Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq71 102 7e-17 >seq71 Length=600064 Score = 102 bits (112), Expect = 7e-17 Identities = 191/279 (68%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 120851 AATTGGATCAAGCTCAATAATGAAATCATGATCCAGAAAGATGGGAAGTATCAATTTGAA 120910 || |||||| |||||||||||| ||||||||| | || || | ||| | | ||||| Sbjct 225417 AAATGGATCCTGCTCAATAATGAGATCATGATCAAAAAGGACGACGAGTTTAACCTTGAA 225358 Query 120911 AAGGATAAGGAGGCCGTACATAGTTACTTTGTTGATTACATAAATCAAAACACAGTCTTT 120970 || || |||||||||||| |||||| | ||||| | ||| |||| || || || Sbjct 225357 AAAGACAAGGAGGCCGTAAGGTCATACTTTCTGGATTATGTCAATAAAAATACCGTTTTC 225298 Query 120971 TTCCATGATCTGAAAGAGAAGCTGGACTATCTGATTAAAAATGATTATTACGAGGAAGAA 121030 || | |||||||| || | ||||| |||||| |||| |||| ||| | || Sbjct 225297 TTTTACACCCTGAAAGAAAAAATAGACTACCTGATTGAAAACAATTACTAC----ATCAA 225242 Query 121031 TTCTTAAG-CAAATATACATTCGAACAGATTAAATCAATCTATAAGATTGCTTACAGTTA 121089 || ||||| | ||| | || ||| || | || | ||| | ||| || | Sbjct 225241 TTTTTAAGAGCAGTATTCCTTTGAAGAGCTCCAAAGGGTATATGATTTTGTGTATTCCAA 225182 Query 121090 CAAATTCAGATTCCCTTCTTTTATGAGTGCCTTTAAGTT 121128 |||||| | || | ||||| ||||||||||||||||| Sbjct 225181 AAAATTCCGCTTTCAGTCTTTCATGAGTGCCTTTAAGTT 225143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429952279260119