Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq98 273 4e-69 seq353 93.3 8e-15 seq5470 89.7 1e-13 >seq98 Length=166217 Score = 273 bits (302), Expect = 4e-69 Identities = 1120/1737 (64%), Gaps = 69/1737 (4%) Strand=Plus/Minus Query 1052 TGACCGGCGGCTCATACCATCTGCCGTTACTGATGCATTCGACGTAATCCAGAATGTCAC 1111 ||||||||||||| || | | ||||| | |||||||| ||| || || ||| | | Sbjct 137191 TGACCGGCGGCTCGTAGTAGCGCCCGTTGCGCCAGCATTCGAGGTAGTCGAGGATGCCGC 137132 Query 1112 GGCGGTCGAGTACCGGCACCGGCTCGCCAAAGGTGAATGCCTCCATTTTCGGGGCGCTGG 1171 | || || |||||| |||||| || || ||||| || || || |||| ||| Sbjct 137131 GCGATTCCAGCACCGGCGTCGGCTCCCCGAACGTGAACGCTTCGAT-----GGGCCCTGC 137077 Query 1172 CGGTCATTGTTTTTGCCGCAGGTTGCGGTGTTTTCCCTTTTT--TCTTGCTCATCAGTAA 1229 ||| ||| ||| || | | |||| | | | | ||||||| || Sbjct 137076 CGG-------------CGC-GGTGGCAGCG----CCCTGGTCGGTGTCGATCATCAGAAA 137035 Query 1230 AACTCCAGAATGGTGGATGTCAGCGGGGTGCTGATACCGGCGGTGAGTGGCTCATTTAAC 1289 | ||||| ||||| | ||||| || | ||| | ||| || || || | Sbjct 137034 ATCTCCA---TGGTG-----CTGCGGGCGGCGGCG-CCGCCTTCGAGCGGTTCGTTCTGC 136984 Query 1290 AGGGCGTGCATGGTCGCCCAGGCGAGGTCGGCGTGGCTGG-CTTCCTCGCTGCGGCTGGC 1348 ||||| |||| |||||| || || |||||||||| || | | | || ||| | || Sbjct 136983 AGGGCATGCAGCAGCGCCCACGCCAGATCGGCGTGGCCGGTCGTGCGCGA-GCGCCCCGC 136925 Query 1349 CTCATAGGTGGCGCTG-CGTCCGCTGCTGGTCATGGTCTTGCGGATAGCCATAAACGAGC 1407 | ||||||| ||| || |||||| || ||||||| |||| || | | ||| Sbjct 136924 CGTGTAGGTGGT-CTGTCGGCCGCTGGCCGTGCTGGTCTTCTGGATGGCAAGCAGCGACT 136866 Query 1408 TGGTGATGTCGGTGGCGCTGACGTCATATTCCAGACAGCCACGGCGGATAACGTCTTTTG 1467 ||| |||||||| || | ||||||||||||||| | ||| || || | Sbjct 136865 GGGTCATGTCGGTCCAGCCGGCGTCATATTCCAGACGCTCGTTCTTGATGACATCGAACG 136806 Query 1468 CCTTGAGCACCATTGCGGTTTTCATTTCCGGTGTGTAGCGGATATCGCGCGCGGCAGGAT 1527 |||||||||||| || |||| || || | ||||| || | | | || Sbjct 136805 CCTTGAGCACCAGCCGCGTCTTCACCTCGGGCGAGTAGCTGAAGGTGGTCAACCCCGGGA 136746 Query 1528 AGAACGAGCGCACGAGCTGGAACACGCCGACACCGAGGCCGGTGGCATCAATACCGATGT 1587 ||||| ||| || |||||| ||| ||| || | ||||||||| || || ||||||| Sbjct 136745 AGAACTGGCGGACCAGCTGGGCCACACCGGTGCCCATGCCGGTGGCGTCGATCCCGATGT 136686 Query 1588 ATTCGACGTTATATTTTTCGGTGAGTTTGCGGATGGATTCAGCCTGGGTGGCAAAGTCCA 1647 | ||| || | ||||| || |||| | | |||||| || ||||||| Sbjct 136685 AGGTGACCCAGTAGCGCTGGGTGACCTTCTGGATAAACGCCGCCTGGTCAGCGAAGTCCA 136626 Query 1648 TGCCTTTCCACTGGTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACCACCGGCGGTG 1707 |||| || ||||||||||||| || | | ||| |||||||||| ||| ||||| | Sbjct 136625 TGCCCTTGAACTGGTGACGCTCCAGCACGCGGAACTTGCCACCGGGCACTTGGGGCGGCG 136566 Query 1708 CCAGTACCACGCATCCGGCACTGTCGCCACGGTGTGACGGGTCGTAACCAATCCATACCG 1767 ||| | |||| ||||| |||||||| | | ||||||||| |||||||| |||| Sbjct 136565 CCACAATCACGATGCCGGCGCTGTCGCCCGTCTCGGCCGGGTCGTACCCAATCCACACCG 136506 Query 1768 GGCGGGAGCCGAACGGATTGGCGGCAAAGGG--TGCA-TAGTCTTCCCA-TTCTTCCAGC 1823 |||| ||| | || ||| ||||| || | | | | |||| | | ||||| Sbjct 136505 CGCGGTCGCCATATGGGCGCATGGCGAAGGGGCTGAACTCGCCGGCCCACTCCACCCAGC 136446 Query 1824 GTGTCGACCATGCAGCGTTGCAGC-TCCTCGAACGGGAACACCGATGCCTTGTCGTCAAC 1882 |||| ||| ||| | |||||| || || | ||||||||| || ||||||| || Sbjct 136445 -TGTCCACCTGGCACGGCTGCAGCATCGTC-AGCGGGAACACGCTGGCGCTGTCGTCCAC 136388 Query 1883 AAATTCACACATGAACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTGAGCTGCTC 1942 || || ||||| | |||||| || || |||||||||| ||||| |||| | Sbjct 136387 GAACTCGCACATCAGCAGGTTGGCGAATTCCTCGGCGCTGTAATCGCGCCGCAGCTCGGC 136328 Query 1943 AATGTCGAACAGCGTGCAGCCGCCTTTCAGGGCGTCCTCAATGGTGACAATCTGCCGCCA 2002 | |||||||| ||| || | | ||||| | ||||| ||||||||||| Sbjct 136327 CACATCGAACAGATCGCACCCTCGGTCGGCCGCGTCGAGCACTGTGACGATCTGCCGCCA 136268 Query 2003 CTGGCCGTCCGCACAGAGAAGACCTCCGGCAAGGGCGTTATGACTGACGTCGATTTCCAC 2062 ||||| | ||| | | || | | | || | || ||||| |||| || | Sbjct 136267 GATAGCGTCCTCGCAGCGTCGGCCACTGCCCAGCCGGCCGTGGCTGACATCGA--TCGAT 136210 Query 2063 GCGTTCGGCGGCGCTGGCGCGTCCCCGGTTGAACAGTTCACCCGACCAGAACGGGTAGGC 2122 | | | | | | ||| | ||| |||||| | || || | |||||| |||||| Sbjct 136209 ACCTGCTGGGAGGTCGGCTTG-CCCTTGTTGAAGCGCTCGCCTGTCCAGAAATCGTAGGC 136151 Query 2123 GTCGTGCGCCAGCGTGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGGCTCTGTGAGGC 2182 |||||||||| ||||| || ||| ||| |||||| |||| | | || || Sbjct 136150 TTCGTGCGCCATGGTGGAAGGCGTGCTGAAGTAGGTCTTGCGCCATTTCTTGTGCATCGC 136091 Query 2183 CATACCTGATGCCACCTTACGCAG-TACCTGAAAATTCGGGATCCAGAAAATCTCGTCGA 2241 ||| || || ||||| ||| | |||| || ||||||| | ||||||| Sbjct 136090 CATGCCGCTGGCGACCTTGTTCAGCTGGTTGAAGCCGTAGG-TCCAGAAGAATTCGTCGA 136032 Query 2242 CGTACAGGTCGCCGTTATGGCTCTGTGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTT 2301 ||| | | |||| | || ||| |||||| | ||||||||| ||||| | ||| | Sbjct 136031 AGTAGAAATTCCCGTGGTAGCCCTGCGCGGTGCGTGCGTTGGTGCCCAGAAAGAACAGCT 135972 Query 2302 TTGCGCCGTTATTGCCCAGGACAATCGGGTCACCGGTCAGGTCAACGTCAACCA-GACGG 2360 |||||| ||| ||||||| || || || ||||| ||||| ||| | || || Sbjct 135971 CAGCGCCG---TTGGCCAGGACGATGGGATCGCCGGTGAGGTCCCGGTCCAGCACCTCGC 135915 Query 2361 GCA--AAGGCGATGATGTATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAA 2418 ||| ||| | ||||| | |||| | | |||||| | || || ||| | Sbjct 135914 GCACGAAGCCACGCATGTAGCCCAGGAAGATGTGCGCCTGACTCTTGGATGCGCTCAGGA 135855 Query 2419 AAATCTGGTTATGACCGGTTTTCAGGGCACGCAGCAGCGCCTCGCGGGAAAAATAAAACG 2478 | ||||| || | ||| | |||| || | |||||||||||||| ||| || | | Sbjct 135854 AGATCTGATTGCGGCCGCTGATCAGCGCGTCGATCAGCGCCTCGCGGGCAAAGTAGTAGG 135795 Query 2479 TCGCGCCAATCTGGCGGGATTTCAGGATATCTCGGATGCGGTGCTCAAGCCCGGCGCGAT 2538 | ||||| ||||| || || || ||||| | || | | |||| |||||||| | Sbjct 135794 TGGCGCCGATCTGCCGCGACTTGAGGATCACGCGCGTCC---GCTCGCTGCCGGCGCGGT 135738 Query 2539 ACCAGTGCAACTGATATTCGAAAGACTGCTCAAAGAAAATCTGCTCCAGCTTTTCGATGG 2598 |||| | ||| || ||||| || || | ||| ||| |||| ||| | Sbjct 135737 ACCAATCGCGCTGGTAATCGAAGCACCCGTCGAGGAACGCCTGGCGCAGCCGTTCCACTT 135678 Query 2599 CCTCGTCACTGAAAAAATTCTTTTTCGG----TTTGCGACGCCCGCCTTTGTTGCGGTTA 2654 |||| || ||||| ||| || ||| | | | || ||| ||||||||| Sbjct 135677 CCTCTTCGCTGAACTCGTTC--TTGCGGGCCTTCTTCTTCG--GGCCAGCGTTGCGGTTG 135622 Query 2655 GCGACGTTCGGATTAAGGTCTGCCTCGTTGCCGGTCTGACT-GTAGCGGTTGACCCGTGC 2713 ||||| || || ||||| ||||||||||| | | || ||| || | || || || Sbjct 135621 GCGACCGCTGGGTTCAGGTCCGCCTCGTTGCC-GCCGCCCTGGTAACGCTGGATGCGGGC 135563 Query 2714 CAGTCGTTCAATCTGGCGTCCCAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTT 2770 | | || || | ||| || ||||||||| || || |||||||| |||||||| || Sbjct 135562 CTGCCGCTCCAGCTGCCGATGCAGCAGGTCGATCTCTTTGAAGTCGCCGCCGGTCTT 135506 Score = 215 bits (238), Expect = 1e-51 Identities = 756/1159 (65%), Gaps = 61/1159 (5%) Strand=Plus/Minus Query 16472 GACTATCATCATGGCGTGCAGGTGCTGGAGATTAACGACGGCACCCGCGTCATTTCCACC 16531 |||||||| || ||||| | || | ||||| |||| ||| |||| || ||| Sbjct 123814 GACTATCACCACGGCGTACGTGTCATCGAGATCAACGGCGGTGTCCGCCCGATCCGTACC 123755 Query 16532 GTATCCACTGCCATTGTCGGCATGGTCTGCAC-GGCCAGCGATGCGGATGCGGAAACCT- 16589 | |||| ||| | ||||||| || ||||| ||| || ||||| || || | ||| Sbjct 123754 ATCGCCACCGCCGTCATCGGCATTGTTTGCACCGGCGAG-GATGCCGACGCC--ACCCTG 123698 Query 16590 -TCCCTCTCAATAAACCGGTGCTGATTACCAATGTGCAGAGCGCAATTGCAAAGGCCGGT 16648 |||| ||||| |||||||||| | || | |||| | | || |||| ||||| || Sbjct 123697 TTCCCGCTCAACCGACCGGTGCTGCTGACTGACGTGCTGGGGGCTATTGGCAAGGCTGGC 123638 Query 16649 AAAAAAGGCACGCTGGCGGCGTCGTTACAGGCCATCGCTGACCAGTCAAAACCGGTCACC 16708 | ||||| ||| | |||| |||||||| || |||||| | || | |||| Sbjct 123637 ACCGCCGGCACCCTGCGCCCCACGTTGCAGGCCATTGCCGACCAGGCTAACGCCATCACG 123578 Query 16709 GTTGTTGTGCGCGTGGAAGACGGCACCGGCGACGACGAGGAAACGAAACTCGCGCAGACT 16768 || || |||||||||| || ||| | |||||| | || || ||| Sbjct 123577 GTCGTGGTGCGCGTGGCCGAGGGC---GTGGACGAC-----AGCGCCACCACCGC----- 123531 Query 16769 GTTTCCAATATTATCGGCACCACCGACGAAAACGGTCAGTACACCGGACTGAAAGCCCTG 16828 |||| | || || | | |||| || | |||||||| ||| | || ||| Sbjct 123530 -----CAATGTCATTGGTAAGAAGGACGGTG-CGACC--TACACCGGCCTGCAGGCGCTG 123479 Query 16829 ATGGGGGCTGAGTC---GGTTACCGGCGTTAAACCGCGCATTCTCGGCGTACCGGGACTG 16885 ||| | | || | ||| ||| || ||||| || ||||||| ||||||||| Sbjct 123478 CTGGTGTCCGAAGCCCAGGT---CGGGGTACGGCCGCGGATCCTCGGCGCGCCGGGACTG 123422 Query 16886 GACACCAAAGAGGTCGCCGTCGCACTGGCATCGGTAT-GCCAGGAA-CTGAATGCCTTCG 16943 |||||| | ||| ||| || ||||| || || |||| ||| ||| ||| | | Sbjct 123421 GACACCCAGCCGGTGACCGCTGCCCTGGC--CGTGATCGCCAAGAAGCTGCGGGCCATGG 123364 Query 16944 GGTATATCAGCGCATGGGGTTGTAAAACCA---TTTCCGAGGTGAAAGCCTACCGCCAGA 17000 || ||||| || | | | || || |||||| | || |||||| | Sbjct 123363 CCTACGTCAGC---TGCGCTGCCAGCGCCTCGGTTCCCGAGGCCATCGCTTACCGCGCGC 123307 Query 17001 ATTTCAGCCAGCGTGAGCTGATGGTTATCTGGCCGGATTTCCTCGCATGGGATACGGTTA 17060 | |||||| | || ||||||||| | ||| || || ||| | || | | || | Sbjct 123306 AGTTCAGCGACCGCGAGCTGATGTTGCTCTATCCCGACTTCGTGGCCTTCAACACCG--- 123250 Query 17061 CCAGT---ACCACCGCCACCGCGTATGCCACCGCTCGTGCGCTGGGTCTGCGCGCTAAAA 17117 || | ||||||| || || | || || || |||||||| || |||||||| | | Sbjct 123249 CCGATGCGACCACCGGCATGGCCTTCGCAACGGCACGTGCGCTCGGCCTGCGCGCCATGA 123190 Query 17118 TCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTGAACGGTGTTACCG 17177 |||| || |||| ||||||||||| ||||||||||||| | || ||| || |||| Sbjct 123189 TCGATGAGCAGCAAGGCTGGCATAAGTCGCTGTCCAACGTGGCCGTAGCCGGCGTGACCG 123130 Query 17178 GCATCAGTGCATCCGTCTTCTGGGATTTGCAGAAGCCAGGCACTGATGCTGACCTGCTGA 17237 ||||||| |||| ||||| ||||| | || | || || || | | |||| | Sbjct 123129 GCATCAGCCGGGACGTCCATTGGGACCTGCAGGATCCGGCGACCGACGCCGGCATGCTCA 123070 Query 17238 ACGAGGCAGGCGTCACAACGCTGGTTCGCCGCGACGGTTTTCGTTTCTGGGGTAACCGTA 17297 | | || | |||| |||||| | | | |||| | |||||||| || | Sbjct 123069 ATGCCGCCGATATCACCACGCTGATCAACTCCAACGGGTACAAGTTCTGGGGATCGCGCA 123010 Query 17298 CCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAGCTACACACGCACCGCGCAGGTACTGG 17357 ||||| ||||| |||||||| ||| || | || ||| ||||| |||||| | |||| Sbjct 123009 CCTGCAGCGATGAGCCGCTGTTTGCCTTCGAGACCTCCACCCGCACGGCGCAGATCCTGG 122950 Query 17358 CCGACACGATGGCTGAGGCGCACATGTGGGCTA--TTGATAAGCC-CATCACCGCAACGC 17414 ||||||| || || |||||| || ||| ||| | || ||||| | |||| | ||| Sbjct 122949 CCGACACCATCGCCGAGGCG--CAGTTGGTCTACGTCGACAAGCCGCTGCACC-CCTCGC 122893 Query 17415 TGATTCGCGACATCATTGACGGCATCAATGCCAAATTCCGTGAACTGAAAAACAACGGTT 17474 || | |||||||| | || |||||||| ||||| ||||| || ||| ||| ||| | Sbjct 122892 TGGTGCGCGACATGCTCGAAGGCATCAACGCCAAGTTCCGCGAGCTGGTGAACGCCGGAT 122833 Query 17475 ATATCGTGGATGGCACATGCTGGTTCAGCGAAGAATCCAACGATGC---GGAAACCCTCA 17531 | | | | | ||| ||||| | ||| | ||||| ||| | | | || Sbjct 122832 ACCTGCTCGGGGCCACGGCCTGGTACGACGAGGGCGCCAAC-CTGCCCACGCAGCTGTCC 122774 Query 17532 AGGCCGGAAAACTGTATATCGACTACGACTATACCCCGGTGCCTCCTCTCGAAAACCTGA 17591 || || ||| ||||||| |||||| ||||||||||| || || ||||||||| Sbjct 122773 AG--TGGTCGCCTGGCCATCGACTTCGACTACACCCCGGTGCCGCCGCTGGAAAACCTGC 122716 Query 17592 CCCTGCGCCAGCGTATTAC 17610 ||| |||||| || || Sbjct 122715 TGCTGAACCAGCGCATCAC 122697 Score = 82.4 bits (90), Expect = 1e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 582 GGCATCAGTGACGTACATGATATATCCGGCATGAGCGCCGTTTTCGTAATACTTGCGGCG 641 || ||| || | ||| | ||| | ||||| || | |||||| | ||| |||||||| || Sbjct 137661 GGAATCGGTCAGGTAGAGGATGAAGCCGGCGTGCGAGCCGTTGTTGTAGTACTTGCGCCG 137602 Query 642 GAACAGCGTGGCCGACTCATTCAGCCAGGCAGAGTTAAGGGCGCTGAGATATTCCGGCAG 701 |||||||||||||||||| || ||| || | | | ||| | | || ||||| Sbjct 137601 GAACAGCGTGGCCGACTCGTTGAGCAGCGCGGCCTGCACGGCCGGCATCCACTCGGGCAG 137542 Query 702 GCCGTACAGCTCCTGATTAATATCCGGCTCCAGCAGATGAAACAC 746 |||||||| |||||| | ||| | |||| |||| || |||| Sbjct 137541 GCCGTACACCTCCTGGTCTGCATCGGACTCCCGCAGCTGGTACAC 137497 >seq353 Length=102661 Score = 93.3 bits (102), Expect = 8e-15 Identities = 267/402 (66%), Gaps = 13/402 (3%) Strand=Plus/Plus Query 336 CCCGACGTTCTCCGGCTTGCCGCCCATCAACTGAAAGGGGATGCGGTGCGCGTCCAGCAG 395 |||| |||||| |||| | |||||||||||| || ||||| ||| | ||||| Sbjct 45064 CCCG-CGTTCTGCGGCACGATGCCCATCAACTGCGGTGGAATGCGCAACGCCGCGAGCAG 45122 Query 396 GTCAGCGGCGCTGGCTTTTTTGATATTaaaaaaaTCGTCCTTCGTTGCCACTTCACTGAG 455 || | |||| |||||||| || |||||||| | || || || || | Sbjct 45123 ATCGTCACGGCTGATGTTTTTGATCGAGCTGAATTCGTCCTTGGCCGCAACCTCGCTCAC 45182 Query 456 CGGGATAATTTTGATGCCGTCGGCTTTCC--CCTGTGGG-GCATAGAGAAACAGATTTTT 512 |||||| | | |||||||| |||| |||| || || || | |||||| || Sbjct 45183 CGGGATGAGCTGAATGCCGTC---TTTCTTGCCTGCCGGCGCGTACACAAACAGGTTGCG 45239 Query 513 AAAGTTGTTGCGGCCTTTCGACTTCACCA-TGTTTTCGCGGAGCATTTCGATATCGTTGC 571 ||||||| | |||||||| ||| || || | ||| || ||||| || | Sbjct 45240 AAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCGGT-GCGCAGTGAGTCGATGTCCTCTT 45298 Query 572 GATCCTGCACGGCATCAGTGACGTACATGATATATCCGGCATGAGCGCCGTTTTCGTAAT 631 | |||| | || || || | ||||| || | |||||||| |||||| | ||| | Sbjct 45299 CCTTCTGCGCCGCGTCGGTCATGTACAGAATGAAACCGGCATGGCTGCCGTTGTTGTAGT 45358 Query 632 ACTTGCGGCGGAACAGCGTGGCCGACTCATTCAGCCAGGCAGAGTTAAGGGCGCTG--AG 689 ||||||| |||||||||||||| ||| || ||| || || |||||| || Sbjct 45359 ACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAGCAGTGC--GCTTTGCAGCGCTGCCAG 45416 Query 690 ATATTCCGGCAGGCCGTACAGCTCCTGATTAATATCCGGCTC 731 | |||||||||||||| | ||||| || ||||| | ||| Sbjct 45417 CCACTCCGGCAGGCCGTAGATTTCCTGGTTGATATCGGCCTC 45458 >seq5470 Length=421 Score = 89.7 bits (98), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 12378 GAAAAAGGTTTTACT-CAGTTAAGCAGTGCAACAAACAGCACCAGTGAAAAGCTGGCGGC 12436 |||||||| || | ||| | |||||||| || |||||||| || |||||||| Sbjct 178 GAAAAAGGGGATAGTACAGCTCAGCAGTGCGACCAACAGCACTTCCGAGTCACTGGCGGC 119 Query 12437 AACGCCAAAAGCGGTCAAGGCAGCAAATGACAACGCAAATTCACGTCTGGCGAAAAATCA 12496 ||||||||| || || || ||||| ||||||| ||| | ||||||| |||| | || Sbjct 118 AACGCCAAAGGCAGTAAAAGCAGCCTATGACAATGCAGAGAAACGTCTGCAGAAAGACCA 59 Query 12497 GAACGGTGCAGATATCCAGGATAA 12520 |||||| || ||||| | ||||| Sbjct 58 GAACGGCGCTGATATACCCGATAA 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98195956446060