Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq504 109 5e-19 >seq504 Length=56252 Score = 109 bits (120), Expect = 5e-19 Identities = 111/142 (78%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 || |||||||| || |||||||| || | ||||| ||| || ||||| | | | Sbjct 35830 GAGGTTGCCCAAGTCTCCGACGTGGCGGACGTCGGCGGTGGGGGCTCCGTGCTCCTTGC- 35888 Query 21198 CGTAGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 || |||| || ||||| ||||||||||| ||||||||||| |||||||||| |||| || Sbjct 35889 CGAAGGGGTTGAAGTGGGCGCCGGCGGACATGCAGCCGTTGGTGGTGTCGCCAAACTGGT 35948 Query 21257 GAACGTGAAAGCCGTGCAGTCC 21278 | ||||| || ||||||||||| Sbjct 35949 GGACGTGGAATCCGTGCAGTCC 35970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414520621737838