Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq3870 93.3 7e-14 >seq3870 Length=345 Score = 93.3 bits (102), Expect = 7e-14 Identities = 211/316 (67%), Gaps = 1/316 (0%) Strand=Plus/Plus Query 8102 GATGCGTTTCAGACTTTTGAATACCAAGTCAATACAATGCAGACTTCAAATGGTCAGACA 8161 ||||| || ||| | | || ||| |||| || || |||| || | || |||||||| Sbjct 12 GATGCCTTCCAGTCGCTGGAGTACGAAGTAAACACCCTGCACACCGCCAACGGTCAGACG 71 Query 8162 CCATTCACGACAATCAACTTCGGTTTAGGTACTTCGTGGGAAGAGAAACTGATTCAGAAA 8221 || || || | || ||| | || || |||||| | ||||||||| || Sbjct 72 CCGTTTGTAACCTTTGGTTTTGGTCTGGGCACCAGCTGGGAATCGCGCCTGATTCAGGAA 131 Query 8222 AGCATTCTGCAAAATCGTATTGCTGGTCTAGGCAAGACTAAGAAAACTGCTATCTTCCCG 8281 || |||| || ||||| || || || || || | |||||||| | |||||| Sbjct 132 TCGATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGTTCCCG 191 Query 8282 AAACTTGTTTTCACGTTGAAAGACGGTGTTAACTTGAAAGAAGGTGATCCTTGTTACGGA 8341 ||||| || || || | || ||| | ||| ||| |||| ||||| |||| Sbjct 192 AAACTGGTGTTTGCGATTCGCGATGGTCTGAACCATAAAAAAGGCGATCCGAACTACGAC 251 Query 8342 ATCAAGAAGCTTGCTCTTGAGTGTGCAAGTAAACGCATGTACCCAGACATTTTGAACTAT 8401 ||||| |||| || || ||||| ||||| || |||||||| || || || ||||||| Sbjct 252 ATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATATCCTGAACTAC 311 Query 8402 GAAAAGCTAGTTGAAA 8417 || || ||| ||||| Sbjct 312 GATCAGGTAG-TGAAA 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783239680494480