Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq374 87.8 1e-12 >seq374 Length=102525 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | | || | |||| |||| |||||| || | ||||||||||| Sbjct 875 CCTCCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCGGAA 816 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || |||| || | || ||||||||||| || | ||||||||||||| || Sbjct 815 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGTTGATCGGGGGGA 756 Query 43003 ACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAG-CCTCGA 43060 | || || || || ||| | || ||||| | ||| ||||| | || |||| | Sbjct 755 ATGCCCTCCTTGTCTTGAATCTTAGTC-TTGACGTTCTCAATGGTGTC-CGAGCCCTCAA 698 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || | || ||||| ||||| || || || || || ||||||||||| Sbjct 697 CCTCCAGAGTGATAGTCTTTCCAGTGAGGGTCTTTACGAAAATTTGCAT 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381321600702966