Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq329 89.7 1e-12 >seq329 Length=161735 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 35522 AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATG 35581 ||||| ||| |||||||| ||| || | || |||||| || | | | |||| Sbjct 13453 AATCCCGATTCCAGAAGGATTATTGTGTCTGCCTGGAATGTGGCAGAGATAGAACATATG 13512 Query 35582 GCTCTTCCTCCATGCCACATGACTGCT--CAATTTTATGTGGCTAATGGAGAATTGTCGT 35639 || ||||| || ||||| || || | || |||||||| ||| | ||| || || | Sbjct 13513 GCACTTCCACCCTGCCA--TGCCTTTTTCCAGTTTTATGTAGCTGACGGAAAACTGAGCT 13570 Query 35640 GCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCAT 35699 | ||| | ||||||||||| | |||| | |||| || || || || ||||| || | Sbjct 13571 GTCAGCTTTATCAGCGAAGTGCAGATATTTTTCTGGGGGTACCTTTTAACATTGCCTCCT 13630 Query 35700 ACTCTCTTCTGACTCATCTGATGGC-CAGTATGGTGGGTCTAAAACCGGGAGAGTTTATC 35758 | | | |||||| || | || ||| | | || || | ||||||| |||||| Sbjct 13631 ATGCCTTACTGACTATGATGGTTGCACAGGTTTG-CGGACTGGAGTCGGGAGATTTTATC 13689 Query 35759 CTCACTCTTGGTGACGCACACATTTATAATACCCACATTGA 35799 | || ||||| || || ||| ||||||||| ||| ||||| Sbjct 13690 CATACCCTTGGCGATGCCCACCTTTATAATAACCATATTGA 13730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989453063502285