Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq426 102 1e-16 seq396 98.7 1e-15 >seq426 Length=101737 Score = 102 bits (112), Expect = 1e-16 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 124535 TACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGC 124594 |||||||||||| ||| ||||||| ||||| ||||| || || || | ||| |||| | Sbjct 290 TACAATGCAAATCTTTGTAAAGACTCTAACTGGCAAGACCATCACCCTTGAGGTTGAGGG 231 Query 124595 AAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 |||||| || ||| | || || |||||||| || || ||||| || ||||| Sbjct 230 TTCTGATACTATCGAAAATGTCAAGACTAAGATTCAAGACAAGGAGGGTATTCCTCCTGA 171 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714 || || | || ||||| || || || ||| | |||||| | || || | ||||| Sbjct 170 CCAGCAGCGTCTAATTTTCGCTGGCAAGCAACTCGAGGATGGCCGCACCCTTTCTGATTA 111 Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || || || ||| | || | || | ||| | || || ||||| Sbjct 110 CAATATTCAGAAGGAGTCCACTCTCCACCTCGTCCTCCGTCTCCGTGGAGGTAT 57 >seq396 Length=82706 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 124535 TACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGC 124594 |||||||||||| ||| ||||||| ||||| ||||| || || || ||||| |||| | Sbjct 290 TACAATGCAAATCTTTGTAAAGACCCTAACTGGCAAGACCATCACCCTAGAGGTTGAGGG 231 Query 124595 AAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 ||||| || ||| | || || |||||||| || || ||||| || ||||| Sbjct 230 TTCCGATACTATCGAAAATGTCAAGACTAAGATTCAAGACAAGGAGGGTATTCCTCCTGA 171 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714 || || | || ||||| || || || ||| | |||||| | || || | ||||| Sbjct 170 CCAGCAGCGTCTGATTTTCGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCTGATTA 111 Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || ||| | || | || | ||| | || || ||||| Sbjct 110 CAATATCCAGAAGGAGTCCACTCTCCACCTCGTCCTCCGTCTCCGTGGAGGTAT 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755358480073600