Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq19 286 5e-72 >seq19 Length=879724 Score = 286 bits (316), Expect = 5e-72 Identities = 1029/1587 (65%), Gaps = 32/1587 (2%) Strand=Plus/Minus Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 ||| || ||||||| ||||| || || | ||||||| | || ||| | || ||| Sbjct 585919 GCAGCGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCACTTTCA 585860 Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591 ||||| || | || ||||| || ||||| ||||| || ||||| | ||| | ||| Sbjct 585859 AATGGTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTGGT 585800 Query 65592 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 65651 || || | | | || || ||| |||||| | |||||||||||| ||| |||||| Sbjct 585799 CTGTGGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATAATT 585740 Query 65652 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 65711 ||||| || || | | | | ||||| | | ||| || |||||| | | Sbjct 585739 TTATTCAGGTTCAGGGTAGCCTGATAGGTTACATCATATAATTTCTGATGATCAAA-CTC 585681 Query 65712 TCATCT-ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT- 65769 || | || ||||| | ||| || | || ||||| ||||| || || ||||| | Sbjct 585680 TCCGTTGATGACAAATCTTGGCAAAGCCAACGAGGCCAGGTTACATACAGCAACCTCGTC 585621 Query 65770 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 65828 | | | | ||| | ||| || || || ||||| || || ||||||||||||||| Sbjct 585620 TTTGGAA--GTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGTTCCTAAA 585563 Query 65829 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 65888 ||||| || || || |||| ||||| ||||| | | | || || || ||| Sbjct 585562 TTTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGTTCCGGTT 585503 Query 65889 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT---- 65944 |||||||| || || | ||| || ||| | || | || |||| || | ||| Sbjct 585502 TCAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGC-TTTA--ATGGTTTTACGG 585446 Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004 | | || || || ||||||| | ||| || ||||| || | || || || | Sbjct 585445 GCACGTCCTT-CTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCA-AAGCAAT 585388 Query 66005 GT-CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 66063 | ||| ||| || ||||| ||||| | || ||| ||||||| || | || | Sbjct 585387 CTGCCAGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTCTACCC 585328 Query 66064 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCC 66122 | |||| || || ||| | |||||| || ||| ||||||||||||| | | |||| Sbjct 585327 TTCTCATGAACAGGTCACATACCCAAAGGGC-ATAGAATAAATCTCTGGCACGAAGTTCT 585269 Query 66123 TCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAATATCATAATGCCACGGT 66179 || || || || |||||| || || || || || | ||| |||||| || Sbjct 585268 TCTTTACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGCCATGGC 585212 Query 66180 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 66239 |||| ||| ||||| | | | || ||||| ||| ||||| || | || | ||| Sbjct 585211 TCCAGGTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGGCG 585152 Query 66240 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAG 66299 || | ||| | ||| ||||||| || | ||| |||||| || || || || || Sbjct 585151 GTATCGTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCACCA 585092 Query 66300 ATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 66359 ||||| ||| | ||||| || ||| || || ||| || || ||||| ||| Sbjct 585091 ATATAAGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTTGT 585032 Query 66360 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 66419 || ||| ||| | ||||||| ||||| || || || || ||||| || ||| |||| Sbjct 585031 GAAATTTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCATG 584972 Query 66420 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 66479 | |||| ||| ||| ||||||||| | | || | ||||||||||| || || Sbjct 584971 GTCAGTAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTGGG 584912 Query 66480 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 66539 | || ||||||||||| ||| | || || ||||| |||| || || ||| Sbjct 584911 GTTGCATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTTTCAATA 584852 Query 66540 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 66599 || || ||||| ||||| || |||||||| |||| || || || | ||| || || Sbjct 584851 TCTTCTTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCTACAAT- 584793 Query 66600 TTGTTGTT-TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 66658 |||| || |||||||| || ||||||||||| | |||||||| |||||||| | | | Sbjct 584792 TTGTCCTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATAATCGAA 584733 Query 66659 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 66718 | ||| || | || |||||||| || || | || || || || | || Sbjct 584732 TCCAAAATCCCTGTCATAAATAATGGTGCTGTCCAGAATCTCTGCATTTTCTTTGATCAC 584673 Query 66719 ATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTT 66778 ||| | || ||| | | || | ||| | |||| | || |||||||| Sbjct 584672 CTCCCAAACATCGTCTGCAATCAGTGAAGCAGATTTGTCTGTTTTGGAATCCACATAGTT 584613 Query 66779 GAATAAATC--CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 66836 ||| | | |||||| || || ||| | || | ||||| ||||| ||| Sbjct 584612 --ATACAGCATCTCCATGGTTTTGGAGAAAGATTTCGTGGTGTTCTTGTGCAGATTAGAT 584555 Query 66837 ACGGCTATTCTAG-CGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 66895 || || || | | | | ||||| |||||||| ||||| | || || | ||||| Sbjct 584554 ACCGCAATACGGGAAGCCAATAAT-GCATAATCAGGATGCTTGGTGGTCAGCGAAGCTGC 584496 Query 66896 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGAT 66955 |||| || ||||| | |||| |||| || ||||| |||| || | |||| || Sbjct 584495 CGTTTCCGCAGCCAGGTTATCCAGTTCTGAGGTGGTTACCCCATCGTACAAACCTTCAAT 584436 Query 66956 AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTT 67015 ||||| | || | | ||| ||||| | | || | || |||||||| || | || Sbjct 584435 TACCTTTTTCGCCACATCAATCGGATCCACCAGTTCTGCATTAAAGCCATAGCAGAGCTT 584376 Query 67016 TCTAATACGAGATGTGATTTTATCAAA 67042 | |||||| | || |||||||| || Sbjct 584375 TTCAATACGGGCGGTTATTTTATCGAA 584349 Score = 210 bits (232), Expect = 3e-49 Identities = 577/877 (66%), Gaps = 9/877 (1%) Strand=Plus/Minus Query 35865 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATAT 35924 ||||||| || |||||||||||||| || || ||||| ||||| |||| | || || Sbjct 584135 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 584076 Query 35925 TTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAA 35984 | ||||| ||||| || |||||| | ||| ||| ||||| || | |||| ||| | Sbjct 584075 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 584016 Query 35985 TCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 36044 | |||| ||||| ||||| || ||||| | ||||| || |||||| || || | Sbjct 584015 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 583956 Query 36045 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104 | ||| || | || | |||| |||||| | ||| || |||||||| |||| Sbjct 583955 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 583896 Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | || ||| | ||| || || | |||| | | || || || | Sbjct 583895 TTCCATGAACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGGCAA 583836 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | || || || | ||||| ||||| ||| || || || ||| || || || |||| Sbjct 583835 ATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTGGCA 583776 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA-AAGAAAATTCCT 36283 | ||||| | ||||| | ||| || || || || | | ||| | |||||||| ||| Sbjct 583775 TCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGAAGAAAATGCCT 583717 Query 36284 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCACTTT 36343 || ||||| || || || | | | || || || | | ||| ||||| Sbjct 583716 TCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA---ATCCAGCGC 583660 Query 36344 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 36403 ||||| || || || || ||||||||||| | ||||||| |||| || || | Sbjct 583659 AATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACAGCCTG 583600 Query 36404 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 36463 | |||||| | | |||||||| ||| ||||| |||| || ||| |||| || || Sbjct 583599 TCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAGAGTGG 583540 Query 36464 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 |||||||| || || || || || || ||||| | || |||| || ||||||||| Sbjct 583539 ATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTACTTC- 583481 Query 36524 GTACAAAATCGTT--CTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 36581 | || | ||| |||| | |||||||| || || |||||||| || |||||||| | Sbjct 583480 GCTCATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAAAAAG 583422 Query 36582 CCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATAT 36641 | | || ||| || |||| ||| || ||| || | ||| | || | Sbjct 583421 CAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTCTGGT 583362 Query 36642 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 36701 | | ||| | || | |||||| | ||||| || ||| || ||| |||||||| | Sbjct 583361 CATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATACATTT 583302 Query 36702 TCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 |||||| ||| | |||| ||| || |||| |||||| Sbjct 583301 CCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 583265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658087838118680