Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq9756 95.1 3e-15 >seq9756 Length=505 Score = 95.1 bits (104), Expect = 3e-15 Identities = 280/419 (67%), Gaps = 27/419 (6%) Strand=Plus/Minus Query 18941 GAGCTGGACCAGTACGAAGACGCTGAGCTGGTCCGTAAGAAAACCGCTGCGTTGTTTGCC 19000 || || ||||||||||| ||||| ||||| || || ||||||||||| ||| |||| || Sbjct 505 GAACTCGACCAGTACGACGACGCCGAGCTCGTGCGCAAGAAAACCGCCGCGATGTTCGCG 446 Query 19001 GCCTTCATTCAAGAGGC----AACGGCAGACAGTACCGGA-GGGCCAACGATTGGTCAGC 19055 | |||||| || | | | | | | |||| ||| || ||| || || || | Sbjct 445 GGCTTCAT-CACGCGCCTGTCACCCGAGGACA--ACCTGATGGGTGAAGGACTG-----C 394 Query 19056 CGAAGCGAAGCAAAGGTGG-GAAGCGAATCACCGGCCTCAACCCCGGTACGTTGCAATAC 19114 || || || | |||| | |||| | |||| || | || || ||| |||| | Sbjct 393 CG----GATGCCA--GTGGTGCAGCGT-TGGCCGGGCTGGAGCCGGGCACGATGCAGATC 341 Query 19115 CTGCAACCAGGGCAGGAAGTGAAGTTCTCAAACCCTGCTGATGTGGGGACAACCTATGAA 19174 ||| | || || |||| ||||||||| | ||||| || ||||| | | ||| | Sbjct 340 CTGGAGCCTGGCGAGGACGTGAAGTTCAGTCAGCCTGCCGACGTGGGTGCGAGCTACG-- 283 Query 19175 CCG--TGGCTCCGGTACCAGCTGCTTAGCATTGCTAAGGGCTATGG-CATCACTTACGAG 19231 ||| | || || ||| | | || || | ||| |||| |||||| |||||| Sbjct 282 CCGAATTCCTGCGCATGCAGTTCCGG-GCGGTGGCAGCGGCGATGGGCATCACCTACGAG 224 Query 19232 ATGCTGACCGGAGATTTGCGAGGTGTGAACTACTCCAGTATTCGCGCCGGGCTCCTTGAG 19291 |||||||||||||| || ||||||||||| || || |||||||| || ||| Sbjct 223 ATGCTGACCGGAGACCTGACGCAAGTGAACTACTCGTCGATCCGGGCCGGGCTGCTGGAG 164 Query 19292 TTCCGTCGCCTCTGCCAGCAGGTTCAGCACCACATGATCATTCACCAGTTCTGTCGGCC 19350 || || |||| ||| || | |||||| | ||||| | |||||| | || || || Sbjct 163 TTTCGCCGCCGCTGTGAGGCCATCCAGCACGGCGTGATCGTCCACCAGCTGTGCCGCCC 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138095062893840