Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq3870 105 7e-18 >seq3870 Length=345 Score = 105 bits (116), Expect = 7e-18 Identities = 193/280 (69%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 35581 ATCAGGGTAAAGACGCTTACTAGAACATTCCAATGCAAGTTGCTTAATGTCGTAGTTCGG 35640 ||| || || | ||||| || | || |||| || || || || |||||||||||||| Sbjct 299 ATCCGGATACATGCGCTTGCTTGCGCACTCCAGCGCCAGCTGTTTGATGTCGTAGTTCGG 240 Query 35641 ATCTTCTGGTTTAAGGTTTAATCCTTCTTCTAAGAAC-ATCACCAGCTTAGGAAACACCG 35699 ||| || |||| |||| | || || | || | | |||||| || || ||||||| Sbjct 239 ATCGCCTTTTTTATGGTTCAGACCATC-GCGAATCGCAAACACCAGTTTCGGGAACACCG 181 Query 35700 GAGTTATACCATCTTTACCTAAACCTTTAGTTCGAACTTTCAGGATCGCTTTCTGAATCA 35759 |||| ||| | |||||| | ||| | || |||||||| || |||||||| Sbjct 180 CAGTTTTACGGTTTTTACCGAGGCCTGCGATACGGTTACGCAGGATCGATTCCTGAATCA 121 Query 35760 GTTTTTCTTCCCAGCTAGTACCCATACCAAAGGTTAAAGTCACAAAAGGCGTTTGACCGT 35819 | ||||||||| || |||| |||||| || || ||||| ||||| ||||||| Sbjct 120 GGCGCGATTCCCAGCTGGTGCCCAGACCAAAACCAAAGGTTACAAACGGCGTCTGACCGT 61 Query 35820 TGGTGGAGAACAAAGTGTTGATCTCATATTCCAACGCCTG 35859 ||| || | || ||||| | || || |||| || ||| Sbjct 60 TGGCGGTGTGCAGGGTGTTTACTTCGTACTCCAGCGACTG 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524661863967760