Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq1120 100 8e-17 seq850 80.6 8e-11 >seq1120 Length=11421 Score = 100 bits (110), Expect = 8e-17 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 23717 CAAATTATGGCAGTCCAGGCGGAGCAGCTTTCGAGCTGGCCGGTATCCGTTGGGGCCGGT 23776 || || |||| |||| ||||| ||||| |||| |||||||||| ||| | ||||||| Sbjct 6682 CAGATAATGGTGGTCCGGGCGGGGCAGCCTTCGGGCTGGCCGGTTTCCTTGAAGGCCGGT 6741 Query 23777 ATTCCTACCTCCGTTTGGGCTGCCACCCCATAGAGTGTAGGAACTCTGGTGGTAGCA 23833 ||||||||| ||||| ||| ||| ||||| ||| |||||||||| |||||| ||| Sbjct 6742 ATTCCTACCCCCGTTCGGGTCACCA-CCCAT-GAGCGTAGGAACTCCGGTGGTGGCA 6796 >seq850 Length=28751 Score = 80.6 bits (88), Expect = 8e-11 Identities = 88/112 (79%), Gaps = 5/112 (4%) Strand=Plus/Minus Query 23722 TATGGCAGTCCAGGCGGAGCAG-CTTTCGAGCTGGCCGGTATCCGTTGGGGCCGGTATTC 23780 ||||| || ||||||| |||| | || | ||||||||| |||| || |||||||||| Sbjct 14941 TATGGTAGCTCAGGCGGGGCAGGCATTAGC-CTGGCCGGTTTCCGATGACGCCGGTATTC 14883 Query 23781 CTACCTCCGTTTGGGCTGCCACCCCATAGAGTGTAGGAACTCTGGTGGTAGC 23832 ||||| |||| |||||| || ||| ||| |||||||||| |||| |||| Sbjct 14882 CTACCCCCGTCTGGGCTATCA--CCAATGAGCGTAGGAACTC-GGTGATAGC 14834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148145030283774