Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq19 311 1e-79 seq1288 154 2e-32 >seq19 Length=879724 Score = 311 bits (344), Expect = 1e-79 Identities = 1030/1586 (65%), Gaps = 38/1586 (2%) Strand=Plus/Minus Query 79355 CGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATG 79414 || ||||||| ||||| ||||| | ||||| | | || ||| || || ||||||| Sbjct 585915 CGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCACTTTCAAATG 585856 Query 79415 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 79474 | || | || ||||| || ||||| ||||| || ||||| | ||| | ||||| | Sbjct 585855 GTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTGGTCTGT 585796 Query 79475 GTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534 | | | | || ||| ||| |||||| | |||||||||||| ||| |||||||||| Sbjct 585795 GGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATAATTTTAT 585736 Query 79535 TGAGATTCCTGA----CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGT 79590 | || ||| | || || || ||||| | || ||| || |||||| | Sbjct 585735 TCAGGTTCAGGGTAGCCTGATAGGTT----ACATCATATAATTTCTGATGATCAAACTCT 585680 Query 79591 CCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT-- 79648 || | || ||||| | ||| || | || ||||| ||||| || || ||||| | Sbjct 585679 CCGTTGATGACAAATCTTGGCAAAGCCAACGAGGCCAGGTTACATACAGCAACCTCGTCT 585620 Query 79649 TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAAT 79708 | | | | ||| | ||| ||||| || || ||||| || || ||||||||||||| Sbjct 585619 TTGGAA--GTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGTTCCTAAAT 585562 Query 79709 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTT 79768 |||| || || || |||| ||||| ||||| | | | || || || |||| Sbjct 585561 TTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGTTCCGGTTT 585502 Query 79769 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAG-ACTTGTAT 79827 ||||||| || || | ||| || ||| | || | || || || | || | | Sbjct 585501 CAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGCTTTAATGGTTTTACGGGCAC 585442 Query 79828 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCT 79887 || || || ||||||| | |||||| ||||| || | || | ||| | Sbjct 585441 GTCCTT-CTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCAAAGCAATCTGCC 585383 Query 79888 AATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTC 79947 | ||| || ||| | |||||| | || ||| ||||| | || | ||| | | || Sbjct 585382 AGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTCTACCCTTCTC 585323 Query 79948 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTT 80006 || || || ||| | |||||| || ||| |||| |||||||| | | | || || || Sbjct 585322 ATGAACAGGTCACATACCCAAAGGGC-ATAGAATAAATCTCTGGCACGAAGTTCTTCTTT 585264 Query 80007 TCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 80063 || || |||||| || || || || || | ||| | |||||| || |||| Sbjct 585263 ACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGCCATGGCTCCAG 585207 Query 80064 GTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 80123 ||| ||||| | | | || ||||| ||| ||||| || | || | ||||| | Sbjct 585206 GTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGGCGGTATC 585147 Query 80124 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 80183 ||| | ||| ||||||| || | ||| |||||| || || || || || ||||| Sbjct 585146 GTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCACCAATATA 585087 Query 80184 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 80243 ||| ||||||| || ||| || || ||| || || ||||| ||| || || Sbjct 585086 AGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTTGTGAAAT 585027 Query 80244 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAG 80303 | ||| | ||||||| ||||| || || || || || || || || |||| | || Sbjct 585026 TTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCATGGTCAG 584967 Query 80304 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 80363 || ||| ||| ||||||||| | | || | ||||||||||| || || | || Sbjct 584966 TAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTGGGGTTGC 584907 Query 80364 GTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCA 80423 ||||||||||| ||| || || || ||||| |||| || ||| ||||| Sbjct 584906 ATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTTTCAATATCTTC 584847 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483 || ||||| ||||| || |||||||| |||| || || || | ||| || || |||| Sbjct 584846 TTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCTACAAT-TTGTC 584788 Query 80484 ATT-TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 80542 || |||||||| || || |||||||| | |||||||| |||||||| | | || || Sbjct 584787 CTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATAATCGAATCCAA 584728 Query 80543 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT---CCTTATATTTGTTAAC--TAC 80597 | || | || |||||||| || || | | | || | |||| | || | Sbjct 584727 AATCCCTGTCATAAATAATGGTGCTGTCCAGAATCTCTGCATTTTCTTTGATCACCTCCC 584668 Query 80598 ATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 80657 | ||| || || ||| | | || | ||| | |||| | || |||||||| Sbjct 584667 AAACATCGT-----CTGCAATCAGTGAAGCAGATTTGTCTGTTTTGGAATCCACATAGTT 584613 Query 80658 GAATAAATC--CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715 ||| | | |||||| || || ||| | || | |||||| ||||| ||| Sbjct 584612 --ATACAGCATCTCCATGGTTTTGGAGAAAGATTTCGTGGTGTTCTTGTGCAGATTAGAT 584555 Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCT 80775 || || || | || || || | |||||||| ||||| | || || | ||||| Sbjct 584554 ACCGCAATACGGGAAGCCAATAATGCATAATCAGGATGCTTGGTGGTCAGCGAAGCTGCC 584495 Query 80776 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 80835 |||| || ||||| | |||| |||| || ||||| |||| || | |||| || Sbjct 584494 GTTTCCGCAGCCAGGTTATCCAGTTCTGAGGTGGTTACCCCATCGTACAAACCTTCAATT 584435 Query 80836 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 80895 ||||| | || | | ||| ||||| | | || | || |||||||| || | ||| Sbjct 584434 ACCTTTTTCGCCACATCAATCGGATCCACCAGTTCTGCATTAAAGCCATAGCAGAGCTTT 584375 Query 80896 CTAATACGAGACGTGATTTTATCAAA 80921 |||||| | || |||||||| || Sbjct 584374 TCAATACGGGCGGTTATTTTATCGAA 584349 Score = 248 bits (274), Expect = 1e-60 Identities = 583/876 (67%), Gaps = 7/876 (1%) Strand=Plus/Minus Query 49667 ttttttGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATAT 49726 ||||||| || |||||||||||||| || || ||||| ||||| |||| || || || Sbjct 584135 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 584076 Query 49727 TTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 49786 | ||||| ||||||||||||||||| ||| ||| ||||| || | |||| ||| | Sbjct 584075 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 584016 Query 49787 TCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 49846 | |||| || || ||||| || ||||| | ||||| || |||||| || || | Sbjct 584015 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 583956 Query 49847 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 | ||| || | || | |||| |||||| | ||| || |||||| || |||| Sbjct 583955 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 583896 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | |||| ||| | ||| || || | |||| | | || || || | Sbjct 583895 TTCCATGAACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGGCAA 583836 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | || || |||| ||||| ||||| ||| | || || ||| || || || |||| Sbjct 583835 ATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTGGCA 583776 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | ||||| | ||||| | ||| || || || || ||| ||||| || |||| Sbjct 583775 TCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAAGCTCCCGCTGAAGAAAATGCCTT 583716 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTT 50146 | |||||||| || || || | | || || || | ||| ||| ||||| Sbjct 583715 CCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA---ATCCAGCGCA 583659 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 ||||| || || || || ||||||||||| | ||| |||| ||||| || || || Sbjct 583658 ATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACAGCCTGT 583599 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266 |||||| | | |||||||| ||| |||||||||| || ||| |||| || || | Sbjct 583598 CTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAGAGTGGA 583539 Query 50267 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 50326 ||||||| || ||||| || || || ||||| | || |||| || ||| ||||| | Sbjct 583538 TGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTACTTC-G 583480 Query 50327 TACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384 || | ||||| || | |||||||| || || |||||||| || |||||||| || Sbjct 583479 CTCATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAAAAAGC 583421 Query 50385 CAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATC 50444 | || ||| || ||||| ||| | ||| || | ||| | || || Sbjct 583420 AAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTCTGGTC 583361 Query 50445 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 50504 | ||| | || | |||||| | ||||| || ||| || ||| |||||||| | Sbjct 583360 ATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATACATTTC 583301 Query 50505 CCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 |||||| ||| | |||| || || |||| |||||| Sbjct 583300 CCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 583265 >seq1288 Length=22276 Score = 154 bits (170), Expect = 2e-32 Identities = 394/591 (67%), Gaps = 9/591 (2%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 || ||| || || |||||||| || |||||||| | || || || ||||| || || || Sbjct 677 CAGACAGGCAAAGTCGCAGTGGAGGCCCTCGTCGCGGCTGATCAGCTCGTTCGAGAAGGT 618 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAAA 50074 ||| ||| |||| ||||| ||||| || ||||| || || || ||| || || || || | Sbjct 617 GAGGCCGTGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGA-GCAGAACGAGCCCGAGA 559 Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT-GTCA 50133 ||||||| || || || |||||||| || || || | ||| || | ||| ||| || Sbjct 558 AGAAGATGCCCTCGACGGCGGCAAACGCGACGAGGCGCTCGGCAAAGCTG-CGCGAGTTT 500 Query 50134 TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193 | ||||| ||||| ||||||||||| || || ||||| || ||||| Sbjct 499 TCGATCCAGCGGATCGCCCACTCGGCCTTCTTGCGCACGGCGGGGATCGTCTCGATGGCG 440 Query 50194 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 || ||||| | | || | || || | || || ||||||| ||||| ||| Sbjct 439 TTGAAGAGCTGGGCCTTGCGCGCGGTGTCCTTGATGTAGGTGTCGATCAGCAGACTGTAC 380 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 | || || || |||||||| ||||| || || || |||||||| || | ||||||| Sbjct 379 GTCTCGGAGTGGATGTTTTCGATGGCGATTTGGAAGCCGTAGAAGCAGCGCGCCTCGGGG 320 Query 50314 ATCTGCACTTCTGTACA-AAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 || ||||| || | ||| || || || | || || || || || ||||| || Sbjct 319 ATTTGCACCTC-GGACATGAAGCGCGTGGCGAGGTTCTCGTTGACGATGCCGTCCGACGC 261 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT---TATT 50429 ||||| || || | || | | ||||| || |||||| | || | | | Sbjct 260 CGCAAAGAAGGCGAGCACGTTGGTGATAAAGTGGCGCTCGTTGTCGTTGAGCTTGGTGTC 201 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| || || || | | || | || ||| | ||||| || || ||||| || Sbjct 200 CCAGTCGGAGAGGTCGCCCGCGAGGTCGATCTCCTCCGCCGTCCAGAACGACGCCTCGGC 141 Query 50490 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||| || ||||| |||||||||| | || | ||| ||||| | ||||| Sbjct 140 CTTCTTGTACATGCTCCAGATGTCGGGGTACTTGATAGGGAACAAGACAAA 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718176080476280