Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_001697.1 Length=32355 Score E Sequences producing significant alignments: (Bits) Value seq55 98.7 2e-16 seq16 96.9 7e-16 seq1151 93.3 9e-15 seq155 80.6 6e-11 seq70 80.6 6e-11 >seq55 Length=127961 Score = 98.7 bits (108), Expect = 2e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 ||||||| ||||| ||||||||||| |||||||| ||||||||||| |||||||||| Sbjct 112866 TGGTGGGCCGTGATGGATTCGAACCATCGACCAAAAGATTAAAAGTCTTCTGCTCTACCA 112807 Query 416 ACTGAGCTAACGACCCA 432 |||||||||||| |||| Sbjct 112806 ACTGAGCTAACGGCCCA 112790 >seq16 Length=55361 Score = 96.9 bits (106), Expect = 7e-16 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||||||| |||||||||||| ||||||| | ||||||| | |||||||||| Sbjct 54200 TGGTGGGTCGTGTGGGATTCGAACCTACGACCAATTGGTTAAAAGCCAACTGCTCTACCA 54141 Query 416 ACTGAGCTAACGACCCAATTA 436 |||||||||||||||||| || Sbjct 54140 ACTGAGCTAACGACCCAAATA 54120 >seq1151 Length=22315 Score = 93.3 bits (102), Expect = 9e-15 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||||||| |||||||||||| ||||||| | ||||||| | |||||||||| Sbjct 9534 TGGTGGGTCGTGTGGGATTCGAACCTACGACCAATTGGTTAAAAGCCAACTGCTCTACCA 9475 Query 416 ACTGAGCTAACGACCC 431 |||||||||||||||| Sbjct 9474 ACTGAGCTAACGACCC 9459 >seq155 Length=27654 Score = 80.6 bits (88), Expect = 6e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 355 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 414 |||||||| || ||||||||||||||| |||| | |||||| |||| |||||||||| Sbjct 9725 TTGGTGGGCTGTCAAGGATTCGAACCTTGGACCTATTGATTAAGAGTCAACTGCTCTACC 9784 Query 415 GACTGAGCTAAC 426 ||||||||||| Sbjct 9785 AACTGAGCTAAC 9796 Score = 80.6 bits (88), Expect = 6e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 355 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 414 |||||||| || ||||||||||||||| |||| | |||||| |||| |||||||||| Sbjct 10026 TTGGTGGGCTGTCAAGGATTCGAACCTTGGACCTATTGATTAAGAGTCAACTGCTCTACC 10085 Query 415 GACTGAGCTAAC 426 ||||||||||| Sbjct 10086 AACTGAGCTAAC 10097 >seq70 Length=122237 Score = 80.6 bits (88), Expect = 6e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 371 GATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTA 424 || |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 54483 GACTCGAACTCGCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTA 54430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103401717968958