||| || ||||| || || || Sbjct 677 CAGACAGGCAAAGTCGCAGTGGAGGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGAAGGT 618 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | ||| |||| || || ||||| | ||| || |||| | |||||| || || || Sbjct 617 GAGGCCGTGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAA 558 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGT-CGCGTCTTTGT 17138 ||| || |||||||||| |||||||||| | || ||||| | | |||| ||| Sbjct 557 GAAGATGCCCTCGACGGCGGCAAACGCGACGAGGCGCTCGGCAAAGCTGCGCGAGTTTT- 499 Query 17139 TACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCC----ATCGTTTC 17193 ||| |||| | |||||||||| || |||| ||| | ||||| || Sbjct 498 --CGA-TCCAGCGGATCGCCCACTCGGCCTTCTTGC-----GCACGGCGGGGATCGTCTC 447 Query 17194 TATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAG 17253 ||||| || || | | | || | ||| | || || || ||||| || || Sbjct 446 GATGGCGTTGAAGAGCTGGGCCTTGCGCGCGGTGTCCTTGATGTAGGTGTCGATCAGCAG 387 Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313 |||||| | |||||||| ||||| || ||||| || || || ||||| ||||| || || Sbjct 386 ACTGTACGTCTCGGAGTGGATGTTTTCGATGGCGATTTGGAAGCCGTAGAAGCAGCGCGC 327 Query 17314 TTCCGCTATTTGAACTTCC-ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGT 17372 || | ||||| || || || | ||| || || || || ||||| |||||||||| Sbjct 326 CTCGGGGATTTGCACCTCGGACAT-GAAGCGCGTGGCGAGGTTCTCGTTGACGATGCCGT 268 Query 17373 CGCTCGCGGCGAAAAACGC 17391 | ||| || || || || Sbjct 267 CCGACGCCGCAAAGAAGGC 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517478791332360